Thiorhodovibrio frisius: Thiofri_00948
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Entry
Thiofri_00948 CDS
T09561
Name
(GenBank) cyanobacterial long protein repeat
Organism
tfri
Thiorhodovibrio frisius
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_3
DUF4347
Cadherin
Big_5
SWM_repeat
Laminin_G_2
Trypan_PARP
Laminin_G_1
Big_9
CopC
NikR_C
Motif
Other DBs
NCBI-ProteinID:
WPL20845
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All DBs
Position
907781..913999
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AA seq
2072 aa
AA seq
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MASATHQIAVIDRSVSDYQALATVAEQAGLEVILLSGQGDGVAELAAALQGSSGIEALHL
ISHGSAGQIQLGSAHLNNESLSEYSATLAQIGQSLTAEGDLLLYGCNVTEDDSGRAFIDE
LAQITGADVAASDDVTGSAAMGGDWVLEAAIGDIESPVLATAGFNGPLGDPNASPTIAIN
QALNFNGADDKIDLGAPLLPTSGSSHAMTLMAWMKPDNVSKDEQWFISQYDGVSDKRFIW
GIFDNKLCYFTPGNTILSNTTLTSGEWCHVAVVKESDGTITHYLNGVADGGGTNTSAFVD
VHTYIGGSGYPHPSISAFGNFDGALDEVSIWNTALDATAIQATMNTSLAGDETGLVAYYS
FDQDFGTALSDDSDSNPAYNGTLIDFGTPVTATGPLQQVVTEDEAGNLQFSGTPFADADG
NTLTVTLSVGEGSIAASSAGGVTVDDTNSAAVTFTGSVDNLNTFFTTAGNITYTSAAEPS
ANSQTLTISASDGNGGSDSATQDIIIRHNINEAPVFSSEATFTVDENTAEVGTVLAADNK
TNSALNLAATNDFAAVSGIDFSSDSVTIEGWFSFNDLTGQQNLLRLGSDSNTYLRIVPEK
LEDNKIAFFISDGANNNNDGAVVLVSGVSVVANEFYHLAFVYDNNGDSATASIHVNGQQV
ATQGLTEKIAFSADSYQMILATENNDQFNANVKINDFRIWNAARTEAEIQNNMNTELVGN
EAGLVAYYKMDETSGATLADSANDYNLAVTSGTETDLDATQSGDIMEYSIVETGADWDKF
TIDSSSGDLSLKTPADVETQDTYSLTVRATDSASGLSTDQSVTVNVTDVEEAPVISGTPT
DVEAEEDAITNLLFSGTPFADGDNDPLTVTLSVTEGTIDAPGDADGDGITVGGTATDRTF
AGSVADLNTFFTTEGKITYTSAENPTTDSQTLTISANDGNTTTQTTETINIQRHINEAPV
FSSNGTFTIDENTTAVGDVSAEDLKTNSALNFDGTDDYVDIDANVHRGNQNVITIEAWIK
TAGSTGIIPNIVSSSTLNNGDGTADNFQFRIRENKLEVGMDTGGWEGVTGATLVNDDEWH
HVAIVKSGSAVTLYVDGVEDGSGTINQTATPTHFYIGAYYENNQINADSYFKGQINDVRI
WNTARNAAELNDNRNTELVGDEAGLVGYYKFDETGGTAVADSSTSGNNGTLNNTTNDTTV
QNGDRMEYSIVSGDDGGSFTIDVSTGALSLNAPADYETKDNYSLTVRATDRASGLSTDQS
VTVNVTDQEGATITAVTSSTADGSYKAGDEISIQVTFSETVTVDTNGGTPQLTLETGATD
HAATYASGSGTNTLTFTYTVLAGDTSSDLDYAGTTALVSNGGTITANNESAILTLPAPGA
ANSLGANKALVIDTTAPTLSSSTPADDATEVAVGADLVLTFSEAVSAVTGKNLVIHKASG
DSVVATLAADDTTQITIAGGVVTVNPSADLAPDTDYYVLIDSGAFADAANNPYAGLADTT
ALNFTTAAAADTTAPSFQSAATSNDGTKVILTYGEALDASNAPEASASTVTVAGSPATID
SVAVNGSTVELTLQTAITHGQSVTVAYSDPTGGDDTHAIQDSAGNDAADLSATAVTNTVA
DSNDAPEITSNGGGETAAVNVAENSTAVTTVTATDADGDTLTYSLSGGADEDLFQINANS
GALRFTNAPNFESPQDQGDTAGNNTYVVEVQADDGNGGTDTQTITVTVTDVNENTGGGGG
GTPAPQPAPVPAPEPQPEPEPQPEPEPEPEPEPEPEPEPEPEPEPAPTLPPKEAWSDLPN
GDGDEIPDQIEAFAPPLEEGGKLGDGNGDGIPDNAQDDVASVPILDTDEVSKNPGAPMIF
ATLVGGGAAYDGEGDGGSEPSPPAGGVVIQAVTQKDAPPVDDQAGITMPLGLIGFEATAE
IPQGEQTAGEVSFSLLIEKDPDIPDDEQINGFWKKDSAGAWVNLASAEYGGQVTQVGNKI
RLDFIIEDNGPFDTNLTPGAITDPGAPGYLALKAPSPVTEPPILQPPVVEPPVAEPPSPG
FPTPAFPEPAPELIRPFDLTGASHFFDWMLLG
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcaacccaccaaatcgccgttatcgaccgcagcgtcagcgactatcaagcc
ctggcaaccgtcgccgagcaggccgggctggaggtgattctgctctctggtcagggagat
ggcgtcgccgaactcgccgccgcgctgcaagggagcagtggtattgaagcgctgcatctt
atctcccacggcagcgccgggcagatccagcttggcagtgctcatctgaataacgaatcc
ctgagcgaatattccgcaaccctcgcgcaaattggccagagcttgaccgctgagggcgat
ctgctgctttacggctgcaatgtgaccgaagatgacagcggtcgcgcctttatcgacgag
ttggcgcagatcaccggggcggatgtggcggcatcggatgatgtgaccgggtcagcggcg
atgggtggcgactgggtgctggaagcggcgattggcgatattgaatcgccggtgctcgct
acggcgggatttaacggcccattgggtgaccctaacgcttcccccaccatcgccattaat
caggcgctgaactttaatggggcggatgacaagatcgatttgggtgcgcccttgttgcca
acaagcggcagttcacacgccatgactctcatggcctggatgaaacctgataatgttagt
aaggatgaacaatggttcatcagtcaatatgatggtgtttctgacaaaaggtttatatgg
ggaatctttgataataaactctgttattttacgccaggtaatacaatcctttctaataca
actcttactagcggggaatggtgccatgttgctgttgttaaagaatcagacggtaccatc
acccactatctgaatggtgttgccgatggaggcggcacaaatacatcggctttcgtcgat
gtgcatacctatatcggtggcagcggatatcctcatccctctattagtgcctttggcaac
tttgacggggctctcgacgaagtcagtatctggaacacagctctcgatgccacggcaatc
caggccaccatgaacacctctctggccggcgatgaaaccggcttggtcgcctactacagc
tttgatcaggattttggcactgcgctcagcgatgacagcgacagcaatcctgcctacaac
ggcaccctgatagattttggtacgcccgtaaccgcgaccggtccactccagcaagttgtc
acggaagacgaggccggtaacctgcagttctcgggaactcctttcgccgatgcggatggc
aatactctgacggtgaccctgagcgtgggcgaagggagtattgcagcctcctctgctggt
ggtgtcacggtcgatgacaccaactccgcagcggtcacctttacaggcagtgtggataat
ctcaacaccttttttaccactgccggcaatatcacctacacctctgctgcagagcccagc
gccaacagtcaaaccctgaccatcagcgcgtccgacggcaacggcggcagtgattccgcc
acgcaagacatcatcattcggcacaatatcaacgaagcgccggtgttctcctctgaggcc
acatttaccgtcgatgaaaataccgcggaagtcggcacggtattggcggcggataacaag
accaatagcgcactgaatctcgccgcaacgaacgattttgcggcggtttcagggattgat
tttagctccgattcggtgaccatcgaggggtggttctcgtttaatgatctgacaggtcag
caaaatttgctccgtttaggaagtgatagcaatacctatctcaggattgttccggaaaaa
ttagaagacaacaaaattgcgttttttatcagtgatggtgcgaataataataatgatggt
gcagtggttttggttagcggtgtcagcgttgttgccaacgaattctatcatcttgcattc
gtctacgataataacggtgactcagcaacagcttccatccacgttaatggccaacaggta
gcgacgcaagggttaactgagaagattgctttcagtgcagattcttaccaaatgattctg
gcaactgaaaacaatgaccaattcaacgccaacgtgaaaatcaatgattttcgtatttgg
aatgccgccagaaccgaagcagaaattcaaaacaacatgaacaccgagctggtcggcaat
gaagctggcctggtcgcctactacaaaatggatgagaccagcggcgcgacgcttgcggac
agtgccaatgattacaatttagcggttacctctggaactgagaccgatcttgatgcgact
caaagcggcgacatcatggagtacagcatcgtcgaaacaggtgcagattgggataagttc
actatcgatagtagcagcggtgatctgagtctcaaaacccccgctgacgttgaaacccaa
gacacctacagtttaaccgtccgcgccaccgacagcgcatcagggctttctaccgaccaa
agcgttacggtgaatgtgactgatgtggaggaagcaccggtaatcagcggcaccccgacc
gatgtcgaagcggaagaggatgccatcaccaacctgttgttcagcggcaccccctttgcc
gatggagataacgatccgctgaccgtgaccctgtcggtgaccgaaggaactattgatgca
ccaggagatgccgatggtgatggcataacggtcggtggcaccgcaacagacagaaccttt
gccgggtctgtcgccgacctgaacactttctttaccaccgagggcaagattacctacacc
tcggccgagaatccgacaacggacagccaaaccctgaccatcagcgccaacgacggcaac
accaccacccagacgactgaaaccatcaacatccagcgccatattaacgaagcaccggta
ttcagctccaacggcaccttcactatagatgaaaataccaccgccgtcggcgatgtctcg
gccgaagatctaaagaccaacagcgcgctcaattttgacggtacggatgattatgtcgat
atcgacgctaatgtgcaccgcggcaaccaaaatgtcatcaccatcgaggcatggatcaaa
accgcgggcagcacggggatcattccaaacatcgtcagctcatctacgcttaacaatggc
gacggcacagcagataatttccaattcagaatacgtgaaaataaacttgaagtcggtatg
gacaccggggggtgggagggtgttaccggtgccaccttagtgaatgacgacgagtggcat
cacgtcgccatcgtaaaaagtggctctgctgtgaccctgtatgttgatggggtggaagac
ggtagcggaacaatcaatcagaccgcaacgccgacccatttctacattggcgcttactac
gaaaacaaccagatcaatgctgacagctacttcaaaggccagataaacgatgtccgtatc
tggaataccgctagaaatgcggctgaactcaacgacaacaggaacaccgaactggttggt
gatgaagccggcctggtggggtactacaaatttgatgaaaccggcggcacggctgttgcc
gacagttctacttccggcaataatggcaccctcaacaatacgaccaatgacacaaccgtt
cagaacggcgataggatggagtacagcatcgttagtggtgacgatggcggtagcttcacc
attgatgtcagtaccggggcgctgagcctgaacgcccccgcagattatgagaccaaagac
aactacagtttaaccgtccgcgccaccgaccgcgcatcagggctttctaccgaccaaagc
gttacggtgaatgtcacggaccaggaaggagcgaccatcaccgccgtcacgtcatcgact
gccgatggcagctacaaagccggcgatgagatcagcattcaggtgaccttcagcgaaacg
gtcacggtcgataccaacggcggcaccccgcaactcacgctggaaaccggcgccaccgat
cacgcggccacctacgccagcggctccggcaccaacaccctgaccttcacctacaccgtg
ctggcgggcgataccagcagcgatctcgactacgccggcaccaccgccctggtgtcgaac
ggcggcaccattaccgccaacaacgaatccgccatactgaccctgcccgcgcccggcgcg
gccaactcgctgggggccaacaaggcgctggtgatcgataccaccgcaccgaccctcagc
agcagcaccccggcggatgacgccaccgaggtggcggtcggtgccgacctggtgctgacc
ttcagcgaggccgtgagcgccgtcaccggcaagaacctggtcattcacaaggccagcggc
gacagcgtggtcgccaccctcgcggcggacgacaccacgcagatcacgattgccggtggc
gtggttacggtcaacccgagcgccgacctcgctcccgacaccgactactacgtgctgatc
gacagcggtgcctttgcggacgcggcgaacaacccctacgcaggcctcgccgacacgacc
gcgctcaacttcaccaccgctgcggcggcggacaccacagccccgagcttccagtcggcg
gccaccagcaacgacggcaccaaagtcattctcacctacggcgaggcactcgatgccagc
aatgcgcccgaggccagcgcctccaccgtcacggttgccggtagtccggccaccatcgac
agcgttgcagtcaacggcagcaccgtcgagttgaccctgcaaaccgccatcacccacggg
caatcggtcacggtcgcttacagcgatcccacgggcggagacgacacccacgccattcaa
gatagtgctggcaacgatgccgccgatctgtcggccactgcggtcaccaatactgttgca
gacagcaacgatgctcccgaaattacctctaacggcggcggcgaaacagcggcggtcaat
gtcgccgaaaacagcaccgccgtgaccacggtgaccgccaccgatgccgacggcgatacc
ctaacctacagcctcagtggcggggcggatgaggatctgttccagatcaacgccaacagc
ggcgcgctccgcttcaccaacgcgccgaacttcgagagtccgcaagaccagggcgacacc
gccggcaacaacacctacgtggtcgaggtccaggccgacgacggcaacggcggcaccgac
acccagaccatcactgtgaccgttaccgatgttaatgagaacaccggcggtggcggtggc
gggacacccgcgccgcagccagcacctgtgcccgcaccagaaccgcaacctgagccggaa
ccgcaacctgagccggaacccgagccagagccagaacccgagccggaacccgagccggaa
cccgagccggaacccgcccccacgcttccgccaaaggaggcttggagcgacctgcccaac
ggcgatggagatgagattcccgaccagatcgaggcatttgcgccgcccctggaagaagga
ggcaagctgggcgacgggaatggcgatggtatccctgacaatgcacaagacgatgtggct
tcggtacccattctcgacaccgacgaggtctccaagaaccccggcgcaccgatgatcttt
gccaccttggtcggtggcggcgcggcttacgacggtgagggcgacggtggcagcgagcca
tcgccacccgccggaggcgtcgtgattcaggcagtcacccagaaagacgccccgcctgtc
gacgatcaagccggcattaccatgccactgggcttgatcggctttgaagccacggctgaa
atcccccagggcgagcagactgccggcgaagtatcctttagcctgctgattgaaaaagac
cccgacattccggatgacgagcagatcaacggattctggaaaaaggacagcgccggcgcc
tgggtcaatctcgccagtgccgagtatggcgggcaagtcacgcaggttggcaacaaaatt
cgcctcgacttcatcatcgaggacaatggccccttcgataccaatcttacccccggcgcc
atcaccgaccccggcgcacccggttatcttgcgctcaaagccccgtccccagttacagaa
ccgccaattctccagccgccggtcgtggaacccccggtcgcggaacccccgtccccaggc
tttcccactccagcattcccggaaccagcgccagaactgatccgcccgtttgacctgacc
ggcgcctcccacttcttcgattggatgttactgggataa
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