Thiorhodovibrio frisius: Thiofri_01004
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Entry
Thiofri_01004 CDS
T09561
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tfri
Thiorhodovibrio frisius
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfri03016
]
Thiofri_01004 (truB)
Enzymes [BR:
tfri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Thiofri_01004 (truB)
Transfer RNA biogenesis [BR:
tfri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Thiofri_01004 (truB)
Prokaryotic type
Thiofri_01004 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WPL20898
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All DBs
Position
974135..975097
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AA seq
320 aa
AA seq
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MARRRKQGRKVAGILLLDKPLGDTSNHALQRVKHLFYAAKAGHTGSLDPLATGLLPICLG
HTTKFSSFLLDADKRYRVRVRLGETTTTADAEGEILERRPTDGVTEAGVLACIERFVGDI
EQLPPMYSAVKHQGQRLYKLAREGREVERQPRAIRIHRLELTSFALPDLELDVHCSKGTY
VRTLAEDIGNCLGCGGHVIGLRRTGVGPYIEGDTRFVTMDELQALADAARDADAEDGSAP
PLHERLQTLDALLLSLDTALGHCPALRLSADAAFYLGQGQPVLVPQAPTEGMVRLYDQSE
RFLGVGSILDDGRVQPKRLV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacgacgtaaacaaggccgcaaggtcgcgggcattctgctgctcgataagccc
ctaggggacacatcaaatcacgcgctccagcgagtcaagcatttgttctatgcggccaag
gcagggcacacgggtagcctcgacccgctcgccactgggttgttgccgatctgcctcggc
cataccaccaagttttcaagctttctgcttgatgccgataagcgctaccgggtgcgggtg
cgcctgggcgaaaccacgaccacggcagatgccgagggcgagattctcgaacgcagaccg
actgatggggtgaccgaagctggcgtgctggcctgtatcgagcgctttgttggcgacatc
gagcagctcccgcccatgtattcagctgtgaagcaccagggccagcggctctacaagctc
gcgcgcgagggacgggaagttgagcgccagccgcgcgcgattcgcattcaccgccttgag
ttgacgagctttgctttgccggatctggaactcgatgtgcattgttctaagggcacctat
gtgcgcaccttggccgaggatatcggcaactgcttaggctgtggcggtcatgtcattggt
ctgcggcgcaccggcgtcggcccttatattgagggcgacacccgctttgtcaccatggat
gagctgcaagctctggccgatgcggcccgggacgcggatgccgaggatggcagcgcgccg
cccttgcacgagcggctgcaaacccttgatgccttgttgctctcgctcgataccgcgctg
ggccactgtccggcgctgcgcctgtccgctgatgcagccttttacctggggcaggggcag
ccggtgctggtgccgcaggcaccgaccgagggcatggtgcgactctatgaccagtcagag
cgctttcttggggtgggcagcattctcgacgacggccgggtgcagccaaagcgactggtc
tga
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