Thiorhodovibrio frisius: Thiofri_01053
Help
Entry
Thiofri_01053 CDS
T09561
Symbol
dapE
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri00300
Lysine biosynthesis
tfri01100
Metabolic pathways
tfri01120
Microbial metabolism in diverse environments
tfri01230
Biosynthesis of amino acids
Module
tfri_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Thiofri_01053 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfri01002
]
Thiofri_01053 (dapE)
Enzymes [BR:
tfri01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Thiofri_01053 (dapE)
Peptidases and inhibitors [BR:
tfri01002
]
Metallo peptidases
Family M20
Thiofri_01053 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Vac_Fusion
Pvc16_N
Motif
Other DBs
NCBI-ProteinID:
WPL20946
LinkDB
All DBs
Position
complement(1023230..1024381)
Genome browser
AA seq
383 aa
AA seq
DB search
MSPVLELAQALIARPSLTPDDADCQSLLGERLSRLGFHLETLRFGEVTNLWARFGDQTPL
VCLAGHTDVVPTGPLDQWHSDPFAPAVRDGLLYGRGAADMKSSLAAMVVACEQFLAKCPK
PAGSIALLITSDEEGSAVDGTCRVMETLQARSEHIDYCLVGEPSSQDKLGDQVRNGRRGS
LNARVRLSGRQGHVAYPELARNPIHRLGEVLGPLCAEVWDRGNAYFPPTSFQISNIHAGT
GAENVIPGDLELLCNWRFSTELTPEQIQQRFTDLLEKTGLENQIDWRLSGEPFLTPAGAL
TEATAAAIKEVTGIDTRLSTSGGTSDGRFIAPSGAQVVELGPLNATIHKINECVPVADLE
PLAAIYAGILVRLLAQPSPSVAA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctgtattggaactggcccaggcactcatcgcccggccatcactgacgccagat
gacgctgactgtcagtcgctcttgggcgagcggctgtcacgtcttggctttcacctcgag
acgctccggtttggcgaagtcaccaatctctgggcgcgttttggcgaccagacgccgctg
gtatgcctggccgggcatacggatgtggtaccgaccggcccgctcgatcaatggcacagc
gaccctttcgcacccgcagtgcgtgacggtctgctctatggtcgcggcgcggcggatatg
aaaagctccctggcggccatggtggtggcctgcgagcagttcttggcgaaatgtccgaaa
cccgcaggctccatcgccttgctgatcaccagtgacgaggaaggatccgctgttgatggc
acctgccgggtgatggagacattacaagcccgcagcgagcacattgactactgcctggtt
ggcgagccttcaagccaggataagctcggagatcaagtccgcaatgggcgtcgcggtagc
ctgaatgcacgggtgaggctgagcggccgtcagggccatgtggcttacccggagttagcg
cgaaaccccatccatcgcctgggcgaggtgcttggcccactgtgcgcggaggtctgggac
aggggcaatgcctacttcccgccaaccagctttcagatttccaacatccacgctggtacg
ggtgccgagaatgtcattccgggcgacctggaactcttgtgcaactggcgcttttcaacc
gaattaacgccggagcagattcaacagcgctttaccgacttactggagaaaaccggcctt
gaaaaccagattgactggcgcttgtcgggcgagcctttcctgaccccggctggcgcgctg
acggaggcgacagccgctgcaatcaaagaggtgacaggcatcgacacccgactctcaacc
agcggcggcacctcggatgggcgcttcatcgcgccgagtggtgctcaggtggtggaactt
ggcccgctgaacgcgaccattcacaagatcaacgaatgcgtgcctgtggctgatctggag
ccgctcgcggccatttatgccggcattctcgtgcgactgctggcccagccgtcaccttca
gtcgctgcctag
DBGET
integrated database retrieval system
