Thiorhodovibrio frisius: Thiofri_01090
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Entry
Thiofri_01090 CDS
T09561
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Thiofri_01090 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfri03400
]
Thiofri_01090 (mutS)
DNA repair and recombination proteins [BR:
tfri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Thiofri_01090 (mutS)
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
CcmD
Motif
Other DBs
NCBI-ProteinID:
WPL20983
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Position
complement(1074428..1077151)
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AA seq
907 aa
AA seq
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MMQQYLRIKAEHPDMLLFYRMGDFYELFFEDAERAARLLDITLTKRGQSAGKPIPMAGIP
YHAAESYLARLVRQGVSVAICEQTGDPAKSKGPVDREVVRIVTPGTLTDEALLDQRRENL
LCAVAEQSLPAPTEGESDSRALAFGLASLELASGRFTLLELSGLEALSAELERLQPAELL
LDEDSLLDKRLALGSGLARRPAWHFDADSAERMLCEQFGTRDLSGFGCGGVDTGSGAATD
SRSNTGLRLAVGAAGCLLQYVKDTQRAALPHLRGLTVEQRDQAVILDAATRRNLELTQTL
SGQEGHTLAAIMDNTRTAMGARLLRRWLNRPLRDVHDVRLRHDAIATLIETARGEPLRET
LSAIGDLERILARVALGSARPRDLATLRDALGLLPELHQSLAALDSPLLTSLDQDLGDHP
EVRDLLQRALIEQPPMLIRDGSVLAPGYDAELDELRNLAEHGDQFLLELEARERERTGIP
ALKVSYNRVHGYYIEIGRTHSDKVPDDYQRRQTLKGVERYITPELKRFEDQALSARERAL
AREKMLYDELLAQLIAHLAALQTTAAAIASLDVLANLAERAERLGWTRPELSGEIGIEIE
DGRHPVVEQLSDAPFVANSVRLDPERRMLIITGPNMGGKSTFMRQTALIVLMAHAGSFVP
ARSAQIGPIDRIFSRIGAADDLAGGRSTFMVEMEETANILHNASANSLVLMDEIGRGTST
FDGLSLAWACAVELDTRLRALTLFATHYFELTSLPEEHPGIANLHLEAIEHGEKIVFMHS
VREGPANQSYGLQVAALAGVPAEVIARARERLRQLEDQSQRQAASQNLPPKREGDGERDQ
GPDQKRDQGRDPIRDQDRTHMAQLSLFPAELPSPALERLRAINPDDLSPRQAIDLLYELR
QLDHKNR
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacagtacctccggatcaaggccgagcatccggacatgctgctgttttatcgt
atgggggatttctacgagttgtttttcgaggatgcggagcgcgcggcgcggttgctcgac
atcaccctgaccaagcgcggacagtcggcggggaagccgattccaatggcaggcatccct
tatcacgcggccgagagctatctggcgcgcctagtgcgtcagggtgtgtcggttgccatt
tgcgagcagacgggcgatccggccaagagtaagggtccggttgatcgcgaggtggtgcgc
attgtcacgccggggacgcttaccgacgaggcattacttgatcagcgccgagagaatctg
ctgtgcgccgtcgccgagcaatccctgccggcacccaccgagggtgagtcggacagccgc
gctcttgcctttgggctcgccagcctggagctggccagcggacgcttcacgctgctggaa
ctgagcggtcttgaagcgctgagcgccgagctcgagcggctgcaaccggcggaactgctg
ctggatgaggacagcttgctcgacaaacgcttggcgctcggcagcggcttggcccgacgc
ccggcctggcatttcgatgcggacagcgccgagcgcatgctatgcgagcagttcggcacc
cgggatctctcgggctttggctgcggcggggtcgatactggctccggcgcagcgaccgac
tccagatcgaatactgggctgcgcctggccgtcggcgccgctggctgtctgctgcagtat
gtaaaagacacccagcgcgctgccctgccccatctgcgcgggctgacggtggagcagcgc
gatcaggcggtgattctggatgcggcgacccggcgcaatctggagctgacccagacgctg
tccggtcaggaggggcacaccctggccgcgatcatggacaacacccgcaccgccatgggg
gcgcgcctgctgcgccgctggctgaatcgcccactgcgcgatgtgcacgatgtacgccta
cgacacgacgccatcgccacgctcatcgagaccgcccgcggtgagccgctgcgcgaaact
ctgtcggccatcggcgacctggagcgcattctcgcgcgggtggcactaggctccgcccgc
ccacgcgacctcgccacgctgcgcgatgccctcggcctgctgcctgagctgcaccagtca
ctggcggcgctcgacagcccgctgctgacaagcctggatcaagacctaggggaccatccc
gaggtccgcgacctgctccagcgtgcgctgatcgagcagccgccgatgctgatccgcgac
ggtagcgtgctagcacccggctacgatgctgagctggatgaactgcgcaacctggccgag
catggcgatcagttcttgctggagttggaggcgcgcgagcgtgagcgcaccggcatcccg
gcactcaaggtcagctacaaccgggtgcatggttattacattgagatcggtcgcacccat
tccgacaaggtcccggacgactaccagcgccgccagacgctcaaaggcgtcgagcgttac
atcaccccagagcttaagcgcttcgaggaccaggcgctgagcgcccgcgagcgtgccctg
gcgcgcgagaaaatgctctacgacgagctgctcgcccagctgatcgcgcatctggcggcg
ctgcaaaccacggccgccgccatcgccagcctggatgtgctggccaatctggccgagcgc
gccgagcggcttggctggacgcgcccggaattgagcggcgagattggcattgagatcgag
gacggccgccatccggtggtggagcagctgagcgacgcgccctttgtcgccaacagcgtg
cggctcgaccccgagcgacgcatgctgatcatcaccggccccaacatgggcggtaagtcc
accttcatgcgccaaaccgcgctcatcgtgctgatggcccatgccggcagcttcgtgccg
gcgcgcagcgcacaaatcggccccattgatcgcatcttttcgcgcatcggagccgccgat
gatctcgccggcggtcgttcgacctttatggtggagatggaggagacggccaacattctg
cacaacgccagcgcgaacagcctggtgctgatggacgagattggccgcggcaccagcacc
ttcgacgggctatcgctggcctgggcctgcgcggtggagctggacacccgattgcgcgcg
ctgacgctgttcgcgacacattactttgagctcaccagcctgcccgaggagcaccccggc
atcgccaacctgcatctcgaggccattgagcatggcgagaagatcgtctttatgcacagc
gtgcgcgagggaccggccaaccagagctacggcttgcaggtggccgcgctggccggagtg
ccggcggaggtgattgcccgcgcccgcgagcggctgcgccagctcgaggatcagagccag
cgtcaggcggccagccagaacctgcctccgaagagagaaggcgatggggagcgggaccag
gggcctgatcagaagcgggatcagggccgcgatcccataagggatcaggacaggactcac
atggcccagctgtcgctattccccgccgaactgccgagcccagcgctcgagcgcctgcgc
gccatcaatccggatgatctaagcccgcgccaagcgattgacctgctctatgagctcagg
cagctcgatcacaaaaatcgctaa
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