Thiorhodovibrio frisius: Thiofri_01192
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Entry
Thiofri_01192 CDS
T09561
Symbol
lcfB
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri00061
Fatty acid biosynthesis
tfri00071
Fatty acid degradation
tfri01100
Metabolic pathways
tfri01212
Fatty acid metabolism
tfri02024
Quorum sensing
tfri04146
Peroxisome
Module
tfri_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Thiofri_01192 (lcfB)
00071 Fatty acid degradation
Thiofri_01192 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Thiofri_01192 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Thiofri_01192 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tfri01004
]
Thiofri_01192 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfri04147
]
Thiofri_01192 (lcfB)
Enzymes [BR:
tfri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Thiofri_01192 (lcfB)
Lipid biosynthesis proteins [BR:
tfri01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Thiofri_01192 (lcfB)
Exosome [BR:
tfri04147
]
Exosomal proteins
Exosomal proteins of breast milk
Thiofri_01192 (lcfB)
Exosomal proteins of breast cancer cells
Thiofri_01192 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WPL21084
LinkDB
All DBs
Position
complement(1182898..1184466)
Genome browser
AA seq
522 aa
AA seq
DB search
MTALQSLPQGFRLTASRYAATPAILTDEKTWTYADLDIASDGIAAGLAAHGIVPGERVGL
YCPNDADFVCCYLGILKAGACAVPINLLLPPTAIAFALKDAGVKALCFHAAFAEQSTAAL
AELPGVALRIGIGAVPSDLIDCRLDDLASKSEPPALSIDPEQAPAVILYTSGTTGRPKGA
VLTHANLAANARAVAEVLEVRPGDSGGQSGDRFLVVLPMFHAFAATVGILTPLLAGAALI
PVPRFDPALITEAIGNHRATIFLGVPSLYAVLLRLDDSQTARWRSVRLCISGGAAMPEAV
MQAFEARFSVPILEGDGPTECGPVTCVNPPAGPRKPRSVGPPLPGVEMRIADPDGNWQAQ
GEHGEVCVRGPSVMRGYWKLPEETRASFHGDWFRTGDLGWRDSDGWFFLVDRIKDLIITN
GMNVYPRIIEEVLIRHPGVAEAAVVGEPHPLHGEIPVAYVTAAPEQTKLDLSALKDWCRS
QLGRHELPRRFEQLDALPKNAAGKILKRELRRSGEHERGVMT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgcttcaatccctaccccaaggcttccgcctgacagccagccgctacgctgcg
accccggctattctcaccgacgagaaaacctggacctacgcggacctcgacatcgccagc
gacggcatcgccgccggcctggccgcgcacggcattgtgcctggtgagcgtgtcgggctc
tattgcccaaacgatgccgacttcgtctgctgttatctcggcattctcaaggccggcgcc
tgtgcagtgcccatcaacctgctgctgccaccaaccgccattgccttcgcgctcaaggac
gccggtgtcaaagcactctgttttcatgccgcctttgccgagcaatccaccgcagccttg
gccgagttgccgggcgtggcgttgcgcattggcatcggcgcggtaccctccgacttgatt
gattgccgactggatgatctggccagcaaatcagagccgccggcgctgagcattgatccc
gaacaggctccagccgtgatcctttacacctctggcaccactggccggcccaagggcgcc
gtgctgacccacgccaacctggccgccaatgccagggcggtggccgaggtgctcgaagtc
cgccccggggatagcggcggccagagcggcgaccgcttcctggtcgttttgcccatgttc
catgccttcgccgccaccgtcggcatcctcacacccttgctcgccggggcggcactcatt
ccggtgccgcgcttcgatccagctctgatcaccgaagccatcggcaaccatcgcgcaacc
atcttccttggcgtgcccagcctttacgctgtgctgctgcgcctcgacgacagccagacc
gcgcgctggaggtcggtgcgactgtgcatctccggcggcgctgccatgcccgaggcggtc
atgcaggcattcgaggcgcgcttttcggtgcccatcctcgaaggtgacggtcccaccgaa
tgcggcccggtcacctgcgtcaacccaccggctggaccgcgcaagccgcgctccgtcggg
ccacccctgccgggagtggagatgcgtatcgccgaccctgacgggaactggcaagcgcag
ggcgagcatggggaggtctgcgtgcgcggcccgagcgtgatgcgcggctattggaagcta
cccgaggagactagagccagcttccacggcgactggttccgcactggcgatcttggctgg
cgcgacagtgacggctggtttttcctggtcgaccgcatcaaggatctgatcattaccaat
gggatgaacgtctatccgcgcatcatcgaagaagttctgatccgccaccccggagtggcc
gaagccgccgtcgtcggcgaaccacaccccttgcacggtgagatcccggtcgcttatgtc
acggccgcaccggagcaaaccaagctcgacctcagcgcgctcaaggactggtgtcgctcc
caactcggtcgccatgaactccctcgacgcttcgagcaacttgacgccttgccaaaaaac
gccgccggcaaaatcctcaaacgcgaactacgccgcagcggcgagcacgagcggggagtg
atgacctga
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