Thiorhodovibrio frisius: Thiofri_01476
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Entry
Thiofri_01476 CDS
T09561
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri00541
Biosynthesis of various nucleotide sugars
tfri01100
Metabolic pathways
tfri01250
Biosynthesis of nucleotide sugars
Module
tfri_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Thiofri_01476 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tfri01005
]
Thiofri_01476 (kdsB)
Enzymes [BR:
tfri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
Thiofri_01476 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
tfri01005
]
Lipid A
Thiofri_01476 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
WPL21351
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Position
complement(1528575..1529363)
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AA seq
262 aa
AA seq
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MTDVTKPQSPFKVVIPARHGASRLPGKPLVDIGGKPLIAHVWERARKSLAAEILVATDDA
RIEHVCRGFGAETLMTSTHHPSGSDRIGEAMRLRAWEADTIIVNLQGDEPCVPAALINQV
AATLEQHPELGMATLSAPINAAQALSDPHIVKVVTDAEGRALYFSRAPIPWHRDAFLGDR
AQLPSGLTLQRHIGLYAYRVGFLARFLAWPPAPLEQVEALEQLRVLWHGERIQVEEACAP
LGPGVDTREDIPAVLEWLGLAA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtcaccaagccccaatcgcccttcaaggtggtcattcccgctcgccatggc
gcctcgcgcctgcccggcaagccgctggtggatattggcggcaagccgctcattgcccat
gtctgggagcgtgcccgcaaaagcctggccgcagagatactggtcgcaaccgacgatgca
cgcatcgaacacgtctgccggggatttggcgcagagaccctgatgacctccacgcaccac
ccgagcggctctgatcgaatcggcgaggcaatgcggctgcgcgcttgggaagccgacacc
atcatcgtgaacctgcaaggggacgaaccctgcgtcccagccgccctgatcaatcaggtc
gccgccacgctcgaacagcatccagaactcggtatggcaaccctgtccgcgcccatcaac
gcggcccaggcactgagcgatccgcacatcgtgaaagtggtgactgacgccgaaggcaga
gcgctctacttctcgcgcgctcccattccctggcatcgcgacgcctttcttggtgatcgc
gcacagctcccctctggcttgacacttcagcgccacatcgggctgtacgcctatcgggtc
ggctttctcgcccgttttcttgcctggccgcccgcgcctctggaacaggtcgaggcgctc
gagcaattgcgcgtgctctggcatggcgagcgtattcaggtcgaagaggcatgcgcgccc
ctaggcccgggtgtcgatacccgcgaagacattcccgcggtactcgaatggcttggactc
gcggcctaa
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