Thiorhodovibrio frisius: Thiofri_01580
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Entry
Thiofri_01580 CDS
T09561
Symbol
ypdB_2
Name
(GenBank) Transcriptional regulatory protein YpdB
KO
K08083
two-component system, LytTR family, response regulator AlgR
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Thiofri_01580 (ypdB_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tfri02022
]
Thiofri_01580 (ypdB_2)
Two-component system [BR:
tfri02022
]
LytTR family
AlgZ-AlgR (alginate production)
Thiofri_01580 (ypdB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
LytTR
Motif
Other DBs
NCBI-ProteinID:
WPL21455
LinkDB
All DBs
Position
complement(1643301..1644035)
Genome browser
AA seq
244 aa
AA seq
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MKILLVDDEAHARERLRRLIAEFNGDYQIVAEADNGADAVRRCSEASADLVLLDIRMPGM
DGLSVAEHLAQLSPPPAVILITAYPEYALEAFEHQVANYLVKPVRAERLREALERLHVVT
RPQQQMADEDAPAWPRRHLSAQYRGGVQRVAIEDILFLQAEQKYVTVYHGGGKMLLDESL
KTLEEEFPERFLRIHRSILVCARRLIGLEKSPQGGILAVLDGSDQRLPVSRRHLPSVRRF
LRAS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacttctcgtcgatgatgaagcacatgcacgcgagcgcctgcggcgcctgatt
gctgagttcaacggcgactaccagatcgtcgccgaagcggacaatggcgccgatgctgtg
cgtcgttgcagcgaggccagcgccgacctggtgctgctcgacattcgcatgcccggaatg
gatggcttgagcgttgccgagcatctggcgcagctcagtccaccacccgcagtgattctg
atcaccgcctatccggaatacgcgcttgaggcgtttgagcatcaggtcgccaattatctg
gtcaagccagtgcgtgccgagcggctgcgcgaagcactcgagcggctgcatgtggtcacc
agaccacagcaacaaatggcggacgaggatgcgccggcctggccacgccgccacctgagc
gcccaatatcgcggcggtgtgcaaagagtcgcaatcgaggacatcctttttctacaggcc
gagcagaaatacgtcaccgtttatcatggcggcggcaaaatgctgctcgatgaatcccta
aagaccctggaggaggaattccccgagcgcttcctgcgcattcaccgcagcattctggtg
tgtgctcggcgcttgatcgggcttgagaaaagccctcaaggcggcattctcgctgtcctg
gatggaagcgaccagcgcctgcccgtcagccgccgtcatcttccgagtgtgcgccgcttt
ctgcgcgcaagctga
DBGET
integrated database retrieval system
