Thiorhodovibrio frisius: Thiofri_01963
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Entry
Thiofri_01963 CDS
T09561
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tfri
Thiorhodovibrio frisius
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfri03400
]
Thiofri_01963 (phrB)
Enzymes [BR:
tfri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Thiofri_01963 (phrB)
DNA repair and recombination proteins [BR:
tfri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Thiofri_01963 (phrB)
Prokaryotic type
Thiofri_01963 (phrB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WPL21829
LinkDB
All DBs
Position
complement(2047548..2049029)
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AA seq
493 aa
AA seq
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MPSTAILWFRRDLRLSDNPALMAALDGCERLLPVYLHAPDEEAPWSPGAASNWWLHHSLQ
ALDACLRERGSRLFILRGDSLACLQALITATSARAVFWNRCYEPARIARDSFIKQQLRAQ
GIRCESHNGGLLFEPWEIKTGADQPFKVFSAFWRRATARLAEIPAPSPTPEVLPPLPEAI
ASGRTQLSKSLAEQPLERLDLLPRISWDAAFPTTWQPGAAGAQARLRRFLDQAAHDYAET
REQPGVEGSSKLSPHLHFGEIGPREVLKATNATVGDHEAFVRELGWREFSVHLLFHFPQT
AEVPLNPLFADFPWRDPTPPELLRAWQQGQTGIPLIDAGMRELWHSGWMHNRVRMIVASF
LTKNLRIPWQTGARWFWDTLVDANLANNTQGWQWTAGCGADAAPYFRIFNPVRQGERFDP
EGVYVRHWCPELTRLPKRYLHAPWTAPVAILQQSGVELGITYPRPIIDLADTRREALAFW
QQLRDTDSRANFA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaaccgccattttgtggttccgtcgcgacctgcggctgtcagacaatccagcc
ctgatggccgcactggatggatgcgaacgcctgctgccagtttatcttcatgcgccagac
gaggaagccccctggtcacccggagctgcgtcaaactggtggctgcatcacagcttgcaa
gcccttgatgcttgcttgcgcgaacgcggctcgcgcttattcatcctgcgtggcgacagt
ctcgcctgtctgcaagcgctcatcaccgcgacttcggcccgcgcggtattctggaaccgc
tgctacgaaccggccagaattgcacgcgacagcttcatcaagcagcaactgcgcgcccaa
ggcatccgctgcgaaagccacaatggtggattgttgtttgagccctgggagatcaaaacc
ggcgctgatcagccattcaaggtgttcagcgcgttctggcgacgcgccacggcgcgtctg
gcggaaattccagcaccatcgccaacacccgaggtcttgccgccgctcccagaagccatc
gcatcgggcagaacacagttatcaaaatcgctcgcggaacaacccctggagaggcttgac
ctgctgccgcgcattagctgggatgccgctttccccaccacctggcaaccaggtgcggct
ggcgcccaggcgcggcttcggcgctttctcgaccaagccgcgcatgactatgccgaaacg
cgcgagcagccgggcgttgaaggcagctcgaagctctcgccgcatctgcattttggcgag
attggcccgcgcgaagtgctcaaggccaccaatgccacggtgggtgatcatgaggctttc
gtgcgtgagcttggctggcgagaatttagtgtgcatctgctgtttcattttccgcaaacg
gctgaggtgccgctaaatccgctgtttgcggacttcccctggcgcgatcccaccccgccc
gagctactccgcgcctggcagcaaggccagaccgggattccgctcattgatgccggcatg
cgcgagctttggcacagcggctggatgcacaaccgggtgcgcatgattgtcgcctccttt
ttgaccaagaacctgcgcattccctggcagaccggagcacgctggttctgggacaccctg
gtagatgccaacctggccaacaacacacaaggatggcagtggaccgccggctgcggtgcc
gacgcagcgccctactttcgcattttcaatccggtgcgccagggcgagcgtttcgatccc
gagggagtttatgtgcgtcactggtgcccggagcttacccgcctgcctaagcgctatctg
catgcgccctggacagcgcccgttgctattttacaacagtctggcgtggaacttggcatc
acttatccgcgtccaatcatcgacctggccgacaccagacgcgaagccttggcattttgg
caacagttgcgtgatactgacagtcgcgcgaatttcgcgtaa
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