Thiorhodovibrio frisius: Thiofri_02358 Help Entry Thiofri_02358     CDS       T09561                                  Symbol rpoD Name (GenBank) Sigma-70   KO K03086   RNA polymerase primary sigma factor Organism tfri  Thiorhodovibrio frisius Pathway tfri02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:tfri00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     Thiofri_02358 (rpoD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tfri03021]     Thiofri_02358 (rpoD) Transcription machinery [BR:tfri03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      Thiofri_02358 (rpoD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_ner Sigma70_r3 Sigma70_r1_1 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 K-box Motif Other DBs NCBI-ProteinID:  WPL22199 LinkDB All DBs Position 2458316..2460136 Genome browser AA seq 606 aa AA seqDB search MDQEQHQASQLKQLIAKGKDQGFLTYTEVNDHLPDGIVEPEQIEDIVRMINDMGITVHET APSEVDQLSDSAVADDEAAEAAAAALASVDSEFGRTTDPVRMYMREMGTVELLTREGELR IAKRIEEGLNQVLQALSLYPKTVGMLLELIEQAEREEIRITDVISGFDDGSDEIAQPINK GAAKEVNGDAESSEEEAEVIDTGPDPEEFAQRAKALRDSYERLILCLHDYGRDDDRTRYA GERVSEEFLGFKLVAGVFNDLIRVLRQTIERIRAQERHIMGLCIDGARMPRKVFIDSFPD NETNAGWLDQHLASSAKYAGRLGEYAEEVRRAQRRLMELEEENVLSISEIKEINRKMSIG EAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFS TYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMVQEMGREATPEELAERME MPEDKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSTVISPVDSATAEGLREATQNML ASLTSREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSDKLR SFIDSE NT seq 1821 nt NT seq  +upstreamnt  +downstreamnt atggaccaggaacagcaccaggcgtcgcagttgaaacagttgatcgcaaagggcaaggat cagggcttcctgacctacaccgaggtcaacgaccatctgccggacggcatcgtcgagccc gagcagatcgaagacatcgtgcgcatgattaacgacatgggcattacagtccatgagacg gcgccctctgaggtcgaccaactcagcgattccgctgtcgccgatgacgaggccgctgag gctgctgcggccgcactcgcctcagtcgacagcgaatttggccgcaccactgatccagta cgcatgtacatgcgtgaaatgggcacggtcgaactgctcacgcgcgagggcgagttgcgc atcgccaagcgcattgaggaaggtctcaaccaggttctgcaagcgctatcactgtacccg aaaaccgtcggaatgttgctcgaactcatcgaacaggccgagcgcgaagaaatccgcatc accgacgtgatttccggcttcgacgacggcagcgacgaaatcgcccaaccgatcaataag ggagcggccaaggaagtcaacggcgacgctgaaagcagcgaagaagaggccgaagtgatc gataccggccctgatccggaagaatttgcccagcgcgctaaagctctacgcgatagctat gagcgcctgatcctctgcctgcacgactacggtcgcgacgatgatcgcacccgttacgct ggcgagcgggtctcagaggaattccttggcttcaaactggttgccggtgttttcaacgac ctgatccgcgttctgcgccagaccatcgagcgcatccgcgcccaggagcgtcacatcatg gggctgtgcatcgatggggccaggatgccgcgcaaggtctttatcgattccttccccgat aacgagaccaatgccggctggctcgatcaacacctcgcctccagcgccaaatacgccgga cggcttggcgagtacgccgaggaagtccgtcgcgctcagcgtcgcctgatggagctcgaa gaagaaaacgtcctcagcatcagcgaaatcaaggaaatcaaccgcaagatgtccattggt gaggccaaggcccgtcgcgccaaaaaggaaatggtcgaggccaacctgcgtctggtgatt tccattgccaagaaatacaccaatcgcggcttgcagtttctggacctgattcaggaaggc aatatcggcttgatgaaagcggtggataagtttgaataccgccgtggctacaaattctcc acctatgccacttggtggattcgccaggccattactcgttccattgccgaccaggcgcgc accatccgcattccggtgcacatgatcgagacaatcaacaagctcaatcgcatctcccgg cagatggtgcaggaaatggggcgcgaagctaccccagaggagctggccgagcggatggaa atgcccgaggacaaagtgcgtaaggtgctcaagatcgccaaggaacccatctccatggaa accccaatcggcgacgatgaagactcccatctcggcgacttcattgaggactccaccgtc atctccccggtcgactccgccacggccgagggtctgcgcgaggccacccagaacatgctc gctagccttacctcgcgcgaggccaaggtcctgcgcatgcgtttcggcatcgacatgaac accgaccacacccttgaggaagttggcaagcaattcgacgtcacgcgcgaacgcattcgc cagatcgaagccaaagccctgcgcaagctacgccacccaacccgctcggacaaactgcgc agcttcattgactccgagtaa

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