Thiorhodovibrio frisius: Thiofri_02439
Help
Entry
Thiofri_02439 CDS
T09561
Symbol
glyA2
Name
(GenBank) Serine hydroxymethyltransferase 2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri00260
Glycine, serine and threonine metabolism
tfri00460
Cyanoamino acid metabolism
tfri00630
Glyoxylate and dicarboxylate metabolism
tfri00670
One carbon pool by folate
tfri00680
Methane metabolism
tfri01100
Metabolic pathways
tfri01110
Biosynthesis of secondary metabolites
tfri01120
Microbial metabolism in diverse environments
tfri01200
Carbon metabolism
tfri01230
Biosynthesis of amino acids
tfri01240
Biosynthesis of cofactors
tfri04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Thiofri_02439 (glyA2)
09102 Energy metabolism
00680 Methane metabolism
Thiofri_02439 (glyA2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Thiofri_02439 (glyA2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Thiofri_02439 (glyA2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Thiofri_02439 (glyA2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Thiofri_02439 (glyA2)
Enzymes [BR:
tfri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Thiofri_02439 (glyA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WPL22279
LinkDB
All DBs
Position
2562308..2563564
Genome browser
AA seq
418 aa
AA seq
DB search
MFDTTMQIQGYDDELFQALRDEERRQEEHVELIASENYTSPRVLEAQGSVLTNKYAEGYP
GKRYYGGCDYVDVAERLAIDRAKALFGADYANVQPHSGSQANAAVYMALCQPGDTVLGMS
LAHGGHLTHGAKPNFSGKLYNAVQYGLNPDTGEIDYDQVAALARDHRPKMIVAGFSAYSR
VVDWQRFRDIADEVGAYLLVDMAHVAGLVAAGVYPSPVAIADVTTTTTHKTLRGPRGGLI
LAKSNPEIEKKLNSLVFPGTQGGPLMHVIAAKAVAFKEAMEPEFKTYQQQVMTNARAMAG
VFIERGFEVVSGGTDDHLFLVSFIAQGLTGKDVDAWLGAANITVNKNAVPNDPQSPFVTS
GIRIGTPAITTRGFGEPEARELASWMCDLIDSRGDAGTIEKVKAQVLALCQRFPVYSR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatactacaatgcagattcagggctacgacgatgaacttttccaggcgctgcgc
gacgaggagcgccgccaggaggagcacgtcgagctgatcgcatcggaaaactacaccagt
cctcgggtgctcgaggcccagggctcggtgctgaccaacaagtacgccgagggctatccg
ggcaagcgttactacggcggctgcgactatgtcgatgtggccgagcgtctggccattgat
cgcgccaaggccctgttcggcgccgactacgccaatgtgcagccgcattccggctctcag
gccaatgctgccgtctacatggcattgtgccagccgggcgatacagtgctcggcatgagt
ctggcccatggtggccatctgacccacggtgccaagccaaacttctccggcaagctctac
aatgcggtgcaatacgggctcaacccggacaccggcgagatcgactacgatcaggtcgcc
gccctggcgcgcgatcatcgcccgaagatgatcgttgccggcttctcggcttactctcga
gtggtcgactggcagcgcttccgcgacattgccgatgaggttggtgcctatctgctggtg
gacatggcccatgtcgccggcctggttgccgcaggcgtttatccgagtccggtcgccatc
gccgatgtcaccactacaaccacccacaagacgctgcgtggtccgcgtggcggtctgatt
ttggccaagtccaatcctgagatcgaaaaaaagctcaattccctggttttccccggcacc
cagggtgggccgttgatgcatgtcatcgcggccaaggcggtcgctttcaaagaggccatg
gagcccgagttcaagacctatcagcagcaagtgatgaccaatgcccgcgccatggcggga
gttttcatcgagcgcggcttcgaggtggtctccggcggcacggacgatcatctcttcctg
gtcagcttcatcgcccagggcctgactggcaaggatgtcgatgcctggctgggtgcggcc
aatatcaccgtcaacaaaaatgcggtgccgaacgacccccagtcgccctttgtgaccagc
ggcattcgcatcggcacgccggccattaccacgcgcggctttggcgagcccgaagcacgc
gagctggccagctggatgtgcgatctcatcgacagtcgcggcgatgccggcaccatcgag
aaggtcaaggcgcaggtgctcgcactctgccagcgtttcccggtttactctcgttga
DBGET
integrated database retrieval system
