Thiorhodovibrio frisius: Thiofri_02512
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Entry
Thiofri_02512 CDS
T09561
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tfri
Thiorhodovibrio frisius
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfri03032
]
Thiofri_02512 (gyrA)
03400 DNA repair and recombination proteins [BR:
tfri03400
]
Thiofri_02512 (gyrA)
Enzymes [BR:
tfri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Thiofri_02512 (gyrA)
DNA replication proteins [BR:
tfri03032
]
Prokaryotic type
DNA Topoisomerases
Thiofri_02512 (gyrA)
DNA repair and recombination proteins [BR:
tfri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Thiofri_02512 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WPL22352
LinkDB
All DBs
Position
2647523..2650195
Genome browser
AA seq
890 aa
AA seq
DB search
MPDFAKEVLTVNLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRYMLVDGQGNFGSVDGDSPAAM
RYTEVRMARIAHSLLDDLDKETVDFIPNYDESEYEPTVLPARFPNLLVNGSSGIAVGMAT
NIPPHNLGEIIDACLKLIDEPLTTLDELIDLVPGPDFPTAAIINGVRGIREAYRTGRGRI
QLRARSEVETLKRSGREAIVVTELPYQVNKARMLEKMAELVKEKKLEGIAELRDESDKDG
MRMVIEIKRDHYPDVVLNNLYQHTNMQTVFGINMVGLVDGQPRLLNLKQLLEYFLRHRRD
VVTRRTLYELRKARDRAHLLEGFTVALANIDEVIALIKASASPADAREGLMARTWAPGQV
TGMLERAGAAPSSIESRPDELDPSFGLIGEGDQSGRYRLSERQARAILDLQLQRLTGLEQ
DKIIKEYGEILQKISELLEILRNPERLMQVIRDELTAIRDQYADARRTEIVTDQTDLTLL
DLIAPEDMVVTLSHAGYIKAQPLSEYQAQRRGGKGRIAATTKDEDFIDRLFVANSHDTVL
CFSSFGKVYWLKVYELPQSGRGARGRPVVNLLSLEQGERINATLPVAEYDQDRFIFMATS
KGTVKKTPISDFSRPLSRGLIAIDLHEDEYLIGVAVTDGHQDMMLFTSAGKAVRFNEEAV
RSMGRTAHGVRGVTLEEGQRVISLVIAEPGAVLTVTEKGYGKRTPVEEFPTKGRGGKGVI
AIRTSERNGEQISAVLVRPGDEIMLITDGGTLVRTAVDGISLLGRSTQGVRLINLGEGQR
LAGIERIVALNGDGDEGEGGGNGEDGDPPMIDPDSEQIDGPDAGGGEVED
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgccggattttgccaaggaagtcctgaccgtcaatctcgaagacgagatgcggcagtcg
tatctcgattacgccatgagcgtgatcgtcggccgcgcgctgcccgatgtgcgcgatggc
ctcaagcccgtccatcgtcgcgtgcttttcgcgatgaacgaactcggcaacgattggaac
aagccctataagaaatccgcccgcgtggtcggtgatgtgatcggtaagtaccacccgcat
ggggatacggcggtttacgacaccattgtccgcatggcgcagccgttctcgatgcgctac
atgctggtggacgggcagggcaacttcggctcggtcgatggcgactcacccgccgccatg
cgttataccgaagtgcgcatggcgcgcatcgcgcacagtctgctcgatgacctcgacaaa
gaaaccgtcgatttcatcccgaactacgacgagtccgagtacgagccgacggtcctgccg
gcgcgcttcccgaatctgctggtcaatggttcgtccggtatcgccgtgggcatggcgacc
aacatcccgccgcacaatcttggcgaaattatcgatgcttgcctgaagttgatcgatgaa
cccctgacaacgcttgatgagctgatcgatctggtgccggggccggacttcccgaccgcc
gccataatcaatggtgtgcgcggcatccgcgaggcctatcgcaccgggcgtgggcgcatt
caactgcgtgcgcgctccgaggtcgaaaccctgaagcgtagcgggcgcgaggccatcgtg
gtcaccgagctgccgtatcaggtcaataaggcccgaatgcttgagaagatggccgaattg
gtcaaggagaaaaagctcgagggcatcgccgagctgcgtgatgagtccgacaaggacggc
atgcggatggtgatcgagatcaagcgcgatcattatcccgatgtggtgctgaacaacctg
tatcagcacaccaacatgcagacggtgttcggcatcaatatggtcggcctggtcgatggc
cagccgcgactgctgaatcttaagcaactgctggaatacttcctgcgccaccgccgcgat
gtggtgacccggcgcacgctctacgaactgcgcaaggcacgcgatcgcgcacatctgttg
gaaggtttcacggtcgcactggcgaacatcgacgaggtgatcgcgctcattaaagcctcc
gccagcccggctgatgcgcgtgagggcctgatggcgcgcacctgggcaccggggcaggtc
actggcatgctcgagcgcgccggcgccgccccatcgtcaatcgagtcccgcccggatgag
cttgacccgagcttcgggctgatcggggagggcgatcaatccggtcgttatcgcctgagc
gaacgccaggcgcgcgccattctcgatctgcaactccagcgcctgaccggtctagaacaa
gataagattatcaaggagtacggtgagattcttcagaagatctctgagcttctggaaatt
ctccgtaatcctgagcgcctgatgcaggtcatccgcgacgagctcaccgccattcgcgat
caatacgcggacgcgcgccgcactgagatcgtcaccgatcagaccgacctgacgctgctc
gacctgatcgcgcccgaggatatggtggtgacgctctcgcacgctggctatattaaggcg
cagcctttgtccgagtatcaggcgcagcggcgcggcggcaaagggcgcatcgcggccacc
accaaagacgaagacttcatcgaccggctgttcgtggccaattcccacgacaccgtgctg
tgcttttcgagcttcggtaaggtctactggctcaaggtctacgagttaccgcagtcaggg
cgtggcgcgcgcggacggcccgttgtcaacctgctgtcactcgagcagggcgagcgcatc
aacgccactctgccggtggccgagtacgatcaggaccgcttcatcttcatggccacgagc
aagggcacggtcaagaagacgcccatcagcgacttctcgcgtccgctctcgcgcggcctg
atcgccatcgacctgcacgaggacgaatatctgatcggcgtggcggtgaccgacgggcac
caggatatgatgctcttcaccagtgccggcaaggcggtccgcttcaacgaggaggccgtc
cgctccatgggccgcaccgcccacggcgtgcgcggcgtgacgctcgaagaaggccagcgg
gtcatttcgcttgtcatcgccgaaccaggtgctgtgctgacagtgaccgagaagggctac
ggcaagcgcacgccggtggaagagttcccaaccaagggccgcggcggcaagggcgtgatc
gccattcgcaccagcgagcgcaatggcgaacaaatcagtgcggtgctggtgcgcccgggc
gatgagatcatgctgatcaccgatggcggcaccctggtgcgcaccgccgtcgacggcatc
tcgctgctcggtcgcagcacccagggcgtgcgcctgatcaacttaggcgaaggccaacgc
ctggccggcattgagcggattgtggcgctcaatggtgatggcgacgagggtgagggcggc
gggaacggagaggacggtgacccaccgatgatcgaccccgattccgaacaaattgatgga
ccagatgccggaggcggggaggttgaggattag
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