Thiorhodovibrio frisius: Thiofri_02555
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Entry
Thiofri_02555 CDS
T09561
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Thiofri_02555 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfri03019
]
Thiofri_02555 (rnc)
03009 Ribosome biogenesis [BR:
tfri03009
]
Thiofri_02555 (rnc)
03036 Chromosome and associated proteins [BR:
tfri03036
]
Thiofri_02555 (rnc)
Enzymes [BR:
tfri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Thiofri_02555 (rnc)
Messenger RNA biogenesis [BR:
tfri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Thiofri_02555 (rnc)
Ribosome biogenesis [BR:
tfri03009
]
Eukaryotic type
90S particles
RNase
Thiofri_02555 (rnc)
Prokaryotic type
rRNA processing factors
Thiofri_02555 (rnc)
Chromosome and associated proteins [BR:
tfri03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Thiofri_02555 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
WPL22391
LinkDB
All DBs
Position
complement(2682769..2683470)
Genome browser
AA seq
233 aa
AA seq
DB search
MNRSLALLLNHLSDRPPEHPELFEQALTHRSAGRHNNERLEFLGDALLGFVIAEALWRRF
PDADEGRLTRARASLVKQESLAKQARALALGEYLRMGSGEIRTGGHARDSILSDAFEALL
GAYYLDQGFDGARALILRLFDQGLEQAANSAPTKDPKTRLQESLQAAQRELPEYEVIEAN
GKPHQRHFVVRCLLPDTAEQTRGTGHSRRGAEQQAAEAMLSLLSGVNLKPPHD
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcgctcgcttgcgctcttgctgaaccacctcagtgaccggccacccgagcatccg
gagctgttcgagcaggcactgacgcaccgcagcgcgggccgccacaacaacgagcgcctg
gagtttcttggcgatgctttgctggggttcgtgattgccgaggcgctgtggcgccgattt
cccgacgccgacgagggccgcctgacgcgcgcgcgcgcttcactggtcaagcaggaatcc
ctcgccaagcaggcgcgggcgcttgcgcttggtgagtatctgcgcatgggctcaggagag
attcgcaccggcggccatgcgcgcgactccattctctccgatgctttcgaggcactgctc
ggcgcctactatcttgaccagggctttgacggtgccagggcgctaattctgcgcttattc
gatcagggtttggagcaggcggcaaacagcgccccgaccaaggatccgaaaacccgcttg
caggaatccctgcaagcggcccagcgcgagttgccggagtatgaggtgattgaagccaac
ggcaaaccgcaccaacggcacttcgtcgtgcgctgcctgctgcccgacaccgccgagcag
acacggggtaccggccacagccgcaggggcgccgaacaacaggccgcggaggctatgtta
tctctgctgtctggcgttaatctgaagccaccgcatgactga
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