Thiorhodovibrio frisius: Thiofri_02848
Help
Entry
Thiofri_02848 CDS
T09561
Symbol
rsmB
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
tfri
Thiorhodovibrio frisius
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfri03009
]
Thiofri_02848 (rsmB)
Enzymes [BR:
tfri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
Thiofri_02848 (rsmB)
Ribosome biogenesis [BR:
tfri03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Thiofri_02848 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltr_RsmF_N
Methyltransf_25
Methyltransf_31
DUF3701
FtsJ
Methyltransf_24
PCMT
Motif
Other DBs
NCBI-ProteinID:
WPL22678
LinkDB
All DBs
Position
3016851..3018248
Genome browser
AA seq
465 aa
AA seq
DB search
MAHALANPTSTSAHPRRRHQAPPTAEPGAAVRAAAARVLTQVLEQGRSLTAALAPHGEDA
SAKTQLPARDLPLLRELCFGVLRSLPRLDALSDCLLQRPLKARDQDLRCLLRIGLYQLDA
LALPEHAAVAATVGASANLDKPWARGLLNATLRRFVRERAELCASIEQDEAARTLFPPWL
LARLQTAWPEHWQQLIAASNERAPMFLRVNRLRIAQDAYREQLHTAGIDASPLADCPDGL
QLHAPMPVSQLPGYRDGLVSVQDAGAQHAAALLGAEPGQRVLDACAAPGNKTAHLQELAG
NQLKLWALDHDSSRLQSLATNLARLKLHAEIHQADATQPRGDWAEQDYDRILLDAPCSGT
GVIRRHPDIKWLRRDQDIAALADTQARLLDALWPLIRPRGEMLYVTCSLLPEENTQQIAA
FLARHPDAREARIPVDLGLECQYGRQRLPSAHGSDGFFFARLVKE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgctttggctaacccaaccagcacgagcgctcatccccgtcgtcgccaccag
gcccctcccacagccgagccaggcgcagccgtgcgcgccgctgcggctcgggtgttgacc
caggtgctggaacagggtcgctcgctaacagccgcgttggcgccccatggcgaggacgca
tccgccaagacgcaactccctgcgcgcgacctgccgctgctgcgggaactctgctttggc
gtcctgcgcagcctgccgcgcctcgacgccctgagcgattgcctcctgcaacgcccgctg
aaagcgcgcgatcaagacttgcgctgcctactgcgcattgggctctatcagctcgatgcc
ctcgcgctgcccgagcatgccgcagtggcggcaaccgttggggccagcgccaacctggac
aaaccctgggcgcgcggactcctcaacgccaccctgaggcgctttgtgcgtgaacgcgcc
gaactttgcgcaagtatcgaacaagacgaagcagcccgcaccctcttcccaccctggctg
ctcgcgcgcctgcaaaccgcctggcccgaacactggcaacagctcatcgcggccagcaac
gaaagggcaccgatgttcttgcgcgtgaaccgcctgcgaattgcgcaagacgcctaccgc
gagcaactccataccgccggcattgatgcctcaccgctggccgactgcccggacggactc
caactgcacgcccccatgcccgtcagccagctgcccggttatcgggacggactggtgtca
gtgcaggatgccggagcccagcatgcagcagccctgcttggtgccgaacccggccagaga
gtgctggacgcctgcgccgcacctggcaacaaaaccgcacacctgcaagaactagccggc
aaccagctcaagctctgggcactggaccatgacagctcccgcctgcaaagcctggccacc
aacctcgcccgcctgaagctgcatgccgaaatccaccaagccgacgccacccagccgcgt
ggcgactgggccgaacaagactatgatcggattctgctcgacgcaccctgctctggcacc
ggggtcattcgccgccatccggacatcaagtggctcaggcgcgatcaagatattgccgca
ctggccgacacccaggcgcggctgcttgatgccctctggcccctgatcaggccccggggg
gaaatgctatacgtgacatgctccctgttaccggaggaaaatacgcaacagatcgctgcc
tttctggcgcgacatcccgacgcccgggaagccagaatcccggtcgacttgggactggag
tgccaatatggtcgccaacgactgccgagcgcccatggcagcgacggtttcttcttcgcc
agactggtcaaggaatga
DBGET
integrated database retrieval system
