Thiorhodovibrio frisius: Thiofri_02890
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Entry
Thiofri_02890 CDS
T09561
Symbol
ypfD
Name
(GenBank) 30S ribosomal protein S1
KO
K06959
protein Tex
Organism
tfri
Thiorhodovibrio frisius
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Thiofri_02890 (ypfD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
HHH_7
YqgF
T2SSK
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
WPL22720
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Position
complement(3068010..3070364)
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AA seq
784 aa
AA seq
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MQSITDRLAAELAAHPSQVQAAVALLDEGATVPFIARYRKEVTGGLDDIQLRLLEERLGY
LRELEERRATILHSVDEQGKLSDELREQIETATTKQQLEDLYLPYKPKRRTKAQIAREAG
LEPLADVLLAEPERDPSAEAAAYVDAEKGVADAAAALEGARQILMERFAEEPEVAGRLRE
RLWEQGILVSRVMDGKEAEGAKFSDYFEYREPMAKIPSHRALALFRGRNQGILNLELLAG
EGDDPDADCRHQIASRFGIADRGRPADAWLMETVRKAWRVKLLVRLELDLKGQLLEAAEA
EAIRVFAMNLKDLLLAAPAGRLATIGLDPGLRTGVKVAVIDNTGRVAATGTIYPHAPRQQ
WDQSIASLAELAKKFQVTLVSIGNGTASRETDRLVRDLIKRHPELGLRSMVVSEAGASVY
SASEFASRELPDMDVSLRGAVSIARRLQDPLAELVKIDPKAIGVGQYQHDVNQTGLARSL
DAVVEDCVNAVGVELNTASAPLLSRVSGLNASLAENIIRFREEAGAFASRKQLLKVPRLG
PKAFEQCAGFLRINDSDDPLDGSAVHPEAYPLARRIAEQAGKNIKSLIGDSATLRGLKAK
DFVDERFGEPTVRDILVELEKPGRDPRPEFRAASFMEGVETLADLKPGMVLEGTVTNVTN
FGAFVDIGVHQDGLVHISMLADRFIRDPHEVVHSGQLVKVQVLEIDLERKRIALSMRQDN
SDAGLNRGAAGAKADSGRSRPDSRNDQRKGPSRPSGPGGREQMPSQTPPASAAMAAAFAK
ARKP
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccattaccgaccggctggccgcagagctggctgcccacccgtcccaggttcag
gccgccgtggccttgctcgacgagggcgcaaccgtgcctttcatcgctcgttaccgcaag
gaggtcactggcggactggacgatatccagctccggctgctcgaggaacgcctcggctat
ctgcgcgagttggaagaacgccgcgccaccatcctgcacagcgtcgatgagcagggcaag
ctgagcgacgagctgcgcgagcagatcgagaccgccaccaccaagcagcagcttgaggac
ctgtatctgccctataagcccaagcggcgcaccaaggcgcagatcgcgcgcgaggccgga
ctggagccgctggccgatgtgttgctcgccgagcctgagcgcgacccgagcgccgaggcc
gcagcctatgtggatgccgagaagggcgtggcggatgccgcagcggcgctggaaggtgcg
cgccagatactgatggagcgcttcgccgaggagccggaagtcgccggtcgcctgcgcgag
cgattgtgggagcagggcattttggtctcccgagtaatggacgggaaggaggccgaaggc
gccaagttctccgattacttcgaataccgcgagcccatggcgaaaatcccctcgcatcgc
gcgctggcgctctttcgcggacgcaatcagggcattctgaatctggagctgctggcgggg
gagggcgatgatcccgacgccgattgccgtcatcagatcgcttcgcgctttggtattgcc
gatcgcggccgcccggccgacgcctggctgatggaaaccgtgcgcaaggcctggcgtgtc
aagctgttggtgcgcctggagctggacctgaaaggtcagttgctggaagccgccgaggcc
gaggccattcgcgtcttcgcgatgaacctgaaagacctgctgctggcggccccggccggg
cgcctcgccaccatcggactcgaccccggcctgcgtacgggcgtgaaggtggctgtcatc
gacaacactgggcgggtggccgcgaccggtaccatctatccgcacgccccgcgccagcag
tgggatcagtccatcgccagcctggcggagctggccaagaaattccaggtcaccctggtc
agcatcggcaacggcaccgcctcgcgcgagaccgaccgcctggtgcgagatttgatcaaa
cgccacccggaactgggtctgcgctccatggtggtgagcgaggctggtgcttcggtctat
tcggcctcagagttcgcctcgcgcgagctgccggacatggatgtctccctgcgtggggcg
gtgtccatcgcccgacgactgcaagacccgctggccgagctggtcaagatcgacccaaaa
gccattggcgtgggccagtaccagcacgatgtcaatcagaccggccttgcgcgcagtctg
gatgcggtggtggaggactgtgtgaacgccgtcggggtggagctcaacaccgcctcggcc
ccactgctctcaagggtgtctggtttgaacgccagtctggccgagaacatcattcgcttc
cgcgaggaggccggtgccttcgccagccgcaagcagttgctcaaggtgccgcgtctgggg
ccaaaggcgtttgagcagtgcgccggattcttacgcatcaacgacagcgatgatcccctc
gacggctcagcggtgcaccccgaagcctatccgctcgcgcggcgtatcgccgagcaggcc
ggcaagaacatcaagtccctgattggcgacagtgccacactgcgcggccttaaggccaag
gactttgtcgacgagcgcttcggcgagcccacggtgcgcgatattctggtcgagctggaa
aagcccggtcgcgacccgcgcccggagttccgcgccgcgagctttatggagggcgtcgag
accctcgccgaccttaagcccggcatggtgctggaaggaacagtcaccaatgtcacgaac
ttcggcgccttcgtcgacattggcgtgcatcaagacggcctggtgcatatctccatgctg
gctgatcgcttcatccgcgaccctcacgaggtggtccattctggccagttggtgaaagtg
caggtgctggaaatcgatctggagcgcaagcgcatcgcactcagcatgcgccaggacaac
agcgacgccgggcttaatcgcggtgccgctggcgctaaggccgacagcggcaggagccgg
ccagattccaggaacgatcagcgcaaaggcccctcgcgtccatcaggtcccggcggccga
gagcagatgccatcgcaaacaccgccagccagtgccgccatggccgccgcttttgcgaag
gcgcgtaagccttaa
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