Thiorhodovibrio frisius: Thiofri_03052
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Entry
Thiofri_03052 CDS
T09561
Symbol
cmpR
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
tfri
Thiorhodovibrio frisius
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfri03000
]
Thiofri_03052 (cmpR)
Transcription factors [BR:
tfri03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Thiofri_03052 (cmpR)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
Motif
Other DBs
NCBI-ProteinID:
WPL22874
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Position
complement(3257639..3258706)
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AA seq
355 aa
AA seq
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MKGTLSEKGLGSAGADYLVRHCTLRQLQLLEAIVRLGSFTRAAEELFLTQPTVSMQIKKL
SESIGTPLFHHVGRTVEPTDAGREVYAACRGILNGLANLETKLSDLKGLRRGRLRLGVIT
TATYVAPEILGAFCQRYTGIDVFLNVTNRDQLLERLSAQDDDLYVMGQHHDLGQEVQAVP
FAPNPLVMIARSDHPLVGQPRIPMSRLAEEDLLLREPGSGVRDAVLKHFAAAGVEPRVRM
QLGSSETIKHAILGGLGISALSLHSVRLESGGGRFAVLDVEGFPIRRRWHLVYSRSRELS
LVARTFLDFAIASEPDIRAQLNEAMTALMRVSGVFLSAFDDFDVAKPEPAVAMGA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaccctgtccgagaagggcttgggcagcgcgggggccgattatctggtccgc
cactgcaccctgcgccaactgcaactgctcgaggccattgtgcgtctgggtagcttcacg
cgtgcagccgaggaattgtttctgacgcagccgacggtgtcgatgcagatcaagaagctg
tccgagtctatcggcacaccgctttttcatcatgtcgggcgcacggtcgagcccacggat
gccgggcgcgaggtttacgcggcctgccgtggtattctcaacggcctggccaatctcgag
accaaactctccgatctcaaaggcctgcgccgaggccggttgcgtctgggcgtcatcacc
actgcgacctatgtggcaccggaaattcttggcgctttctgccagcgttacaccggcatt
gatgtgttcttgaatgtgaccaatcgcgatcagcttcttgagcgtttatcggcccaggac
gatgatctctacgtcatgggacagcatcatgatctcggccaggaagtgcaagcggttccc
ttcgcgcccaatccactggtgatgattgcccgcagcgaccatccgctggtcgggcagccg
cgcattcccatgagccgcctggcggaggaagatctgctgctgcgggaaccaggctccggt
gtgcgcgacgcggtgctcaagcactttgccgctgccggggtcgagccccgggtgcgcatg
cagcttggcagtagcgagaccatcaagcatgccattcttggcggtctggggatctcggct
ctgtccctgcattcagtgcggctcgaaagcgggggcgggcgctttgcggtgctcgatgtc
gaaggcttcccgatccgccggcgctggcatctggtctactcgcgctcgcgcgaactgtca
ctggtggcgcgcacttttcttgatttcgccatcgccagcgaacccgacatccgcgcccag
ctcaatgaagctatgaccgccctaatgcgggtttctggcgtttttctgtcggcctttgac
gatttcgatgtcgccaagccggaaccagccgttgcgatgggtgcctga
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