KEGG   Thiorhodovibrio frisius: Thiofri_03180
Entry
Thiofri_03180     CDS       T09561                                 
Symbol
ssb_2
Name
(GenBank) Helix-destabilizing protein
  KO
K03111  single-strand DNA-binding protein
Organism
tfri  Thiorhodovibrio frisius
Pathway
tfri03030  DNA replication
tfri03430  Mismatch repair
tfri03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tfri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Thiofri_03180 (ssb_2)
   03430 Mismatch repair
    Thiofri_03180 (ssb_2)
   03440 Homologous recombination
    Thiofri_03180 (ssb_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tfri03032]
    Thiofri_03180 (ssb_2)
   03400 DNA repair and recombination proteins [BR:tfri03400]
    Thiofri_03180 (ssb_2)
   03029 Mitochondrial biogenesis [BR:tfri03029]
    Thiofri_03180 (ssb_2)
DNA replication proteins [BR:tfri03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Thiofri_03180 (ssb_2)
DNA repair and recombination proteins [BR:tfri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     Thiofri_03180 (ssb_2)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Thiofri_03180 (ssb_2)
Mitochondrial biogenesis [BR:tfri03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    Thiofri_03180 (ssb_2)
SSDB
Motif
Pfam: SSB OSB_SSB DUF3127 tRNA_anti-codon
Other DBs
NCBI-ProteinID: WPL23000
LinkDB
Position
3402818..3403216
AA seq 132 aa
MLNKAQLIGHLGRDPEVRQAKNGQGAVANLTLATSERWKDKTGETQERTEWHRVVLFGRT
AEVAGEYLNKGALVYVEGRLQTRQWQDDAGQDRYTTEIVTDKMKMLGGKNGSAGNSQKAP
TSKANFDDDLPF
NT seq 399 nt   +upstreamnt  +downstreamnt
atgctgaacaaagcccaattgatcggccatctcgggcgcgatcccgaggtccgtcaagcc
aagaacggccaaggcgctgtcgccaacctgaccctggccaccagcgagcgctggaaggac
aaaaccggcgagacgcaggaacgcaccgagtggcaccgcgtggtgctgtttgggcgcacg
gcggaagtggccggcgagtacctcaacaagggtgcgctggtctatgtcgaaggccgcttg
cagacccgccaatggcaggatgatgccggtcaggaccgctacaccaccgagatcgtcacc
gacaagatgaaaatgcttggcggcaagaacggttccgctggcaatagccagaaagcaccg
acatcaaaggcgaatttcgacgatgacctgccgttctga

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