Thiorhodovibrio frisius: Thiofri_04123
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Entry
Thiofri_04123 CDS
T09561
Symbol
yciB_2
Name
(GenBank) Putative L,D-transpeptidase YciB precursor
Organism
tfri
Thiorhodovibrio frisius
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Motif
Other DBs
NCBI-ProteinID:
WPL23914
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Position
4368749..4369921
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AA seq
390 aa
AA seq
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MQQMSIKKMKQSQNRMPPPQARPCVAHQVARRRRHFFGVAADLAIGTGVFRLAKGAVVET
GLGVVEQIRALSAQAIGRLRALMMVATVQGGHRLDGALFATNARPLVSWLTSPLARPCGL
GRIRAAAVGLIPTRLTPVTLMPIFLVVHDRIMRPGTHSHQRRDARPAPNPLANPVQKNSP
REGDLFRFVLGSALVTLLLVSGCAYQQPYPDLDEPDPLAAELPDASQERPVDTSSSPATD
ATKPVAADASAAAGASQQTKLPDPPEAASLPPAKHRQIKIHLKDQQFEYFEDSDLVWSGP
ISSGTRQHPTPRGQFRVQSKDIDKRSGSYTNYFNRPTPMPYSLQFYGPYFIHEGYLPDKP
ASHGCVRLRYEDAKFIFERMRVGDRVTVSN
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagatgtccatcaagaaaatgaaacagagccagaatcggatgccgccgccacaa
gcgcggccctgcgtagcgcatcaggttgcgcgtcgccgtcgccatttcttcggtgtagca
gccgatctggcaatcggcacaggcgtatttcgactcgccaaaggggcagtagtcgagacg
ggtttgggcgtagtcgaacaaatccgcgcactcagcgcacaggccatcggcaggcttcgc
gccctgatgatggtcgcgacagtacagggcggtcatcgccttgatggtgcgcttttcgcg
accaatgcgcggcccctggtttcttggctgacgtcgccccttgccaggccgtgcggcctt
ggccgaatacgagcggctgctgtcgggttgatccccaccaggctgacgcccgttactttg
atgccgatctttctggttgtccatgaccggattatgcgccccggcacccattctcaccag
aggcgagacgctcgcccggcgccaaacccgctggcaaatccggtgcaaaaaaacagtccg
agagaaggcgatcttttccgcttcgtcttggggtctgctctggtcactttgctgctggtc
agcggctgcgcctaccagcagccctaccccgatctcgatgagccggacccactcgccgcc
gagcttccagatgcctcccaagagcgtccggtcgacaccagctcgtcgccagcaactgat
gcgactaaacccgtcgcagcggatgcatcggccgccgccggcgcttcgcaacagaccaaa
ctacccgacccacccgaggctgccagcctgcccccggccaagcatcggcagataaaaatc
cacctgaaagaccaacaattcgagtattttgaagacagcgatctcgtctggtctggtccc
atttcgtctggcactcgacaacatcccacgcccagaggacagttccgggtgcagagcaag
gacatcgacaaacgctccggcagctacaccaattatttcaaccgcccgaccccgatgccc
tactcgcttcagttttatgggccctactttatccacgagggctacctgcccgataagccg
gcctcgcacggctgcgtgcgcctgcgctatgaggatgccaaattcatcttcgagcgtatg
cgggtcggtgatcgagtcaccgtatctaattga
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