Thiorhodovibrio frisius: Thiofri_04471
Help
Entry
Thiofri_04471 CDS
T09561
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Thiofri_04471 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfri03400
]
Thiofri_04471 (ruvB)
Enzymes [BR:
tfri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Thiofri_04471 (ruvB)
DNA repair and recombination proteins [BR:
tfri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Thiofri_04471 (ruvB)
RecFOR pathway proteins
Thiofri_04471 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Rad17
nSTAND3
AAA_22
Mg_chelatase
AAA_18
AAA_16
AAA_14
AAA_28
AAA_17
AAA_33
TIP49
RNA_helicase
AAA_lid_3
ABC_tran
HTH_Cmi2_C
NACHT
TsaE
AAA_24
Motif
Other DBs
NCBI-ProteinID:
WPL24254
LinkDB
All DBs
Position
complement(4772314..4773426)
Genome browser
AA seq
370 aa
AA seq
DB search
MPDTDRLIAPAASSDDQALDRAMRPRSLADYIGQPIVREQMEIFIGAARARDEALDHTLI
FGPPGLGKTTLAHILAHEMGVNLRQTSGPVLEKPGDLAALLTNLDAGDLLFVDEIHRLSP
VVEEVLYPAMEDFQLDIMIGDGPAARSIKLDLPAFTLVGATTRAGLLTSPLRDRFGIVQR
LEYYSAADLALILRRSAGILAVDSDAEGLREIARRSRGTPRIANRLLRRVRDYTQMKADG
RINRVVADQALGMLQVDQQGFDHMDRRLLSAVIEKFAGGPVGVESLAAAIGEERGTIEDV
LEPFLIQQGYLMRTPKGRVATLAAYRHFGLPESVSTGVSAGASAARAHGDLFTGQTTDPG
ETDAKGDYGN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaccgaccgcctgatcgctcccgctgccagttcagatgatcaggcgcttgat
cgcgccatgcgcccgcgcagtctggctgactacatcggccagcctatcgtgcgcgagcaa
atggagattttcatcggcgccgcccgggcgcgcgacgaggcgctcgaccataccctcatt
ttcggtccgcccgggcttggcaagacaacgctcgcgcacattctggcccatgagatgggc
gtgaatctgcgccagacatcaggcccggtgctggaaaagcccggcgatcttgctgcgctt
ctgaccaacctcgacgccggcgatttgttattcgtcgatgaaatccatcgtctcagcccg
gtggttgaggaggtgctctacccagcgatggaagattttcagctcgacatcatgatcggc
gatggcccggcggcgcgctccatcaagctcgatctgccggcctttactctggtcggcgcc
accacccgcgctggcctgctgacctcgccgctgcgtgatcgtttcggcattgtgcagcgg
ctcgaatactactcggctgccgatttggccctgattctgcgtcgttcagccgggattctg
gccgtcgacagcgacgccgagggcctgcgcgaaattgcccgccgttcgcgcggtacgccg
cgcatcgccaatcggctgttacggcgggtccgagactacacccagatgaaagcagacggg
cgaatcaatcgcgtcgtggccgaccaggcactcggcatgctccaggttgatcagcaaggc
ttcgatcacatggatcggcgcctgctttctgcggtgatcgaaaaatttgccggtggtccg
gtgggggtcgagagcctggccgccgccattggcgaggagcgtggcaccattgaggacgtg
cttgagccttttctgatccagcagggctatctgatgcgcacgcccaagggccgggtggcg
accctggcggcatatcggcattttgggttgccggagtctgtttcaactggagtatcagcc
ggtgcatcagccgctcgcgcgcatggcgatctgttcacggggcaaaccacagaccctggg
gaaacagatgccaaaggcgattacggcaactga
DBGET
integrated database retrieval system
