Thiorhodovibrio frisius: Thiofri_04518
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Entry
Thiofri_04518 CDS
T09561
Symbol
miaB
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
tfri
Thiorhodovibrio frisius
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfri03016
]
Thiofri_04518 (miaB)
Enzymes [BR:
tfri01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Thiofri_04518 (miaB)
Transfer RNA biogenesis [BR:
tfri03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Thiofri_04518 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Gcn1_N
Motif
Other DBs
NCBI-ProteinID:
WPL24301
LinkDB
All DBs
Position
complement(4821527..4822966)
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AA seq
479 aa
AA seq
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MTAKLYIQTQGCQMNEYDSGRIADLLRESHGMIRVDRPEDADVLVLNTCSIREKAQEKVF
SLLGRWRPLKARRPDLVIGVGGCVASQEGEALRERAPFVDLIFGPQTLHRVPAMLDALRA
ERSGAPSQRSGAQIQRGGTRIDVSFPELEKFDHLPTPRADGPSAYVSVMEGCSKYCTYCV
VPYTRGPEVSRPFDDVVAEVMALASQGVREINLLGQNVNAYCGLMDDGEPGDLALLIHQV
AAIEGIERIRFTTSHPVEFSDELIDAYAEVPELVDFLHLPVQSGSDRILALMQRGHTALE
YRDKIRRLRAVRPNISIASDFIVGFPGETEADFEATLQLIEDIGFDQSFSFIFSARPGTP
AANYPDDTPDAVKQQRLERLQALINTQAQAISQSMVGGVQRVLLERPSKRDPAQLSGRTE
NNRVVNLDAPGELLGSFVDVCITEALPNSLRGECLREAGVPQIEPSKAASIATGTFTLS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaagctctacatccagacccagggctgccagatgaacgaatacgactccggt
cgtatcgccgatcttctgcgcgagtcccacggcatgatccgggttgatcggcccgaggat
gccgatgtcctggtgctgaacacctgctctatccgcgagaaggcacaggagaaagtcttc
tccctgctcgggcgctggcgcccgctcaaggcccggcgacctgacttggtcatcggcgtg
ggcggctgtgtcgccagtcaggaaggcgaggcgctgcgcgagcgtgcgccctttgtcgac
ctgattttcggtccccagactctgcaccgcgtgcctgccatgctcgacgccctgcgcgcg
gaacgcagcggggcgcccagccagcgcagcggtgcccagattcagcgcggcgggacgcgg
atcgatgtctccttccctgagcttgaaaaattcgatcatctgccaacacctcgggcggac
gggccaagcgcctacgtctcggtgatggagggctgctcgaaatactgcacctactgcgtg
gtgccctacacccgtggccccgaggttagccgacctttcgatgatgtcgtcgccgaggtg
atggccttagcctcgcagggcgtgcgtgagatcaatctgctggggcagaatgtcaacgcc
tattgtggcctgatggacgacggcgagccgggtgatttggcgctgttgattcaccaagtg
gcggccatcgagggcattgaacgcattcgctttaccacctcgcatccggtggagttttct
gacgagttaattgatgcctacgccgaggtgcccgagctggtcgattttctgcatctgccg
gtgcaaagcggctcggatcgcattctggcgctgatgcagcgcggccacacggcgctggag
tatcgggacaaaattcgccgcctgcgtgcggtgcggcccaatatcagcatcgcctcggac
tttattgtcggctttccgggcgagaccgaggcagattttgaggctacgctccagctcatt
gaggacatcggcttcgatcagtccttcagcttcatcttcagcgcgcgccccggtacccca
gcggccaactatccggatgacaccccagatgccgtgaagcaacaaaggctcgaacgcttg
caggcgctgatcaacacccaggcccaggccatcagtcaatccatggttggtggcgtccag
cgcgtgctgcttgagcgtccgtccaaacgcgacccggcgcagctgagcgggcggactgaa
aacaaccgggtggtgaatctcgacgctccgggcgagctgctcggctcctttgtcgatgtg
tgcatcaccgaggcgttgcccaattccctgcgcggcgagtgtcttcgcgaggcaggggtc
ccccagattgagcccagcaaggctgccagcatcgccaccggcactttcaccctatcttga
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