Thiorhodovibrio frisius: Thiofri_04652
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Entry
Thiofri_04652 CDS
T09561
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase I precursor
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thiofri_04652 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfri03019
]
Thiofri_04652 (pcnB)
Enzymes [BR:
tfri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Thiofri_04652 (pcnB)
Messenger RNA biogenesis [BR:
tfri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Thiofri_04652 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
WPL24432
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All DBs
Position
4972928..4974367
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AA seq
479 aa
AA seq
DB search
MCAHPGIALQSHFIRRQAFSHIGVFLVSLSSLTEPTPSIVPRPEHSISRANISANAVRVL
NRLKQSGYQAYLVGGGVRDLLLGHEPKDFDVATDARPEDVRRVFRNCRLIGRRFRLAHVF
FGAEIVEVATFRAANVDLGDEDARQIENGMILRDNVFGSIAEDALRRDFTVNALYYNIAD
FSLVDYVEGLADIAAGRLRLIGDDPIARYREDPVRMLRAVRFACKLGFVIEPRCETPLVE
LAPLLRDVPPARLFEEILKLFQAGFALPAFEKLRHYGLFAELFPETEDCLAMQEEDFPIT
FVNRGLDNTDRRVQEGKPIAPFFLFAVLLWEPVRRQYLQLLEAGHGWSEAMTTASSMIAG
RQQAYVAIPKRFGLPMREIWALQPALERRRGKRPLALIGHPRFRAAYDFLLLRAESGEVD
PELAAWWTQFQEVNPSERAAMATERKPSRKSRRRRRRKAPAEKTDQPATDPSGQTAPPA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgctcatccaggcatcgctttacagagccactttattcgtagacaggcgttttca
catattggggtatttttagtttccttgtcttccttgaccgaacccacaccaagcattgtg
cctcgtccggagcacagcatttcgcgcgccaatatcagcgcgaatgcggtcagggtgctc
aatcgcttgaagcagagcggctatcaggcttatctggtcggcggcggtgtgcgcgacttg
ttgcttggccacgagccgaaggattttgacgttgccacggacgcgcggcccgaggatgtg
cggcgggtgtttcgcaactgccggctgatcgggcgacggtttcgcttggcgcatgtgttc
tttggtgctgagatcgtcgaggtcgcaacattccgggcggcaaatgtcgatcttggtgac
gaggatgcgcgccaaatcgaaaacggcatgatcctacgcgacaatgtatttggctctatc
gccgaggatgccttgcgacgagatttcaccgtcaatgcgctctactacaacatcgcggat
ttctcgctcgtcgattatgtcgagggacttgccgacattgccgccgggaggctgcggctg
atcggcgatgacccgatcgcccgctatcgcgaagacccggtgcgcatgctgcgcgcggtg
cgctttgcctgcaagctgggttttgtgatcgaaccgcgctgcgagacgcccttggtcgag
ctggcacctttgttgcgcgatgttccgccagcgcggctgtttgaagagattctcaaattg
ttccaggccggcttcgccctgccggcgttcgagaagctgcgccattatgggctgtttgcc
gagctcttccctgagaccgaagactgcctcgcaatgcaggaggaggatttccccatcacg
ttcgtgaaccgggggctggacaacaccgaccgccgcgttcaggaaggcaagcctatagcg
cccttttttctgtttgcggtgctcttgtgggagccagtacgccgtcagtacttacaattg
cttgaggctggccatggctggtcggaggccatgaccactgcctcgagtatgatcgccggg
cgtcagcaggcgtatgtggccatccccaagcgatttggcttgccgatgcgcgagatctgg
gctttgcagccggcgctcgaacgccgtcggggcaagcggcccttggccttaattgggcat
ccgcgcttccgcgccgcctatgattttctgctgctgcgggctgagtccggcgaggtcgac
ccggagctggctgcctggtggacgcagttccaggaggtcaacccatcagagcgcgcggcc
atggcaacggagcgcaagcccagccgcaagagccggcgcagacgtcgacgcaaggcacca
gccgagaagaccgatcagccggcgaccgatccctccggtcaaacagcacctccggcctaa
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