Thiorhodovibrio frisius: Thiofri_04723
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Entry
Thiofri_04723 CDS
T09561
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
tfri
Thiorhodovibrio frisius
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfri03019
]
Thiofri_04723
Messenger RNA biogenesis [BR:
tfri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Thiofri_04723
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Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
HAUS8
SKI
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WPL24503
LinkDB
All DBs
Position
complement(5048581..5049447)
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AA seq
288 aa
AA seq
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MDFIIVSGLSGAGKSVALNTLEDIGYNCIDNLPLFLLSELALGLLQSEPVLCPECVGTAV
GIDARSNPDDLRQLPQVLVSLGKQGIIPRLIFLEAQTERLMTRFSETRRKHPLTSEQRSL
AEAIDYERELLEPLRQVADAHIDTTHINIHELRDLVRGCLGDGQKLSTSILLQSFGFKKG
VPESFDFVFDVRCLPNPHWQEELRGQTGRDLAVINYLEGFEEVVAMRDDLIAFLDRWTPC
FERDGRSYLTIAIGCTGGQHRSVYMAEAVRAHFDRGGRRALVRHRELP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggacttcattatcgtcagtggactctcaggcgcgggcaagagcgtggcgctcaatacg
ctcgaagatatcggctataactgtatcgataacctgccgctgttcctgctaagcgagctg
gctctggggttactccagagcgaaccggtcctgtgcccggagtgcgttggcaccgccgtt
ggcatcgatgcacgcagcaacccggacgatctgcgccagctaccacaggtgttggtgtcg
ctcggcaaacagggcatcatcccacggctgatttttctcgaggcccagaccgaacggctg
atgacgcgctttagcgagacacggcgcaaacacccgctgaccagcgagcagcgctccctg
gccgaggccatcgactacgaacgcgaactgctcgaacccctgcgccaggttgccgatgcg
catatcgacaccacccacattaacatccatgaattgcgcgatctggtgcgtggctgtctc
ggtgacgggcaaaagctcagtacctccatcctgctgcaatccttcggctttaagaagggc
gtgcccgagtctttcgacttcgtcttcgacgtgcgctgcctgcccaatccgcactggcag
gaggaactgcgcggccaaaccggacgcgatctggctgtgattaactatcttgaaggtttt
gaggaggtggtggccatgcgcgatgacctcatcgcctttctggaccgctggaccccctgc
ttcgagcgcgacgggcgcagctacctgaccattgccatcggctgcaccggtggccagcat
cgctccgtctacatggccgaggccgtgcgcgcgcattttgatcgcggcgggcgccgcgcc
ctcgtccgccaccgggagctgccgtga
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