Thiorhodovibrio frisius: Thiofri_04801
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Entry
Thiofri_04801 CDS
T09561
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
tfri
Thiorhodovibrio frisius
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfri03009
]
Thiofri_04801 (rluD)
Enzymes [BR:
tfri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Thiofri_04801 (rluD)
Ribosome biogenesis [BR:
tfri03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Thiofri_04801 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
WPL24581
LinkDB
All DBs
Position
complement(5153796..5154749)
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AA seq
317 aa
AA seq
DB search
MESIELKLPLSAAGRRLDQTLAELLPDYSRGRIQHWLETGQLRVDGEARRRRDKVRGGEQ
ICLHTNPALEVQTAAPAQEIDFALVHEDAHLLVINKPAGLVVHPGAGQPDGTLLNALLHH
NPELAALPRAGIVHRLDKDTSGLMVVAKSLIAHQSLVTQLQARLVHRDYRALVRGDLISG
GSVDQPIGRHPQARTKMAVVASGRPAISHYRVLKRFGHCTLLGVRLETGRTHQIRVHMAH
LRHPLVGDPVYARARQPFPAHAPAAEALRNFPRQALHAIGLALEHPASGETLSWEIPMAP
DFAQLLTELDQPPEVRE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaatagaactcaagctcccactaagtgctgctgggcgtcggcttgatcagacg
ctcgcggagttgctgccagattactcgcgcgggcgcatccagcactggcttgagaccggc
cagttgcgggtggatggcgaggctcgccgccggcgcgacaaggtgcgcggtggcgagcag
atctgtctgcacaccaatccggctttggaggtgcaaaccgccgctccggcgcaggagatt
gatttcgctctggtgcatgaggacgcgcatctgctggtcatcaacaagcccgccgggctg
gtagtgcatccaggcgccggtcagcccgacggaaccctgctcaacgcgctgttgcatcac
aatcccgagctggccgcgctgccgcgtgccggcatcgtgcaccggctcgataaggacacc
agcggactcatggtggtggccaagtcccttatcgcccatcagtccttggtcacccagttg
caggcacgcctggtgcatcgcgactaccgtgccctggtgcgcggcgacctgatcagcggc
ggcagcgtcgatcagcccatcggccggcatccgcaagcgcgcaccaaaatggccgtggtc
gcctccgggcgcccggccattagccactaccgggttctcaagcgctttggccattgcacc
ctgcttggcgtgcgcttggagaccggtcgcacccatcagattcgcgtccacatggcacac
ctgcgccacccgctggtaggcgatccagtctatgcgcgcgcgcgccagcccttccccgcc
catgcgccggcggccgaggcgttgcgtaactttccgcgccaggccctgcatgccatcggc
ctagcactggaacatcccgcaagcggcgaaaccctgagttgggagatcccgatggccccc
gattttgcgcagctactaaccgaactcgaccagccgccggaggtgcgtgaatga
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