Takifugu flavidus (sansaifugu): 130513024
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Entry
130513024 CDS
T09160
Symbol
nrxn1a
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin 1a
KO
K07377
neurexin
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130513024 (nrxn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130513024 (nrxn1a)
Membrane trafficking [BR:
tfs04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
130513024 (nrxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Prokineticin
Motif
Other DBs
NCBI-GeneID:
130513024
NCBI-ProteinID:
XP_056867547
LinkDB
All DBs
Position
1:complement(28470754..28529058)
Genome browser
AA seq
1503 aa
AA seq
DB search
MSVSTSVCMSVMAVCVWAAAPLLFLGLCLCSVGGHAQGEVLEFGGVSSQWGRFPVWNACC
ESVLSFSLRTHSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAEPAELQSGVAVSD
GRWHAVRVKRNWKNTSLEVDGRVEGWAEVKSKRRDMTVFSHTYIGGVSPELHSSPLRLTS
PAVREQTAFRGWITAVSINGSSVALDSSEGVTVTAGCGPDHQCQNGGVCSVINHRAVCDC
SDTGYQGNDCSEEHNYTPGLAHLMIGDQAREEYVATFKGSEFFCYDLSPNPIQSSSDEIT
LSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHD
VKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSP
VSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKVSGVVSFKCESVATLDPVTFDTPES
FVALNKWTAKKAGSISFDFRTTEPNGLMLFSHGKPRQQQRKDSRSPPTVKVDFFAIEMLD
GHLYLLLDMGSGTTKTKAIDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSESL
DLDDTLYLGGLPEDRAGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVG
VKPSCSREPPKQCLSNPCQHNGNCREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFM
KVQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRNSADTLRLELDGGRVRLTVNLDCIRI
NCTASKGPETIFAGSGLNDNEWHTVRVNRRGKSLKLTVDDLQPVEGQMAGDHTQLEFHNV
ETGIVTEKRFMPAVPSNFIGHLQGLALNGMPYIDLCKNGDIDYCELNAVIGYKSIVADPV
TFRSRSSFVTLPTLQAYYSMHLFMQFKTTSPDGLILYNRGDGNDFIVIELVKGYLHYISD
LGNGAHLIKGNSNSPLNDNHWHNVHISRDTNNLHVVKIDTKVTTQTTMGAKNLDLKGDLY
IGGVSKEMYRDLPKLVHSREGFQGCLATVDLNGRLPDLLADALATMGQVERGCEVTLMKA
DLQGPSTTCQEDSCSNQGVCLQQWEGFTCDCSMTSYAGPLCNEAGTTYIFGRDGGVVMYT
WPPNERPSTRADRLALGFSTQQKHAVLLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDI
NIEESSKFVNDGKYHVIRFTRSGGNATLRLDDLSVIEHYPSGNIDNERLAIARQRIPYRL
GRVVDDWLLDKGRQLTIFNSQTTVRVGGGERGXGMFQGQLSGLYYNGLRVLNMAAEGHPH
VRVEGSARLVGDMPSSSITPQSSAAGXGNRSDSAPSISDITTTTATNRKQGSTQHSQAAD
DLLVASAXCPSDDEDIDPCDPSSARPPVSEGKLFPGPSEVVRESSSTTGMVVGIVAAAAL
CILILLYAMYKYRNRDEGSYHVDESRNYISNSATQPNGSAKDKPLGITKISKNKKNKDKE
YYV
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgagcacaagtgtgtgtatgagtgtcatggcagtgtgtgtctgggcagcagcc
cccctgctcttcctggggctgtgcctatgtagtgtaggggggcatgctcaaggggaggtc
ctggagtttgggggtgtgtccagccagtgggggaggttcccagtgtggaacgcctgctgt
gaaagtgtgctgagcttcagcctgcggactcacagccaggagggcctcctgctctacctg
gacgacgaaggcttctgcgacttcctggagctgctgctcctccacggccacctgcgcctg
cgcttctccatcttctgcgccgagcctgccgagctgcagtccggcgtggcggtgagcgac
ggccgctggcacgccgtgcgcgtcaagcggaactggaagaacacctcgctggaggtggac
gggcgagtggagggatgggcggaagtgaagagcaagagaagagacatgacggtgttcagc
cacacctacattggcggggtgtcgcccgagctccactcctcccccctacgtctcacgtcc
ccggcggtgcgagaacaaacagccttccggggctggatcacggcggtgagcatcaacggc
tcgtcggtggcactggacagctcagagggcgtcacggtaacagctggctgtgggccggac
caccagtgccagaacggaggggtgtgcagcgtcatcaaccaccgggccgtctgcgactgc
tccgacactggttaccaaggcaacgactgcagcgaagagcacaactacaccccaggtctg
gcacacctgatgattggcgaccaagctcgggaggagtacgtggccaccttcaaaggctcg
gagttcttctgctacgacctgtcgcccaaccccatccagtccagcagcgacgagatcacg
ctctccttcaagacgctgcagcgcaacggcctgatgctgcacaccggcaagtcggccgac
tacgtcaacctggcgttgaaaaacggggccgtgtcgctcgtcatcaacctcggctccggg
gccttcgaggccctggtggagcccgtcaacggcaagttcaacgacaacgcctggcacgac
gtgaaggtcacgcgcaacctgagacagcactcaggcattggacacgctatggtgaccatc
tctgtggacggcatcctgaccaccacgggctacacgcaggaggactacaccatgctgggc
tcagacgacttcttctacgtggggggcagccccagcactgccgacctgccgggttctcca
gtcagcaataacttcatgggctgtcttaaagaggtggtctacaagaacaacgatgtgcga
ctggagctgtccagactggccaagcagggagacccaaagatgaaggtgagtggcgtggtg
tccttcaagtgtgagagcgtggccacgctggacccggtgacctttgacaccccagagtct
tttgtggcgctgaacaagtggacagcaaagaaggcaggatcgatctccttcgacttcagg
accacggagcccaacgggttgatgctgtttagccacggcaaacccagacagcagcaacgc
aaggactcgcgctcgccccccacagtcaaggtggatttttttgccattgagatgctggac
gggcacctgtatttgctcctggacatgggctcaggaaccaccaagaccaaggccatcgac
aggaaggtcaacgatggggagtggtaccacgtagacttccagagagacggacgctcggga
accatctcagtgaacagcgtaagaaccgcctacaccgcccctggagacagcgagagcctg
gacctggatgatactttgtaccttgggggtctgcctgaagaccgggctggactcatcttc
cccacagaggtgtggaccgctctgttgaattatggctacgtgggctgcatcagagacctg
tttgtggacgggcagagcaaagacatccggaggctggccgaggcccagagggcggtgggt
gtgaagccctcctgctcccgggagcctccgaagcagtgcctgtccaacccctgccagcac
aacggcaactgcagggaggggtggaaccgttatgtctgcgactgctctgggaccggctac
ctgggacgttcctgtgagagagatgcgaccattctgtcctacgacggcagcaagtttatg
aaggtgcagctgcctgtggtgatgcacacggaggcggaggacgtctccctgcgcttccgc
tcccagcgggcctacggcatcctcatggcaaccacatcccgtaactctgcagacaccctc
cgtctggagctggatggaggccgcgtccgactcaccgtcaacttagactgtatcaggata
aactgtacagccagtaaaggcccagagaccatctttgcgggttcgggcctcaatgataat
gagtggcatacggtgagggtaaaccggcgtggaaagagcctcaaactcaccgtggacgac
ctgcagcctgtcgaaggtcagatggcgggtgaccacacccagctggagttccacaacgtg
gagacgggtatcgtgaccgagaagcgcttcatgcccgccgtgccctccaattttatcggc
caccttcagggcctggcgctgaacggtatgccgtacattgacctgtgcaagaacggcgac
atcgactactgtgagctgaacgccgtcatcggctacaagagcatcgtggccgaccccgtg
accttccgctcgcgctccagttttgtcacgctgcccacgctgcaggcctactactccatg
catctcttcatgcagttcaagaccacctcgcccgacgggctcattctgtacaaccgaggc
gacggcaacgacttcatcgtgatcgagctggttaaaggctacctgcactacatctctgat
ctgggcaacggagcacatctgatcaaaggcaactccaacagccccttaaacgacaaccac
tggcacaacgtgcacatatctcgagacactaacaatctccacgtggtgaagatcgacacc
aaagtcaccacgcagaccaccatgggtgccaagaacctggatctaaaaggtgacctttac
atcgggggagtctccaaggagatgtaccgagacctgccgaagctggtccactcccgcgag
ggctttcagggttgtctcgccacggttgatctaaacggccgcctccctgaccttttggcg
gacgccttagcaaccatgggacaggtggagcgaggctgtgaagttacattgatgaaagct
gacttgcaaggtcccagcaccacgtgccaggaggactcctgctccaaccagggcgtgtgc
ctgcagcagtgggagggcttcacctgcgactgcagcatgacctcgtacgccggcccgctg
tgcaacgaagctgggaccacctacatctttggccgggacggcggggtggtgatgtacacg
tggccccccaacgagcgccccagcaccagggcggacagactggccctcgggttcagcacc
cagcagaaacacgccgtcctgctgcgggtggacagtgcgtcgggcctgggagactacctt
cagctgcagatagacaaaggcaacatcagagtcgtcttcaacgtgggcaccgatgacatc
aacatcgaggagagctccaagtttgtcaatgacgggaagtaccacgtcatccggttcacc
cgcagcgggggcaacgccacccttcggctggatgacctctccgtcatagagcactacccc
tcaggcaacattgataacgagcgcctggccatcgccagacagcgaatcccctatcggctc
ggtcgagtagttgacgattggctactcgacaaaggtcgtcagctgaccatcttcaacagc
cagacgacggtgcgtgtgggggggggcgagcgaggcngcggcatgttccaggggcagctg
tcgggcctctactacaacggcctgcgcgtcctcaacatggcggccgagggacacccccac
gtccgggtggaggggagcgcgcgcctggtcggggacatgccgtcctcctccatcacgccg
cagtccagcgccgccggcngggggaaccgctccgactcggcgccgtccatcagtgacatc
acaaccaccacggccaccaacaggaagcaggggtcaacgcagcactcgcaggcagcagac
gacctgctggtggcttcggccngatgtcccagcgacgacgaggacatcgacccctgcgac
cccagctcagctcgccctcctgtgtcggaggggaaactgttcccagggccgtccgaggtg
gtgcgggagagcagcagcaccacggggatggtggtgggcatcgtggcggcggcagccctc
tgcatcctcatcctcctctacgccatgtacaagtaccgcaaccgcgacgaggggtcctac
cacgtggacgagagccgcaactacatcagcaactcagccacgcagcccaacggcagcgcc
aaggacaagccgctgggcatcaccaagatctccaagaacaagaagaacaaggacaaggag
tactacgtctga
DBGET
integrated database retrieval system