Takifugu flavidus (sansaifugu): 130513305
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Entry
130513305 CDS
T09160
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04814
Motor proteins
tfs05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130513305 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130513305 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130513305 (dctn1b)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130513305 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfs04812
]
130513305 (dctn1b)
Membrane trafficking [BR:
tfs04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
130513305 (dctn1b)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
130513305 (dctn1b)
Cytoskeleton proteins [BR:
tfs04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
130513305 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
130513305
NCBI-ProteinID:
XP_056868010
LinkDB
All DBs
Position
16:complement(13550422..13566491)
Genome browser
AA seq
1283 aa
AA seq
DB search
MMSQSRRNVHPRTGSSRMSSDGGGRPVKVGSPVEVIGKGQRGAVAFIGNTLFASGKWVGV
ILDEAKGKNDGTVQGKRYFTCEENHGIFVRQSQIQLVDDGADTTSPETPEPGAGKALKRE
ILESSKTTKLQRGMKPKKVAHVSLTPAPRKTTARRPKQPGRPAASGGKGAASGSASASAG
EMSSSEPSTPAQTPLAAPVIPTLHSPGNPPPPPPSKEDVTMATQEEEALRGQVKDLEEKL
ETLKMKRTEDKAKLKELEKHKIQLEQLQEWKTKMQEQQAELQKHLKEAKREAKEAMEAKE
RYMEEMSDTADAIEMATLDKEMAEERAESLQLEVDSLKERVDELTMDLEILKHEIEEKGS
DGAASSYQVKQLEEQNARLKEALVRMRDLSASEKQEHVKLQKQMEKKNMELDTQRSQKEK
LQEEMAAAEKTIDELKEQVDAALGAEEMVEMLTERNLDLEEKVRELRETVTDLEAINEMN
DELQENARETELELREMLDLGAARVREAEKRVEASQETVADYQQTIKKYRELTAHLQEVN
RELTSQQEASAELQQQPPAEMFDFKIKFAETKAYAKAIEMELRKMEVGQANRHVSLLTSF
MPESFLRHGGDHDCILVLLLIPRLICKAELIGKQAQEKFDLHENCVERAGLRGAAGEQLS
FAGGLVYSLSLLQATLHRYQQALTQCSVEVYKKIGALYPEMSVHERSLDFLIDLLHKDQL
DETVNVEPLTKAIKYYQHLYSIHLAEQPEDCTVQLADHIRFTQSALDCMAVEVGRLRAFL
HVGQEKADLAVLLKDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALSFGQQVSDTLSECR
KHLTWVVAVLQEVGAAGAQMMSPLGEQEGLAAGKMEDVAFKAGEQIYGSQGANPYDCLRQ
SCSIVIATMNKMATAMQEGEYDSEKPQNKNPPPVEVRAAALRAEITDAEGLGLKLEDRET
VIKELKKSLKIKGEELSEANVRLSLLEKKLDSSSKDADERVEKIQIQLDEAQTLLKKKER
DFEETMDALQADIDQLESEKAELKQRVSSQAKMGLEGRGGAASGVASIVTGIAGEEQKAT
MMSGVGAGSGLQVVDSPLLTQQIEAQRLCIKHLKNENNRLKAEKMRAQLASLPPLHVPKL
PSRQEGHPEVLSSALYRKADQLLETLLQMSANVKVVDVTGRSPVTPSAQLLEQTARLQSL
SDTLARLKDEVAEHIVNQQRGARASSDFATFPSTLFVKAKEEKQADAVLVGRVMVPCPRG
QEQVHRLVLPQRQLQRIHSLLRS
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacagtcgaggaggaacgtgcacccccggaccggcagcagcaggatgagctca
gacgggggcggccggcccgtcaaagtgggctccccggtggaggtgatcggcaaggggcag
cgcggcgccgtggccttcatcggcaacaccctcttcgcctccgggaagtgggtgggagtg
atcctggacgaggccaagggcaagaacgacggcaccgtgcagggcaagcgctacttcacc
tgcgaggagaaccacgggatatttgtgcgacagtcgcagatccagctggtcgacgatgga
gcagacacgacctccccagagacccctgagccgggcgctggcaaggctctcaaacgagag
atcctggagtcgtccaagacgaccaaactgcagcgaggaatgaagcccaaaaaggtggcg
catgtttctctgacgcctgcacctcgaaagaccacggccagaaggcccaagcagccaggt
cgtcctgcagcctccggtgggaagggcgccgcctctggctcggcctcggcctcggccggg
gagatgagcagcagcgagcccagcacgccggctcagacccctctggccgctcccgtcatc
ccaaccctgcactcgccaggaaaccctccgccgccgccccccagcaaggaggacgtcacc
atggcaacacaggaggaggaggccctccgcggacaggtgaaggacctggaggagaagctg
gagacgctgaagatgaagcggacagaggacaaggccaaactgaaggagctggagaagcac
aagatccagctggagcagctgcaggagtggaagaccaagatgcaggagcagcaggcagag
cttcagaaacatctgaaagaggccaagagggaggccaaggaggccatggaggcgaaggaa
cgttacatggaggagatgtcagacacagcagacgcaatagaaatggccacgctagacaag
gagatggctgaggagcgggccgagtctctgcagctggaggtcgactccctcaaggagaga
gtggacgagctcaccatggacctggagatcctcaagcacgagatcgaggagaaaggttca
gatggtgctgcctccagttaccaggtgaagcagctggaggagcagaacgccagactgaag
gaagcgctggtcaggatgcgtgatctgtcggcgtcagagaagcaggaacacgtgaagctg
cagaagcagatggagaagaagaacatggagctggacactcagaggagccagaaggagaaa
ctgcaggaagagatggcggctgcagaaaagaccatcgacgaactgaaagagcaggtggac
gcagccttgggggcagaggagatggtggagatgctgacagagaggaacctggacctggag
gagaaagtccgggagctgagggagacggtcaccgacctggaagcgataaacgagatgaac
gatgagctgcaggagaacgccagagagacggaactggagctgagggagatgttggatctg
ggcgctgccagagtccgagaggcggagaaacgggtggaggcgtcgcaggagaccgtggcc
gattaccagcagaccatcaagaaataccgcgagctcacggctcacctgcaggaggtgaac
agagagctgaccagtcagcaggaagcgtccgcagagctgcagcagcagccgccagcggag
atgtttgatttcaagatcaagttcgccgagacgaaggcctacgccaaggccatcgagatg
gagctgaggaagatggaggtgggtcaggccaacaggcacgtgtcccttctgacctccttc
atgccggagtccttccttcgccacggcggcgatcacgactgcatcctggtgctgctgctc
atccccagactcatttgcaaggccgagctgatcggcaaacaggctcaggagaagtttgac
ctgcatgagaactgtgtggagcgggcggggctgcggggagctgctggcgagcagctgagc
ttcgccgggggtttggtctactctctgagtctgctgcaggccacgctccacagataccag
caggctctgacccagtgcagcgtggaggtctacaagaagatcggcgctctgtatcccgag
atgagcgtccacgagcgttccctggatttcctcatcgacctgctgcacaaagaccagctg
gacgagaccgtcaacgtggagccgctgaccaaggctattaaatactatcagcacctctac
agcatccacctggcagagcagcctgaggactgcaccgtgcagctggccgatcacatcaga
tttacccagagtgccctggactgcatggcggtggaggtggggcggctccgggccttcctg
cacgtgggtcaggagaaggccgacctcgccgtgctgctgaaagacctggagacgtcctgc
agcgacatccgacagttctgcaagaagatccgcaggaggatgcccggaactgatgctcca
ggcatcccagcagcactcagctttggacagcaggtgtccgacaccctctccgagtgcagg
aaacacctcacctgggtggtggccgtcctgcaggaggtgggggcagccggcgctcagatg
atgtcacctctgggtgaacaggaggggctggcagctggcaaaatggaggatgtggctttt
aaggctggagagcagatctatggatcccagggcgccaacccctacgattgcctgcgtcag
tcctgcagtatcgtcatagcaaccatgaacaagatggccactgccatgcaggagggagag
tacgactccgagaagcctcaaaataagaaccctccacccgtggaagtacgagcggcggct
ctccgggcggaaatcacagatgctgaaggtctcggcctgaagctggaggacagagagacg
gtcatcaaagagctgaagaagtcgctcaagatcaagggggaagagctgagcgaggccaac
gtgcgcctcagcctgctggagaagaagctggacagttcgtccaaagacgcagacgaacga
gtggagaagatccagattcagctggacgaggctcagactctgctgaagaagaaagagagg
gacttcgaggagaccatggacgctctgcaggccgacatcgaccagctggagtctgagaag
gccgagctgaagcagcgggtcagcagccaggcgaagatgggcctcgagggccgaggaggc
gccgcgtctggagtcgcttccatcgtgacgggaatagcaggagaggaacaaaaagcaacc
atgatgtccggcgttggcgctggttcaggcctccaggtggttgattcgccgctgctgact
cagcagattgaggctcagagactctgcatcaagcacctgaagaatgaaaacaacagactg
aaggctgagaagatgcgcgctcagctcgcctccctgcctcccctgcacgtgcccaagctc
ccctccaggcaggagggccaccctgaagtgctctccagcgccctctaccgcaaggccgac
cagctcttggaaacacttctgcagatgagcgccaacgtcaaggtggtggacgtcaccggg
aggtctccagtgacacctagtgcccagctgctggaacagacggctcggctgcagtcgctg
agcgacaccctggccaggttaaaggacgaggttgcagagcacatcgtgaaccagcagcgt
ggcgctcgagcctcctcagatttcgccaccttcccctcgaccttgttcgttaaggcgaag
gaggagaagcaggccgacgcggtgctggtggggcgagtcatggtgccgtgtcctcgcggt
caggagcaggtccaccgcctggttctgccgcagcgccagctgcagaggatccacagtctg
ctccggagctaa
DBGET
integrated database retrieval system