KEGG   Takifugu flavidus (sansaifugu): 130513305
Entry
130513305         CDS       T09160                                 
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
  KO
K04648  dynactin 1
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs04814  Motor proteins
tfs05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    130513305 (dctn1b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    130513305 (dctn1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tfs04131]
    130513305 (dctn1b)
   03036 Chromosome and associated proteins [BR:tfs03036]
    130513305 (dctn1b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tfs04812]
    130513305 (dctn1b)
Membrane trafficking [BR:tfs04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    130513305 (dctn1b)
Chromosome and associated proteins [BR:tfs03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Dynactin complex
     130513305 (dctn1b)
Cytoskeleton proteins [BR:tfs04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dynactins
     130513305 (dctn1b)
SSDB
Motif
Pfam: Dynactin CAP_GLY
Other DBs
NCBI-GeneID: 130513305
NCBI-ProteinID: XP_056868010
LinkDB
Position
16:complement(13550422..13566491)
AA seq 1283 aa
MMSQSRRNVHPRTGSSRMSSDGGGRPVKVGSPVEVIGKGQRGAVAFIGNTLFASGKWVGV
ILDEAKGKNDGTVQGKRYFTCEENHGIFVRQSQIQLVDDGADTTSPETPEPGAGKALKRE
ILESSKTTKLQRGMKPKKVAHVSLTPAPRKTTARRPKQPGRPAASGGKGAASGSASASAG
EMSSSEPSTPAQTPLAAPVIPTLHSPGNPPPPPPSKEDVTMATQEEEALRGQVKDLEEKL
ETLKMKRTEDKAKLKELEKHKIQLEQLQEWKTKMQEQQAELQKHLKEAKREAKEAMEAKE
RYMEEMSDTADAIEMATLDKEMAEERAESLQLEVDSLKERVDELTMDLEILKHEIEEKGS
DGAASSYQVKQLEEQNARLKEALVRMRDLSASEKQEHVKLQKQMEKKNMELDTQRSQKEK
LQEEMAAAEKTIDELKEQVDAALGAEEMVEMLTERNLDLEEKVRELRETVTDLEAINEMN
DELQENARETELELREMLDLGAARVREAEKRVEASQETVADYQQTIKKYRELTAHLQEVN
RELTSQQEASAELQQQPPAEMFDFKIKFAETKAYAKAIEMELRKMEVGQANRHVSLLTSF
MPESFLRHGGDHDCILVLLLIPRLICKAELIGKQAQEKFDLHENCVERAGLRGAAGEQLS
FAGGLVYSLSLLQATLHRYQQALTQCSVEVYKKIGALYPEMSVHERSLDFLIDLLHKDQL
DETVNVEPLTKAIKYYQHLYSIHLAEQPEDCTVQLADHIRFTQSALDCMAVEVGRLRAFL
HVGQEKADLAVLLKDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALSFGQQVSDTLSECR
KHLTWVVAVLQEVGAAGAQMMSPLGEQEGLAAGKMEDVAFKAGEQIYGSQGANPYDCLRQ
SCSIVIATMNKMATAMQEGEYDSEKPQNKNPPPVEVRAAALRAEITDAEGLGLKLEDRET
VIKELKKSLKIKGEELSEANVRLSLLEKKLDSSSKDADERVEKIQIQLDEAQTLLKKKER
DFEETMDALQADIDQLESEKAELKQRVSSQAKMGLEGRGGAASGVASIVTGIAGEEQKAT
MMSGVGAGSGLQVVDSPLLTQQIEAQRLCIKHLKNENNRLKAEKMRAQLASLPPLHVPKL
PSRQEGHPEVLSSALYRKADQLLETLLQMSANVKVVDVTGRSPVTPSAQLLEQTARLQSL
SDTLARLKDEVAEHIVNQQRGARASSDFATFPSTLFVKAKEEKQADAVLVGRVMVPCPRG
QEQVHRLVLPQRQLQRIHSLLRS
NT seq 3852 nt   +upstreamnt  +downstreamnt
atgatgtcacagtcgaggaggaacgtgcacccccggaccggcagcagcaggatgagctca
gacgggggcggccggcccgtcaaagtgggctccccggtggaggtgatcggcaaggggcag
cgcggcgccgtggccttcatcggcaacaccctcttcgcctccgggaagtgggtgggagtg
atcctggacgaggccaagggcaagaacgacggcaccgtgcagggcaagcgctacttcacc
tgcgaggagaaccacgggatatttgtgcgacagtcgcagatccagctggtcgacgatgga
gcagacacgacctccccagagacccctgagccgggcgctggcaaggctctcaaacgagag
atcctggagtcgtccaagacgaccaaactgcagcgaggaatgaagcccaaaaaggtggcg
catgtttctctgacgcctgcacctcgaaagaccacggccagaaggcccaagcagccaggt
cgtcctgcagcctccggtgggaagggcgccgcctctggctcggcctcggcctcggccggg
gagatgagcagcagcgagcccagcacgccggctcagacccctctggccgctcccgtcatc
ccaaccctgcactcgccaggaaaccctccgccgccgccccccagcaaggaggacgtcacc
atggcaacacaggaggaggaggccctccgcggacaggtgaaggacctggaggagaagctg
gagacgctgaagatgaagcggacagaggacaaggccaaactgaaggagctggagaagcac
aagatccagctggagcagctgcaggagtggaagaccaagatgcaggagcagcaggcagag
cttcagaaacatctgaaagaggccaagagggaggccaaggaggccatggaggcgaaggaa
cgttacatggaggagatgtcagacacagcagacgcaatagaaatggccacgctagacaag
gagatggctgaggagcgggccgagtctctgcagctggaggtcgactccctcaaggagaga
gtggacgagctcaccatggacctggagatcctcaagcacgagatcgaggagaaaggttca
gatggtgctgcctccagttaccaggtgaagcagctggaggagcagaacgccagactgaag
gaagcgctggtcaggatgcgtgatctgtcggcgtcagagaagcaggaacacgtgaagctg
cagaagcagatggagaagaagaacatggagctggacactcagaggagccagaaggagaaa
ctgcaggaagagatggcggctgcagaaaagaccatcgacgaactgaaagagcaggtggac
gcagccttgggggcagaggagatggtggagatgctgacagagaggaacctggacctggag
gagaaagtccgggagctgagggagacggtcaccgacctggaagcgataaacgagatgaac
gatgagctgcaggagaacgccagagagacggaactggagctgagggagatgttggatctg
ggcgctgccagagtccgagaggcggagaaacgggtggaggcgtcgcaggagaccgtggcc
gattaccagcagaccatcaagaaataccgcgagctcacggctcacctgcaggaggtgaac
agagagctgaccagtcagcaggaagcgtccgcagagctgcagcagcagccgccagcggag
atgtttgatttcaagatcaagttcgccgagacgaaggcctacgccaaggccatcgagatg
gagctgaggaagatggaggtgggtcaggccaacaggcacgtgtcccttctgacctccttc
atgccggagtccttccttcgccacggcggcgatcacgactgcatcctggtgctgctgctc
atccccagactcatttgcaaggccgagctgatcggcaaacaggctcaggagaagtttgac
ctgcatgagaactgtgtggagcgggcggggctgcggggagctgctggcgagcagctgagc
ttcgccgggggtttggtctactctctgagtctgctgcaggccacgctccacagataccag
caggctctgacccagtgcagcgtggaggtctacaagaagatcggcgctctgtatcccgag
atgagcgtccacgagcgttccctggatttcctcatcgacctgctgcacaaagaccagctg
gacgagaccgtcaacgtggagccgctgaccaaggctattaaatactatcagcacctctac
agcatccacctggcagagcagcctgaggactgcaccgtgcagctggccgatcacatcaga
tttacccagagtgccctggactgcatggcggtggaggtggggcggctccgggccttcctg
cacgtgggtcaggagaaggccgacctcgccgtgctgctgaaagacctggagacgtcctgc
agcgacatccgacagttctgcaagaagatccgcaggaggatgcccggaactgatgctcca
ggcatcccagcagcactcagctttggacagcaggtgtccgacaccctctccgagtgcagg
aaacacctcacctgggtggtggccgtcctgcaggaggtgggggcagccggcgctcagatg
atgtcacctctgggtgaacaggaggggctggcagctggcaaaatggaggatgtggctttt
aaggctggagagcagatctatggatcccagggcgccaacccctacgattgcctgcgtcag
tcctgcagtatcgtcatagcaaccatgaacaagatggccactgccatgcaggagggagag
tacgactccgagaagcctcaaaataagaaccctccacccgtggaagtacgagcggcggct
ctccgggcggaaatcacagatgctgaaggtctcggcctgaagctggaggacagagagacg
gtcatcaaagagctgaagaagtcgctcaagatcaagggggaagagctgagcgaggccaac
gtgcgcctcagcctgctggagaagaagctggacagttcgtccaaagacgcagacgaacga
gtggagaagatccagattcagctggacgaggctcagactctgctgaagaagaaagagagg
gacttcgaggagaccatggacgctctgcaggccgacatcgaccagctggagtctgagaag
gccgagctgaagcagcgggtcagcagccaggcgaagatgggcctcgagggccgaggaggc
gccgcgtctggagtcgcttccatcgtgacgggaatagcaggagaggaacaaaaagcaacc
atgatgtccggcgttggcgctggttcaggcctccaggtggttgattcgccgctgctgact
cagcagattgaggctcagagactctgcatcaagcacctgaagaatgaaaacaacagactg
aaggctgagaagatgcgcgctcagctcgcctccctgcctcccctgcacgtgcccaagctc
ccctccaggcaggagggccaccctgaagtgctctccagcgccctctaccgcaaggccgac
cagctcttggaaacacttctgcagatgagcgccaacgtcaaggtggtggacgtcaccggg
aggtctccagtgacacctagtgcccagctgctggaacagacggctcggctgcagtcgctg
agcgacaccctggccaggttaaaggacgaggttgcagagcacatcgtgaaccagcagcgt
ggcgctcgagcctcctcagatttcgccaccttcccctcgaccttgttcgttaaggcgaag
gaggagaagcaggccgacgcggtgctggtggggcgagtcatggtgccgtgtcctcgcggt
caggagcaggtccaccgcctggttctgccgcagcgccagctgcagaggatccacagtctg
ctccggagctaa

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