Takifugu flavidus (sansaifugu): 130513404
Help
Entry
130513404 CDS
T09160
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4-like isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130513404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tfs02000
]
130513404
Transporters [BR:
tfs02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130513404
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
130513404
NCBI-ProteinID:
XP_056868090
LinkDB
All DBs
Position
17:11071278..11092776
Genome browser
AA seq
2317 aa
AA seq
DB search
MGSGQQVSLLLWKNWTIRRRQRGRFFMEIMWPVLLFMGLVWLRRVNPLYRQHECHFPNKA
MPSTGVLPWLQGIFCNANNPCFQYSTRGESPGLVSNYNNSILSKLYWDVQELLLSDPEFQ
HVGRLWKELNSMSNFMDTLRTRPEMVSGRGVKVEAILKDDETLTSFLLRDVPLTQSVVNQ
LVNAQIRPEQFAFGVPHLHLKDIACSLNLLERFLIFPSSRGLYAVRNAMCILTPQRLQII
EDKFYANVDFFKLFRLLPLVLDNHSEGIDIRFWVKVISATSDKLEELYQRNSSKEFLQVV
APLFQSNLTFWQLMAAASSLVCGYTEGAFSRVASFNWYEDNNYKAFLGISSETGRSRYSY
DNSTTLFCNDLMEGLELNPATRIMWKSVKPLLMGQILYAPDSPAVRQIIKNANTTFEELE
RLRTMGKAWEEVAPQIWAFFQNGIQVKMIRDTIQNPSVMDFIDRTLEETPFSSKHILNFL
HNGPSEDRLPDMPDFDWRDIFNLTDQVIRMLNQYGECVILDKFVALPDEDMVTHHALDLL
EDSKFWAGLIFVNMYPWTTAVPPHVKFKIRMDIDAVERTNKVKDRYWDPGPRADPMDDLR
YVWGGFAYLQDIIEHGIIKTQTGKEWPLGVYLQQMPYPCYVDDLFMLTLNRCFPIFMVLA
WVYSVSMIVKSIVLEKELRLKETLKATGVTNGVIWSTWFIDCFLMMGTSTALLTVIIMGG
RVLNYSNAVILFLFLLTFTMATIMQCFLLSVFFNQANLAAACCGIVYFTLYLPHIFCFAW
QDRITKDMKILASLLSQVAFGFGTEYLSRYEEQGLGLQWDNIQTSPLEGDEFSFLTSIIM
MGLDTILYAVLAWYLDNVFPGQYGIGRPFYFPLLPCFWFNRVAPALGNNKLEKSSNGFSK
LAKREQGQTPIKQDQEKTRTSEEMASCEHQNERDGQEKENQAEAEETAQSFFEAEPVDLV
KGVCIQNLVKVFGGSSKPAVDGLSINFYENQITAFLGHNGAGKTTTMSILTGIFPPSSGT
ATIYGKDICTDMDSIRLSLGMCPQHNILFQHMTVAEHILFYSLLKGRPTAEAEEEVENML
QDLGFPHKRDELIQNLSGGMQRKLSVALAFVGGAKVVILDEPTSGVDPYSRRSIWDLLLK
YRAGRTVILSTHHMDEADLLSDRVAIISQGRLHCCGSPIFLKNCFGAGFYLTLVRRIKHE
IPKTSCDHTDECSCKCSKCSKFKSSQESQTADRQLDGNLENITALIHHHVPQARLIEAIG
QELTYLLPSRNFQPRAYASLFRELEETLVDIGLSSFGVSDTSLEEIFLKVTADGNATNRK
CDQDKKSLQQISRNSLSWLNRVAIDMDPPKESDGAVHNNGQGLCNNMDGSTGRGSYQVRG
LRLIFKQFFALLVKRLHHTTRSYKDFVAQIVLPASFVFLALTFTLIVPPFGEYPSLTLSP
WMYGRQYTFFSNEHPSDAQMRYFGEVLLNKPGFGTRCMVEEPLENFPCNNITTEWEMPLV
NPELIDMLADQEWNSLRPSPDCQCSTPRKLTMLPVCPEGAGGLPPPQRIQSTGDVLMDLT
GRNISDYLVKTYPSLIRTSLKSKYWVNEQRYGGISVGGQLPVLELQPQTIKDVATQMGRL
FNVTGGKHSRKTLEDIETFLRYMETQNNVKVWYNNKGWHAMASFMNVANNAILRAHLPKG
ANLAEYGITVINHPLNLTKKQLSEITVLTTSVDAVVAICVIFAMSFIPASFVLYLIQERV
TQAKHLQFVSGVSPLVYWMANFLWDMVNYSIGVAMVVEIFIFFDKKCYTSAANLQPLIAL
LMLYGWSVTPMMYPMSYLFSIPSTAYVSLSCINLFIGLNSSALTFILDLFENTTALHKLN
QLLKTVLLIFPHYCLGRGLIDMAMNQAVTDIYAHFGEDYRLDPYNWNFIGKNLFCMTIEG
FLYFILTILFQYRFFLDHWVSDCPKPPVLDEDADVAGERARICKNERTNDILQIRDLSKT
YKGTIIPAVNRICLGVSSGECFGLLGVNGAGKTTTIKMLTGDIDVTTGEASVAGHCVLTN
ILDVHQNMGYCPQFDAIDELLTGREHLHLYARLRGVPEAEISRVAEWAIQKLGLSQDANQ
SAGTYSGGNRRKLSTAIAMIGCPVLVLLDEPTTGMDPLSRRFLWNSIMSVIQDRRAVVLT
SHSMEECEALCTRLAIMVNGSFKCLGTIQHLKYKFGDGYMLTMKIRAAKPNCAPDLNPAE
AFMESTFPGCIQREKHYNTLQYKISSSSLARIFQMVLANKDKLNIEDYSVSQTTLDQVFV
NFAKQQSREDDTIVLHPKAAGAQAYIHTNTSTKSLIK
NT seq
6954 nt
NT seq
+upstream
nt +downstream
nt
atggggtcagggcaacaggtcagcctcctgctgtggaagaactggaccatccgcaggaga
cagcggggtcgtttcttcatggagatcatgtggcccgttctgctgttcatgggactggtg
tggctgcggagggtcaaccctctgtaccgccagcacgaatgccacttccctaacaaggcc
atgccctccactggcgtcctaccttggctccaaggaatcttctgcaatgccaacaaccct
tgttttcaatactccacccgtggagaatctcccggtcttgtgtccaactacaacaactcc
attttgtctaagttatactgggatgtccaagagcttcttctgagtgacccagagtttcag
catgtcggtcgtctctggaaggagctgaactccatgagcaacttcatggacaccctgcgc
acccgccctgaaatggtctcaggccggggagtgaaggtggaggccatcttaaaggacgat
gagactctgacatcattcctgctgagagacgttcctctgacacagtcggtggtgaatcag
ctagtcaatgctcagatcaggcctgaacagtttgcctttggggttccacatcttcatctg
aaggacattgcctgcagtctgaacctgctggagcggtttctcatcttccccagcagccga
ggactctacgccgttcgcaacgccatgtgcatcttaacgccgcagcggctgcagatcatc
gaagacaaattctacgccaatgtggattttttcaagcttttccggctgcttcctcttgtt
ctggacaatcactcagaaggcattgacattcgcttctgggtaaaggtcatttctgccacc
tcagacaaactggaagagttgtaccagaggaacagctccaaagagttcctccaggtggtg
gctcccctcttccagagcaatctgaccttctggcagctgatggctgctgcctccagcctg
gtgtgtggttacaccgaaggcgctttctcccgcgtggcctcctttaactggtatgaggac
aataactacaaagccttcctgggcatcagcagtgaaacggggcggagccgctacagctat
gacaacagcacaactttgttttgcaatgatctgatggaggggctggagttaaaccctgcc
acaagaatcatgtggaaatctgtgaagcccctgctgatgggacagatcctctatgccccc
gactcacctgctgtcagacagatcatcaaaaatgcaaataccacatttgaagagctggag
aggctgagaacgatggggaaggcctgggaggaagtagcaccccaaatctgggcatttttc
caaaatggaattcaagtcaagatgatccgggacactatccaaaatccatcggtgatggat
ttcattgacaggacactagaagagacacctttctcctctaagcacatcctaaacttcctg
cataatggcccatcagaggaccgtctacctgacatgccggattttgattggcgagatatc
ttcaatctcactgaccaggtcattcggatgctaaaccagtatggggagtgtgtgattctg
gataaatttgtggctctgcccgatgaggacatggtaactcatcatgccttggacctgttg
gaggacagcaagttctgggcaggccttatatttgtaaacatgtacccttggacaaccgca
gtgccgccacatgtcaagttcaaaattcgtatggacattgatgcagtggagcgcaccaat
aaggtcaaagacagatattgggaccccggccctagagctgatccaatggatgacctccgc
tatgtttggggcggctttgcgtatctacaggacataatcgagcacgggatcatcaagact
cagacaggaaaggaatggccactgggggtatatttacaacagatgccgtacccttgttac
gtggatgatctattcatgctaacattaaaccgctgtttccccatcttcatggttctggcc
tgggtctactctgtgtccatgatagttaagagtattgtccttgagaaggagctacgcctg
aaggagacccttaaggccactggggtcaccaatggcgtcatctggtctacctggttcatt
gactgcttcctcatgatgggcacaagcactgctctccttactgtcatcatcatgggagga
agagtgctgaactacagcaatgctgtcatcctctttctctttttgctgaccttcaccatg
gctaccatcatgcaatgcttcctcctgagcgtcttcttcaaccaggccaacttggctgcg
gcctgctgcggcattgtttacttcaccctttacctcccacacatcttctgctttgcatgg
caagaccgtatcaccaaggacatgaagatcctggcaagtctcctctcacaagtggctttt
gggttcgggactgagtatctttcacgatatgaagagcagggtctgggtctacagtgggac
aacatccagaccagtcctctagaaggggatgaattttcttttctcacctccattatcatg
atggggctggacaccatattgtacgctgtactggcctggtacttggacaatgtcttccct
ggacagtatggaattggtcggccattttattttcctctccttccctgtttttggttcaac
agggttgctccagccttaggcaacaacaaactggaaaagagttcaaatggttttagtaaa
ttggcaaagcgagaacaagggcagacgccaataaaacaggaccaggagaaaaccagaacg
tccgaagagatggcatcgtgtgaacaccagaatgaacgtgacgggcaggagaaggagaac
caggctgaagctgaggaaaccgctcagtcattctttgaagcagagccagtcgacctggtg
aagggtgtctgcatccagaacctggtcaaagtgtttggcggcagctccaaaccagctgtg
gacggcctcagcatcaacttttatgaaaaccagataacggcttttcttggtcataacggg
gctgggaagaccaccaccatgtccatcctgactggtattttccctcccagttcagggaca
gccaccatctatggcaaagacatctgcactgacatggacagcattcgcctatctctggga
atgtgtcctcaacacaacattctctttcagcatatgactgttgccgagcatattctcttc
tactcactgttaaaaggccgcccaacagcggaggctgaagaggaggtggagaacatgctg
caggatttgggctttccacacaagagagatgaactaatccagaatctctcagggggcatg
cagaggaaactgtcagttgccttagcatttgttggtggggctaaagtggtgattctggat
gagcctacttcaggagtggacccgtactccaggcgctcaatctgggacctgctgctgaaa
tatcgtgcagggcggacagtcattctgtccacccaccacatggatgaggcagacttgctg
agcgacagggtggccatcatctctcaaggacgcctccactgttgcggttcccccatcttc
ctcaagaactgctttggtgctggattttatctgacccttgtacgacgaattaaacatgaa
atcccaaagaccagctgtgaccacacggatgagtgctcctgtaaatgttccaaatgttcc
aaatttaaatcaagccaggagagtcagactgcagacagacagctggatggtaacctggag
aacatcacagctctgatccatcatcatgtgccacaggctcgcctcatagaagctattggt
caggagttgacctatttgctccccagccgcaacttccagcccagagcgtacgccagcctc
tttagggaactggaggagaccctggtggacatcggtctcagcagttttggtgtgtcagac
acgtcactggaggagatctttctaaaggtcactgctgatgggaatgcaaccaacaggaaa
tgtgatcaagacaagaaatcattgcaacagatttctcgtaatagtctctcttggttgaac
agagttgcaatagacatggatccaccaaaagagtctgatggggctgtgcacaacaatggc
cagggcctgtgtaacaacatggatggtagtactggccggggatcctaccaggtcaggggc
ctgcgtctgatctttaaacagttctttgctctattggtcaaaaggttgcatcatacaacg
cggtcctacaaagacttcgttgcccagattgtgttgccggctagctttgtttttcttgct
ctgacgttcactctgattgttccaccatttggagagtatccaagtctgaccctcagtccc
tggatgtatgggagacagtacacgttcttcagtaatgagcatccctcagatgctcagatg
agatactttggtgaagtgttgttgaacaagcctggttttgggactcgctgcatggtggag
gaacctctagaaaatttcccttgtaacaacatcaccactgagtgggaaatgcccctggtc
aaccctgagctgatagacatgctggctgaccaagagtggaattccctccgaccatctcct
gactgtcagtgcagcacacccaggaagctcactatgctgcctgtatgtcctgagggagct
ggaggcctgccgcctccacagagaatacaatcaactggagatgttctaatggatctaacg
ggcaggaacatctcagactacttggtgaagacttacccaagcctcatcagaaccagcttg
aagagcaaatattgggtgaatgagcaaagatatggaggtatatcagtgggggggcagctt
ccagttttagagctgcagcctcagaccatcaaggatgttgccacccagatggggcgattg
ttcaacgtcactggaggcaaacactccagaaaaaccctggaggacatagagactttcctc
aggtacatggagactcaaaacaatgtgaaggtgtggtacaacaataagggctggcatgcc
atggcgtctttcatgaatgtggctaataatgccattcttcgtgcacacctgcccaaaggt
gccaacctggctgaatatggaatcactgtgatcaaccatcccctgaacctcaccaaaaaa
cagctctctgagatcactgtcctcactacctcagtggacgcagtggtggccatctgtgtc
atctttgcaatgtccttcattccagccagttttgtcctttatttgatccaggagagggtc
acacaggcaaagcatctgcagtttgtcagtggtgtcagccctttggtctactggatggcc
aacttcctctgggacatggtgaattactccatcggtgttgcaatggtggtggaaattttc
attttctttgataagaaatgctatacttcagcggccaacctgcaaccattaattgccttg
ctcatgctttatggctggtctgtgacccccatgatgtaccccatgtcatatttattcagc
attcccagcacagcatatgtctctttgtcttgcatcaacctcttcattggcctgaacagc
agtgccctcacttttatcctggacctttttgagaacaccacagctctacacaaactcaat
cagctcctaaagactgtgctgctcatcttcccccattactgcctgggtagaggcctcata
gatatggctatgaaccaggctgtgactgatatctatgcccactttggtgaagactacagg
ctcgatccttacaactggaatttcattggaaagaatctattctgcatgaccattgaagga
tttctctattttattcttactattctcttccagtatcgatttttcttggatcactgggtg
tctgattgtccaaagccccctgttttggacgaagatgcagatgtggcaggagagagagct
cgaatctgtaagaatgaaagaacaaatgacattcttcaaattcgagatctgtcaaagact
tacaaaggaacaatcattcctgcagtcaaccgaatctgtcttggagtttcttccggagag
tgctttggtcttttgggagttaatggtgcagggaagaccaccacaatcaagatgttgact
ggagatattgatgtcaccacaggagaagcctcagttgctggtcattgtgttttgaccaac
atattggatgtgcaccaaaacatgggatactgcccacagtttgatgccattgatgagctg
ctgactggtagagaacacttgcacctctatgctcgccttcggggagttccagaagctgag
atcagcagggttgcagagtgggccatccagaagctgggtctttctcaagatgcaaatcag
agtgctgggacctacagtggaggcaatagaagaaagctctccacagccatcgccatgatt
ggttgccctgttctggtgctgctggatgagcccactacgggcatggaccctctctccaga
cgcttcctgtggaactccatcatgagtgttattcaggacagacgagctgtagtcctgacc
tcacacagcatggaggaatgtgaagcgctgtgcacccgcttagccataatggttaatgga
tcattcaagtgtttgggaacaatccaacacctcaaatacaagtttggggatggatacatg
ttgactatgaagatcagggcagctaagcccaactgcgccccagacttgaatcctgctgaa
gcattcatggagagcacctttcctggctgcatccagagagaaaaacactacaacaccctg
cagtacaagatctcttcctcctccttggcaaggatctttcaaatggttcttgctaacaaa
gataagctcaacatagaggactactctgtgtcgcagaccactctcgatcaggtttttgtt
aactttgccaagcaacagtcaagagaggatgacacaattgttttacacccaaaagctgct
ggagctcaagcatatatacatactaacacatcaaccaagagtttgatcaagtga
DBGET
integrated database retrieval system
