Takifugu flavidus (sansaifugu): 130513655
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Entry
130513655 CDS
T09160
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X1
KO
K24495
myomesin
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130513655 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
130513655 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130513655 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
Pur_ac_phosph_N
V-set
Ig_CD22
C2-set_3
MAJIN
Motif
Other DBs
NCBI-GeneID:
130513655
NCBI-ProteinID:
XP_056868524
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All DBs
Position
17:4155376..4172732
Genome browser
AA seq
1606 aa
AA seq
DB search
MSGSIPFYQRHHRHYDRSYRSRETDAKLEQYQSSSRYAANHSSSFGSGGRGLSSHSGLEV
GRLSPASKRVKPTYLAVDKENQIIGYVVPLFRGSHEFGAGYLDTEESSASRCAAYASRSG
VFNSGLETERSELISRKEAVRRSAEHISLNKRIHEHEEHFKRMNTDSLMHSPEFVIKPRS
HTVWEKQCVRLHCTVSGWPDPRVVWYKNNVTIDPLANPGKYKIDSSYNIHSLEINKCDFE
DTAQYRVSAMNSKGELSAFASVVVKRFKGEVDEFLPAPRRARRQDGPVSEYGITFQTHIV
DKFGVSFGREGETMSLGCTVVIYPVLQGYQPGIQWYRDDVLLSPSKWQHMHWSGDRATLT
LSHLNKEDEGLYTLRVTTKSGYETYSAYVFVRDADAEVEGAPGSPLDVRCLDANKDYIIV
TWKQPAVDGGNSILGYFVDRCEVGTNHWIQCNDTPVKFARFPVTGLVEGRSYLFRVRAVN
NSGMSHPSRVSEPVAAMDPADRARMRGTSAPWTGQIIVTEEEPAEGIVPGRPLELQVTEA
TKNYVVLSWKPPAGKGLEGVMYYVEKCVSGTDSWQRVNTEIPVKSPRFALFDLAEGKSYS
FRVRCCNSAGVGEPSDPTEATTVGDKLDIPSAPGRVVPTRNTDTSVVVSWEASRDARELV
GYYIEGSIVGSQVWEPCNNKPVNGTRFICHGLTTGEKYVFRVRALNAAGLSQFSPESEPV
EVKAAIGGGIPHASPTPPYGITVLESVRDSMVLAWKQPTSIGGADVTGYFVDYREVVDGL
PGKWHEANVRAISERAYRVTDLKENRKYQFQVRAANIAGVGVPSLPSDTFLCEEWTIAVP
GPPHDLQIREVRSDSLVLLWKPPVYQGRDPINGFYVDMKEADAPEEAWRGVNNKATEKMF
LKIKNLKEAETFVFRVRAQNKAGVGKSSEATEPVSAVTKPGTKDFVVDVDDDGVVSLNFE
CCDLTPDSKFVWSKNYEDITDSSRLVVETKGNKSKAVFSGLGEEDVGIYSCFVTHTDGAS
SSFTLSEEELKRLQKLSHDHKFPIIPLKSDLAVELLEKGKVRFWLQADKISANGKVDYVF
NESSLSQGEKYKMNFDKNTGVIEMIMESLTPADEGTFTFQLQDGKATNQSSLVLIGDVFK
ELQKESEFQRKEWFRKQGPHFIEYLGYEVTPECCVVLKCKVGNIKKETSALWYKDGQEIK
ADEHLSFTEGVLKLEIAQRASPADTADYADHVIWRRLKISKKDAGVYEVVLKDDRGKDTS
TLNLKDQGFKDLMNEVFSFIANSSTPLKITSTDQGIRLYTFVSYYNDLLQVTWQYKNSAI
AFSDRIKSGVVGEQIFLQITEPTEKDMGEYAIDFYDGKGGVRRTVELTGQAFEDAYAEFQ
RLKAAAIAERGRARVAGGLPDVVTIQEGKALSLTCNISGDPVPEVTWLKNDKEITTDGHI
ILKFESGKFANFFVTGVNTSDSGKYSILVKNKYGTESGDFTLEVSEGTPDMGVTSYWTDA
EGNVVFGPNTPKEKMKTPGSSSKSQKQKDSATRALPQDVQKNEEKIAAAAAAEPKTPDSA
QKDDLKQKDVDQLLTFDPSKPPKQPAEASEEAETLKETESIAAGGK
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatccatacccttctaccagaggcaccatcgccactacgaccgtagttaccgt
agcagggagacggacgccaaactggagcagtaccagtccagcagcaggtacgctgctaac
cacagcagcagctttggcagcgggggcagaggactgtcttctcattctgggctggaggtg
ggcagactcagcccggcgtcaaagagagtcaagccaacttacttggctgtggacaaagag
aaccaaatcatcggctatgtagtgcctctcttcaggggcagccatgagtttggagcggga
tatttggacacggaggaatcgagcgcgagccgctgtgctgcgtacgcgtctcgcagcggc
gtgttcaacagcggcctggagacggagaggtcagagctgatctccaggaaggaggccgtg
cgccggtccgctgaacacatctctctgaacaaaaggatccatgaacacgaggaacacttt
aagcgcatgaacactgacagcctgatgcactccccagagtttgtgataaaaccccgctcc
cacaccgtgtgggagaaacagtgcgtgcgcctgcactgcaccgtcagcggctggcctgac
ccacgggtcgtctggtacaaaaacaatgtgacaatcgaccctcttgccaatcctggcaag
tataaaattgacagcagctacaacatccactcgctggagatcaacaagtgtgattttgag
gatacggcgcagtatcgcgtctctgctatgaactcaaagggagagctgtctgcatttgcc
tctgtcgttgttaaaaggttcaaaggtgaagtcgatgagttcctgccagcacccagacga
gcccgtcgtcaagatgggcccgtgtctgagtatggcatcactttccagactcacatcgtc
gataagtttggtgtatcgtttggaagagaaggtgagaccatgagtctgggctgcacggtc
gtcatttacccggtgctgcaaggctaccagcccgggatccagtggtaccgcgacgatgtt
ctgttgtctccctccaaatggcaacacatgcactggagtggagacagagccacgctgacg
ctcagccacctcaacaaagaggacgaaggcctctacaccctgcgggtcaccaccaagtct
ggatacgagacctactcagcttacgtctttgtcagagatgccgatgctgaggttgaggga
gctccgggctccccgctagacgtgcgctgtctggatgccaacaaggattacattatcgtc
acctggaagcagccagccgtcgatggtggaaactcgattttgggatattttgtggaccga
tgtgaggttggaaccaaccactggatccagtgcaatgacacgccggtgaagtttgctcgt
ttccccgttaccggcctggtggagggtcgttcctacctcttccgtgtgcgcgcggtaaac
aacagcggcatgagccacccgtccagagtgtccgagccagtggctgccatggacccggct
gaccgtgcacggatgagaggtacctctgctccctggactggacaaatcattgtcacagag
gaggagcctgcagagggtattgttcctggtcgacctcttgagctacaggtgacggaggca
accaagaactacgtggtcctgagctggaagccgcctgcggggaaaggccttgagggcgtc
atgtactatgttgagaagtgtgtctcaggcacagacagctggcagagggtgaacacagag
atccccgttaagtctccacgatttgcactcttcgatctcgccgaggggaagtcctacagc
ttccgcgtccgctgctgcaactccgccggtgtcggcgagccgtcagaccccaccgaagcc
accactgttggcgacaagcttgatatcccatcagccccagggagagtggtccccaccaga
aacacggatacgtccgtggttgtgtcctgggaggcctcccgtgatgccagagagttggtc
ggctactacattgagggcagcatcgtgggcagccaggtgtgggagccatgcaacaacaaa
cccgtaaatggcaccaggttcatctgccacggactgacgacaggagagaaatacgtgttc
agggtgagggcattgaacgcagcagggctcagccagttctccccggagtctgagccggtg
gaggtgaaggctgctattgggggcggcatccctcacgcatcccctactccaccctacggc
atcaccgtgctggagagcgtgcgcgactctatggtgctggcctggaaacagccgacctcg
atcggcggcgccgatgtcaccggctactttgtggattaccgtgaggtggttgacggcctg
ccaggaaagtggcacgaggcaaacgtacgagctatcagcgagagggcctacagggttact
gacctgaaagagaacaggaagtaccagttccaggtgagggcagccaacattgccggggtt
ggtgtcccgtctctgcccagtgacaccttcctgtgtgaggagtggaccatcgccgtgcca
ggtcctccccatgacctgcaaataagagaggtgcggagcgactccctggtgttactgtgg
aaacccccagtgtaccagggccgcgaccccatcaacgggttctacgtggacatgaaagag
gcggacgcaccagaggaggcgtggaggggagtcaacaacaaggccacggagaagatgttc
ctcaagattaagaatctgaaggaggcagagacgttcgtgttccgcgtgcgcgcccaaaac
aaagccggtgtcggcaaaagctccgaggccacagagccggtatcagcagtgaccaagcca
ggcactaaggacttcgttgtggacgtcgacgacgatggcgttgtctcgctgaactttgaa
tgctgcgatttgacccccgactccaagtttgtgtggtccaagaactacgaggacataaca
gactcgtcccgcctggttgtagagaccaaagggaacaagtccaaagcagttttcagtggt
ctcggggaggaggacgttggcatttattcctgttttgtcacccacactgacggagcttct
tccagcttcaccctgtctgaggaagagttgaagaggctgcagaagctcagtcacgaccac
aaatttcccattattccgctgaagtcagatttggcagtggagctgctggagaagggcaaa
gttcgcttctggctgcaggctgacaagatttcagctaacggcaaagtggattacgtgttc
aatgaaagctctctctctcagggggagaaatacaagatgaactttgacaagaacaccggt
gttattgagatgattatggagtccctgactccagcagatgagggcacctttaccttccag
ttgcaagatgggaaagccaccaaccagtccagtttagttctgataggagatgttttcaag
gagctgcagaaggaatcagagttccagaggaaagaatggttcaggaagcagggtccacat
tttatcgaatatctgggatatgaggtgacaccagagtgttgcgttgtgctaaaatgcaag
gtagggaatattaagaaggaaacctcggcactgtggtacaaagatggtcaagaaatcaaa
gcggacgaacacctcagcttcaccgagggggtgctgaaactggaaattgctcagcgcgcc
tccccggcagacacagcagactatgccgaccacgtaatctggagaagactaaaaatttcc
aagaaggacgctggtgtttatgaggtcgttctgaaggacgacagaggaaaggacacgtcc
acgttgaatttgaaagatcaaggcttcaaagacttgatgaacgaggtcttcagttttatc
gctaactcctccacgccgctgaagatcaccagcacagaccagggcatcaggctctacacg
tttgtcagttactacaacgacctgctgcaggtcacgtggcagtacaagaactcggccatc
gccttctccgaccgcatcaagagcggcgtggtgggggagcagatattcctgcagatcaca
gagcccacggagaaggacatgggagagtacgccatcgacttctacgacgggaagggtggg
gtgaggaggaccgtcgagctgaccggacaagcttttgaagacgcttatgcagaattccag
agactcaaagctgctgccatcgcagaaagaggtcgcgcgcgtgtggcagggggtctgcca
gacgtggtcaccatacaggaggggaaggctctcagtctcacgtgcaacatctcgggtgac
cctgtgccggaggtcacctggctgaagaacgacaaggagatcacgacggacgggcacatc
atcctcaagttcgagtcgggcaagttcgccaacttcttcgtcaccggcgtgaacacgtcg
gacagcggcaagtacagcatcctggtgaagaacaagtacggcacagagagcggggacttc
accctggaggtctcagagggaacaccggacatgggggtgacttcatattggaccgatgca
gaaggaaatgtggtgtttggtccaaacaccccgaaagaaaagatgaaaactccaggctct
agttccaaatcacagaagcagaaagattctgcaacaagggctcttccacaagacgtgcag
aaaaatgaggagaagattgctgctgctgctgctgcggagccaaaaaccccagattctgct
caaaaagatgatttaaaacagaaggatgttgaccagctgttaacttttgacccatcaaag
cctcccaagcagcctgcagaagcatcagaggaagctgaaacacttaaggaaacagaaagt
attgctgcaggaggcaaatag
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