Takifugu flavidus (sansaifugu): 130513689
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Entry
130513689 CDS
T09160
Symbol
drosha
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130513689 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130513689 (drosha)
03009 Ribosome biogenesis [BR:
tfs03009
]
130513689 (drosha)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130513689 (drosha)
Enzymes [BR:
tfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
130513689 (drosha)
Messenger RNA biogenesis [BR:
tfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
130513689 (drosha)
Ribosome biogenesis [BR:
tfs03009
]
Eukaryotic type
90S particles
RNase
130513689 (drosha)
Prokaryotic type
rRNA processing factors
130513689 (drosha)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
130513689 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
RM44_endonuclase
dsrm
Cdc13_OB2
Cro
Motif
Other DBs
NCBI-GeneID:
130513689
NCBI-ProteinID:
XP_056868585
LinkDB
All DBs
Position
17:1724182..1774858
Genome browser
AA seq
1313 aa
AA seq
DB search
MSFHQDRGAHRAGQHGSPQNYRPANLRPPPPQPPVPLYHYDPQVPPSSSYHSNSGYMHPH
SNFMQYPPPAHSQTPGALNQCPVRPPFPKPPGRQGFPDPPPHFPPPPLPSSTGGPPPPQV
SSQNTYQPYMLPPVPPPPITHPGMPPPIHSPSMNYHPQYSMNSPHPPHPPFPPPTFSAGH
AQSTFVPDHSFRHGGQYKHDRPADKRRSPERGYRHDDQRQKSYSYGSHGDKHKMEFFGDR
KDRGRSPDRRWRTEGGRHRSEYDRGRTPPRHRSRDRSRERYRHRDSRRSQSPDRHRKRPR
SRSSSRDRKRSRWEDERERRSESSSTLSRERSYVSTRNRDSEEPFSEGERSSFSARSRDS
EQAFPEHDREREKGDEEKEEEELLKPAWVRCTHAESYYSNDPMDQVGDSTVVGTSKLRDL
YERFEEELGRRQERAKAARPKWEPPKTKLDEDPGDSSSESECESDADGSSCSSSSDSDVF
DVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEESVKQCR
AMNNNAGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFSHTPLTNIPLCRVIR
FNIDYTIHFIEEMTPENYCVRGLELFSSYLFQDVLELYDWNLTGPEFDNDSPGCPQFHFL
PRFVRFLPDGGKEVLSMHQVLLYLLRSSKPLVPEEEIADMLQWEELEWQKYAEECKGMIV
TNPGMKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRH
LLANSPKVKQMDKQKLMQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMM
LPVLTHHIRYHQCLMHLDQLIGYVFTERCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGI
RQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAVVEFLTSV
HLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMAN
CFEALIGAVYLEGGLEEARQLFGRLLFNSESLREVWLNYPPHPLQVQEPQTDRQLIETSP
VLQKLTQFESSIGVLFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYL
FIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVVLRTKTLADLLE
SFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIP
LYKTLQTVGPSHARTYTVAVYFKGDRIGCGKARGEVRTPSLAAPPPEGNQSIA
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccatcaggatcggggagcacacagagcgggacaacatgggtcccctcagaac
tacagacccgccaacctgagaccacctccaccacagcctcctgtccccctgtaccactat
gatccacaagtacctcccagttcaagttaccatagcaacagcggatacatgcaccctcac
tcgaacttcatgcagtaccccccaccagcgcattctcagactcctggtgctctgaaccag
tgcccggtccgcccaccgtttcccaagcctccgggcagacagggattccctgatcccccg
ccacactttccaccccctcctctgcccagctccacaggaggccccccaccgccccaggtt
tcttctcagaacacctaccagccgtacatgttgccacctgtacctccgccacctataacg
cacccgggcatgcctcctcccatacactctccatccatgaattaccacccacagtactct
atgaactccccccatccacctcaccctccttttccacccccaactttcagtgctggtcat
gctcagagcacctttgttcctgaccacagcttcaggcacggggggcagtacaaacacgat
aggcccgcagacaaaaggaggtcgcccgagagggggtatcgccacgacgaccaaaggcag
aagagctacagctacggtagccacggcgacaagcataaaatggaattttttggcgacagg
aaggatcgtggcaggagtccagacaggcgctggaggaccgaagggggacgccatcggtcc
gagtacgacagggggcggacgccccctcgacacaggagccgagaccgaagcagggagagg
tatcggcacagagacagcaggaggtcccagtcacctgacagacacaggaagagaccacgc
agtcgctcatcgagtcgagacaggaagcggagccgctgggaggatgagcgagagcgacgg
tccgagagctcgtccactctgagcagagagagaagttatgtctccaccaggaaccgcgat
tcagaggagcccttctctgagggcgagcggagcagcttttctgccaggagtcgagactcc
gagcaagcatttccggagcacgacagagagagggagaagggagacgaggagaaagaagag
gaagagctactgaaaccggcgtgggtccgctgcacacacgccgagagctactactccaac
gaccccatggaccaagtgggcgactcgactgtggtcgggaccagtaaactccgggatctt
tacgaacgcttcgaggaggagctcgggagaagacaggagcgagcgaaggctgcgcggcca
aagtgggagccgccaaagaccaaactggacgaagatccaggcgacagcagcagtgagtca
gagtgtgagtcagacgctgatggaagcagctgctccagcagctctgactcggacgtgttt
gatgtcatcgccgagatcaagagaaagaaggctcatcccgaccgcctgcacgacgagctg
tggtacaacgacccagggcagatgaatgatggtcccttgtgtaagtgcagcgccaaggcc
agacgtacaggcatccgccacagcatctacccaggagaggagtcggtgaaacaatgtcgg
gccatgaacaataacgccggaaagctgttccactacaggatcacggtttcgcctcccacc
aacttcctgaccgacagacccacggtgatcgagtacgacgaccacgagtacctgtttgaa
ggcttctccctcttctcccacactcctctcactaatatcccattgtgccgtgtgatccgc
ttcaacatagattacaccatccacttcatagaggagatgacaccagagaactactgtgtg
cgcggactcgagttgttttcttcctacctgttccaggatgtcctcgagctgtacgactgg
aacctgacaggcccagagtttgacaatgactcccctgggtgccctcagttccacttcttg
ccccgttttgtccgatttttaccagatggagggaaggaggtgctgtccatgcaccaggtg
ctgctgtacctgctgcgcagcagcaagcctctggtccccgaggaggagatcgccgacatg
ctgcagtgggaggagctggagtggcagaaatacgcggaggagtgcaagggcatgatcgtc
accaacccgggcatgaaaccaagctcggtgcgtatcgaccagctggacagggagcagttc
aacccagacgtcatcaccttccccatcatcgttcactttggaatccgacccgctcagctg
agctacgccggagacccccagtaccagaagctgtggaagagctacgtgaaactgcgccac
cttctggccaacagccccaaggtcaagcagatggacaagcagaagctgatgcagagagag
gaggcacttcagaagatccgtcagaagaacacgatgcgtcgagaggtgacggtggagctc
agcagtcagggcttctggaagaccggcatccgctccgacgtctgtcagcacgccatgatg
ctgcccgtcctcacccatcatattcgataccaccagtgtctgatgcacctggatcagctc
atcggctacgtcttcacggagcgctgcctcctacagctcgccatgacgcaccccagccat
cacctcaacttcggcatgaaccccgaccacgcccgcaactccctctccaactgtggcatc
cgccagcccaagtacggggacagaaaagtccaccacatgtacatgaggaagaagggcatc
aacaccttgatcaacatcatgtcccgcctgggacaggacgacccctctccctccaggatc
aatcacaacgagaggctggagttcctgggtgacgccgtcgtcgagttcctcaccagcgtg
cacttgtactacctgtttcccagtttggaggagggcggcttggcaacctacagaaccgcc
attgttcagaaccagcacttggccatgctggccaagaaactggagctggatcgcttcatg
ctctacgctcacgggccggacctttgccgcgagtcggacctgcgtcacgccatggccaac
tgcttcgaggctctgataggcgccgtgtatttggagggaggcttggaggaggcgcggcag
ctcttcggccgtctgctcttcaacagcgagagccttcgggaggtctggctcaactaccca
ccacaccccctgcaggtccaggagccgcagaccgaccggcagctgatcgagacgtctccc
gtccttcagaagctgacccagttcgagagctccatcggggttctgttcacacacgtgcgt
ctgctggcccgggccttcaccctgaggactgtgggattcaaccatctgaccctcggccac
aaccagaggatggagttcctgggagactccatcatgcagctggtggccactgaatacctc
ttcatccacttcccggaccaccacgaaggacatttaacgcttcttcgcagctcgctggtc
aacaaccgcacgcaggccaaagtggcggaggagctggggatgcaggagttcgccatcacc
aacgacaagaccaaacgacccgtcgtcctccgcaccaagactctggccgacctcctggag
tcttttatcgccgctctgtacatcgacaaggacctggagtacgtgcacaccttcatgaac
gtctgcttcttccctcggctcaaggagttcatcctgaaccaggactggaacgaccccaag
tctcagctgcagcagtgctgtttgaccctgaggacggagggcaaggagcccgacatcccg
ctgtacaagaccctgcagacggtgggaccctcgcacgctcgcacctacacagtcgccgtc
tacttcaaaggcgaccggatcggctgcggcaaggcccgaggtgaggtgaggacgccgtcg
ctggccgccccccccccagaaggaaatcaatcgattgcttag
DBGET
integrated database retrieval system
