Takifugu flavidus (sansaifugu): 130513726
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Entry
130513726 CDS
T09160
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130513726 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130513726 (spata13)
Membrane trafficking [BR:
tfs04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130513726 (spata13)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
PH
SH3_9
Motif
Other DBs
NCBI-GeneID:
130513726
NCBI-ProteinID:
XP_056868680
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All DBs
Position
17:complement(6015855..6027587)
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AA seq
1252 aa
AA seq
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MSKEEERDGALSTSEDPLPRLHAPRADAPIRSRPLSDSYPFYSQAERSGPTYLLSGCGAQ
VQPITTCPDENGFNGLSSSAWSSPVIGQPDGKPSRIMKLFSNSKKGPAAAPSSAAEQASW
AGLSGLGVIDSFKKLRSSVLQGIQSKGANIGDGEAFSSGAGVSHGANNHVPEGCSVSNGN
TAHQSMGMSLCDSDMEDYYDDGDDEEGNADGLTRNTVFSRSIRRAYGAGRISLFDTGNGK
PMEKSTSATAYGQKPTQATNVNPQQEKTNETSNVKVLSRLSKSAENLQIFKAPFRRKAQA
SGLSVPDEELLQRPVKAQRATNIQRTASASSVDLQDNALSNRKNPVKPKGPMLKLVGSVT
DLTVRRRSTSTPSPTSPSLMSPLSRLHDDYSRRASWLTTSERQQRPSPVRACALSVGHAP
LVHSQPTGDANQEHQEVFIPVFLDPSETNGSTSPGTSGLNESPTEAPNPEEECDLSALSQ
KESPQEPADMTNLPVMESSEQQVKKALLEVEDVSPTSSSTPTGSPTCVSEPPSPPPPADE
AQTSSAEAVPVKPRQRSGRQRPRPISDYGQLISRTHSIPEEAAQQHAKDGTSDALLQKDC
VGGSSCEAHGNCDGINGDVRNRRHRPLSVIGGLDVYPPNAEDKDEHLSSPLSRPPIPSHQ
VPPYKAVSARFRPSTFSQSTPIGLDRVGRRKLHRVLSGGMAECSMALDDSVSEEEEEGSF
DELTDVTPYLQPGVELSVLNEWISSGRAVHAEALWDHVTMEEQELAFKAGDVIRVVDASH
PDWWWGRGGDREAWFPSSFVRVRVNQEDSGAESTESVAGQEAQSSRETHNLQHREQMRTN
VVQEIMNTERIYIKHLKDICDGYIRQCRKHPDMFTELQLKTIFSNIEDIYKFQRQFLRDL
EKNYNKEEPHLSEIGACFLLQGEGFSIYSDYCNNHPAACVELQRFMKLGKFKHFFEACRL
LQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDYTGVSKAYEAMKNVASLINE
RKRRLESIDTIAHWQVAILHWEGSDVLERSSELIHSGELTRIVRQGKMQQRSFFLFDHQL
IYCKKDVLRRDLLHYRGRMDTDQTEVLDVPDGRDQDLGLTLKNALRLRNASTLEFMCVLC
CRKAEDKQRWLQAFARERQRVKEDQEMGMEISEEQRKQAIANARRVKQGKSNSIGYSGSV
PPHHQTLHPLHQRHITIPTSVPQQQVFSLAEPPKRKPYHLLYSITRNAFFRK
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaagaagagagggatggggccttgtccaccagtgaagatcccctcccgcgc
ctccacgcccccagagctgacgcacccatccgaagccgacccctcagtgattcatacccg
ttttacagccaagctgagagaagcgggcccacgtatctgctgtctgggtgtggcgcccaa
gtgcagcccataaccacatgtccagatgaaaatggattcaacggcctcagctcttccgct
tggtccagccccgtcataggccagcctgacggaaagccttccagaattatgaagcttttt
tcaaattcaaagaaaggacccgctgctgctccgagttcagccgccgagcaggcctcctgg
gcggggctctcagggctgggggtcattgactctttcaaaaagctgcgatcttctgtgctc
caaggtatacagagcaaaggggccaacatcggtgatggagaggccttctcttctggtgct
ggtgttagccatggagcaaataatcatgtcccagagggatgcagtgtgtctaatggaaat
actgctcaccaaagtatggggatgagcctgtgtgactcagatatggaggactattacgat
gacggtgatgatgaagaaggtaatgcagatggcctcacgcgcaacacggtgttctccagg
agtatcaggagagcgtacggagcgggccgtatctctttatttgatacggggaatgggaaa
ccgatggaaaaaagcacaagtgcgacggcttacggacagaaaccaacccaggcaaccaat
gtgaacccacagcaggagaaaacaaacgagacctccaatgtgaaggtgctgagcagactg
agcaaaagcgctgaaaaccttcagatttttaaggcaccgttcagacgcaaagctcaagct
tcagggctttctgttcctgacgaagagctcctccagaggccggtaaaggcacagagggct
acaaacattcagaggacagccagcgcttcctcagtagacctccaggataatgctctgagt
aacaggaagaaccctgtgaagcccaaggggccaatgctaaagctagtaggcagcgtcaca
gacctgactgttcgacggaggtcgacttccaccccgagccccacatctccatctctgatg
tctcctctgagccgcctccatgacgactactcccgacgggcgtcttggctgacaaccagc
gagcgacagcagaggccctcacccgtcagagcttgtgccctgtctgtcggacacgcccct
ctggtccattcacagcctacaggcgacgccaaccaggagcaccaggaggtctttatcccg
gtatttttggacccatcagagacaaatgggtcgacctcacctggtacctctggtctcaat
gaatcaccaaccgaagccccaaaccctgaagaagaatgtgatttatctgccctgagccag
aaagagtccccacaagaaccagctgatatgaccaatttaccagttatggaatcatctgag
cagcaagtgaaaaaagctcttctagaagtggaagatgtctccccaacaagcagcagtacc
cccacaggctccccaacatgcgtctcagaacctccttcacctcctccccctgctgacgaa
gcccaaacgtcttctgcggaagctgttccggtcaagcccaggcaacggagcgggcgccaa
aggcctcggcccatttctgattacggacagctcatttccaggacccactccattcccgag
gaagcggcgcagcagcatgctaaagacgggacgtcggatgcactcctgcagaaagactgc
gtcggcggcagctcctgcgaggctcacgggaactgcgacggcatcaacggggacgtccgg
aacaggaggcatcgaccgctgtctgtgatcggaggattggatgtttaccccccgaatgct
gaggataaggatgagcatctctcttcccctctgtcgcggcctcccatcccctcccaccag
gtgcccccctacaaggcggtgtcggccagatttcgcccctccacgttctcccagagcacc
cccatcggtctggatcgagtcggacggcgaaagctgcacagagtgctcagcggtggtatg
gctgagtgttccatggcgctggacgacagcgtgagtgaagaggaggaggagggcagcttc
gacgagctcacagatgtcacaccctacctccagcccggggtggaactctccgtgctcaat
gagtggataagctctggacgcgcggtgcacgccgaggcgctctgggaccatgtaaccatg
gaggagcaggagctggcgttcaaagctggcgatgttatccgtgtggttgatgcgtcacac
ccagactggtggtggggcagggggggcgacagagaggcctggttcccctccagctttgtc
agggtgcgagtgaaccaggaggactcgggggcagagagcacagagagtgtagcgggccag
gaggcgcaaagctccagggagactcacaaccttcagcacagggaacagatgagaaccaat
gtggttcaggaaatcatgaacactgaacgcatctacatcaaacacctgaaggacatctgt
gatggttacatccgccagtgccgcaaacacccggacatgttcaccgagctgcagctgaag
accatcttcagcaacatagaagatatctacaagtttcagaggcagtttctcagagacctg
gagaagaattacaacaaagaggagccacatctcagcgagataggagcttgctttctactg
cagggagaagggttttctatctactcggactactgtaacaatcatccagctgcttgtgtg
gagctgcagcgcttcatgaagctgggcaaatttaagcatttctttgaggcctgccgtctc
ctccagcagatgattgacatttcaattgctggttttttgctcaccccagtccagaaaatc
tgtaaataccccctgcagctaggagaactgctgaaatacacccccaaagaccacagtgac
tacactggagtaagcaaagcatatgaagccatgaagaatgtagcgagtcttataaatgag
aggaagcgaaggctggagagcattgacaccatcgctcactggcaggttgccattctgcac
tgggagggcagcgatgtgctggagcgcagctcagagctgatccactctggcgagctgacc
cggatcgtccgacaaggcaaaatgcaacagcgcagcttcttcctcttcgaccaccagcta
atatactgcaagaaagacgtcctgcgccgcgaccttctccactaccgcggacggatggac
acggaccagacagaagtgctggacgtgcctgacggacgggaccaggacctgggcctgacc
ctaaagaacgccctgcgtctgcgtaacgcctccactctggagtttatgtgtgtgctgtgc
tgcagaaaagccgaggacaagcagaggtggctgcaggcgtttgctagggagagacagaga
gtcaaggaagaccaggagatgggaatggaaatcagcgaggaacaaagaaaacaggctatt
gctaatgccagacgggtcaaacaagggaagagcaacagcattggctactctggttctgtc
ccaccacatcaccaaacccttcacccacttcaccagcgtcacatcaccatcccaaccagc
gtgcctcagcagcaggtgttttcattggctgagcctcccaagcggaaaccctatcacctg
ctgtacagcatcacccggaacgcctttttcaggaaatga
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