Takifugu flavidus (sansaifugu): 130513821
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Entry
130513821 CDS
T09160
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130513821 (trpa1b)
Ion channels [BR:
tfs04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130513821 (trpa1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
DUF5798
PKD_channel
Motif
Other DBs
NCBI-GeneID:
130513821
NCBI-ProteinID:
XP_056868908
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All DBs
Position
17:complement(6606230..6633033)
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AA seq
1165 aa
AA seq
DB search
MNFGREVARQTSCYTYVIEDEDPALASLNVFQLANKGDLALLENLVKKNPEALTERDETG
ATPLHHAAAGGYITLIQFITALVDPEGRHRSSAELQHIYISRHLNRAAFAVLLITYIWEV
FGPTSFSTSEINSCDDQGNVPLHCAVEKNKAESCRALLDLGADPNILNVALLAPLHLAVS
LKHNNLVELLLSYSNTDSNLQGDLGNTPTILACSINNCDALTMLLKHGAKLCKQNKLGHF
PIHAAAFAGAKKALEVILDIGEELGHQRYMHINYLDKSRSSPLHLAVRGGNIDAIYFCIT
NGAKIDQQQNDKSTPLHLACTQGAFEVVKMMLSSYGPVEDVINLTDGAHQTPLHRATIFD
HTELAEYLISLGADINCTDYKGNSPLLLATSCGAWKTVSLLLSKGASVNVKDTCGCSFLH
LAILQPKGLKNIPEEVLQHNNVKALLSCEDNEGCTPLHYACRLGIHDSVKNMLGLSGKDG
LTYKSKDKKSALHFAAQYGRINTCHRLLETMTDSRLLNEGDERGLTPLHLASKEGHTKVV
ELLLRRGALFHSDYKGWTCLHHAANAGYTLTMDILLSTNPKLLDKVDEDGNTALHLAARE
GHVAAVKLLLSRGATLVLNKSYTSFLHEALQNGRKDVVNAVIDSDQCSEALTLFEPDTPQ
RCPIVDMIELLPDTYKHLLDSCVRESDDDHNSADYHIEYSFRWLQTPLEKKLWEKNGYRP
LAAVNAMVYYNRLELLNHPVCKKYLAMKWLAYGSKAHFLNILLYLLGLIPLTYLIVSLRP
SMSTNGTGDHNITMVKVSFQEQSLLLSFCMMMVLVMNIYAIIKELVQISQQRLKYFKDYS
NQMDWSVAIFSLTFIIPVMLNVNSSFQWQAGAMAVLQSWVGLLMYLQRFESVGIYVVMLS
EIMKTLFRVVLLFFFLILAFSLAFHALMLNQKEFQSLPLSVMQTFVMMVGELNYQNNFLD
PYLKDELPFGLLTYFVFVNFIIVMPILLVNLMIGLAVGDIAEVQRNASLKRIAMQIELHT
ALEERLPYWFVKQVDKNSVVVYPNRKCSKHHISQLITGIDETDEVWSRVQAKSQQCSKLQ
NELQKQKYRLKEMSGMLEKQHCLLKLIMQKMEISSEADEYDGPVNLRGSTWLSLRKTSRA
GRTVSRWVPLMKAIEQKKKKRPEDK
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcggcagagaagtggcccgacagaccagttgttacacatacgtgatagaggat
gaggatcccgccctggcgagccttaatgtcttccagttggccaacaagggtgacctagct
ctcctggagaacctggtgaagaagaacccagaggccctcacggagagggatgagactgga
gcgaccccgcttcatcacgctgccgcggggggctacatcaccctgatccaattcatcacc
gctctcgtagatccggagggtaggcatagatcttcagctgaactccagcacatttacatc
tcgcgtcatctaaaccgagcagcatttgcggtattgcttatcacctacatttgggaggtg
tttggacccacttctttctctacctcagagataaacagctgtgacgatcagggtaatgtt
cccctccactgcgctgtggagaagaacaaggcggagagctgcagggctctgctggacctt
ggagccgaccccaacatcctcaacgtggccctcctggcccccctgcacctggctgtcagt
ctcaagcacaacaatctggtggagctactgttgtcctacagcaacacagacagcaatctc
cagggagaccttggcaacacccccaccatcctggcctgctccataaacaactgcgacgca
ctcaccatgctgctgaagcatggagcaaagctctgcaagcagaacaagcttggccatttc
ccaattcacgccgccgccttcgcgggggcgaagaaagcactggaagtgatcctggacatt
ggggaggaacttggccaccagagatacatgcacatcaactacttggacaagtcccgaagc
agtccgctccacctggctgtgcgtggcggcaacattgacgccatctatttctgcatcaca
aatggagccaaaattgaccagcagcagaatgacaagtccacgccgcttcacttggcgtgc
actcagggagcgtttgaggtggtgaagatgatgctgtcctcctacggcccagtagaagac
gtcatcaaccttacagatggagcacatcagactcccctacacagggccacgatatttgac
cacactgagctggccgagtacctcatttctctgggcgcagacatcaactgcacggactat
aaggggaactctccgctgttgctggctacgagttgcggagcgtggaaaactgtgagcctg
ctcctgtcaaaaggggcaagtgtgaatgtgaaagacacgtgcggctgcagcttcctgcac
ttggcaatcctgcagcccaaaggcctgaaaaacatcccagaggaagtgctgcagcataac
aacgttaaggccttgctaagctgcgaagataacgagggctgcaccccgctccattacgcc
tgcagactgggcatccacgactcggtcaagaacatgctgggcctctccgggaaggacggc
ctcacttacaagtccaaggacaagaaatcagccctgcactttgctgctcagtacggccgc
atcaatacatgtcaccgcttgttggagaccatgacggactcccgtctgctgaacgaaggt
gacgagcgaggcctcacgccgcttcacttggcatccaaagaaggccacaccaaggtggtg
gagctgctgctgcgtaggggagccctctttcacagtgactacaagggctggacgtgcctg
caccacgctgcaaatgcaggatacacactaactatggacattctcctgtccaccaatccc
aaattactggacaaagtggacgaggacgggaacaccgcgctccaccttgcggcgcgagag
ggccacgtggccgccgtcaagctcctgctgtcccggggagccacgctcgtcctgaacaag
agctacacgtcgttcctccacgaggccctgcagaacggaaggaaggacgtggtcaacgcc
gtgatcgacagcgaccaatgttctgaagctttgacgttgttcgaacccgacaccccccag
aggtgccccatcgtagacatgattgagttgcttccagacacttacaagcacctgttggac
agctgtgtcagggagtcggatgatgaccacaacagcgctgactaccatatcgagtacagt
ttccgatggcttcaaacgcccctggaaaaaaagctgtgggaaaagaatggctatcgcccc
ctagctgcagtcaacgccatggtgtactacaaccgcctcgaactcctcaatcaccctgtc
tgcaaaaagtaccttgcaatgaaatggctggcttacgggagcaaggctcatttcctgaat
attcttctgtacctgttgggcctgatccccctcacctacctgatagtgtcgctgaggccc
agcatgagcaccaacggcacaggcgatcataatatcaccatggtgaaggtgtccttccaa
gagcaaagtctgctcctgtccttctgcatgatgatggttctagttatgaatatatacgcc
ataataaaggagctggtgcagatttcacaacagcgtctgaaatacttcaaggactattcc
aatcagatggactggagtgtagctatcttctctctgaccttcatcattcccgtcatgctc
aatgtcaatagctctttccaatggcaggcaggagcgatggcggttctgcagtcctgggtt
ggacttctcatgtatctgcagaggtttgagagtgtcggcatctatgtcgtgatgttatcg
gaaatcatgaagacgctgttccgtgttgtcttgctgttctttttcctgatattagcgttc
agtttggccttccatgctctcatgctcaaccagaaagagtttcaaagcctgccgctctca
gtgatgcaaacgttcgtgatgatggtcggagaactgaactaccagaacaatttcctggac
ccttacctgaaggatgagcttcctttcggcctcctgacttactttgtttttgtgaacttt
attattgtcatgcccattctgctggtaaacctgatgattggtttagcagttggggacatc
gctgaagtccaaagaaacgcctctctgaagagaatagccatgcagattgaactccacact
gctctggaggaaagactgccttactggttcgtcaaacaggtggacaaaaactccgttgtc
gtctaccccaaccgcaaatgctccaagcatcacatcagccagttaatcactggtattgat
gagacagatgaagtctggagccgtgtgcaggccaaatcccagcagtgctctaaattgcag
aatgagctccaaaaacagaagtacaggctgaaggagatgtcaggcatgctggagaagcag
cactgcctgctgaagctcatcatgcagaagatggagatctcctcagaggccgacgagtac
gacggccccgtgaacctcaggggcagcacgtggctgagcctgcgcaagacgagcagagcg
gggcgcacggtgtcccgctgggtgccgctgatgaaggccatagagcagaaaaagaagaaa
agaccagaagacaagtga
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