Takifugu flavidus (sansaifugu): 130513929
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Entry
130513929 CDS
T09160
Name
(RefSeq) paired amphipathic helix protein Sin3a-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130513929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfs03036
]
130513929
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
130513929
REST complex
130513929
Heterochromatin formation proteins
Other heterochromatin formation proteins
130513929
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
130513929
NCBI-ProteinID:
XP_056869201
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All DBs
Position
2:complement(12243342..12256031)
Genome browser
AA seq
1284 aa
AA seq
DB search
MKRRVEDRELVFAPQQQQSHHPAVQGIAESFQQRTLVSVPAIIEAAADSMQPSTGIQYSL
SHSYQNASGHGHVHNAAPLVGPHGHSLTVAQGPTVVQGPVHPPTSITSAQGQQFQRLKVE
DALSYLDQVKLQFGNKPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDLIMGFNT
FLPPGYKIEVQTNDLVNVTTPGQIHYITPHGISVQTVPATGPSVQASSHPQQQGPPQGGP
HTASNTPTIPTQPAPNKTSKPIHSPAHTPTSQPSPSIPAYASPRSPTVQPHTPVSSTPSS
GPPFQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPA
LTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSILLGKATPDRAESVRNDHGGTVKRPL
LNTKQRLSQNGLAVRRPAGLGPTPPVKKKPKIMGKEHNMNDVSKHSTSTETLFFEKVRKA
LRSSEAYDNFLRCLHIFSQELISRAELVQLVIPFLGKFPELFSWFKNFLGYWESGHGESS
HAESLPKERATEGIAMEIDYASCKRLGPSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSF
PSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLESNLATIRALETVQRRLSRMSAEEQ
LRFKLDNTMGGSSEVIHRKAIQRIYGDKAHDIIDGLHRNPAVSVPIVLKRLKMKDEEWRE
AQKGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIEMLYDDRQERASEET
ATPPLTGPHMNLAYDDSQILDDAAALIIHHVKRQVGIQKEDKYKIKQIIHHFIPDLLFAR
RGELSDVEEEEEDEEEDVESDEHNPKKHNGLLGSGLSKSKLLFSNTTAQKLRDTDDAYNL
FFVNNYWYIFFRLHHILCSRLLKIYGQAEKQIEEETRERELEREALGIKKDKNENPAIQL
KIKEPMDVDVEDYYSIFLEMVRNLLDGNMEPAQYEDSLREMFTIHAYTAFTMDKLIQNIV
RQLQHLVTDEVCVRVMDMYLSECSNKATGGTAATQSVRATAEGGYHRKAEQLMSDENCFK
LSFAKSRGSVSLAVELLDTEEENSDEPADAERWSEYLGRFLNSDSASMELREHLSQKPVF
LPRNLRRIRKCQRGWERLQQQKMTRVPSDKSLEDNGELKIECMFKLNTYKMVYVCKSEDY
MYRHTALTRAHQSHQRVNTGLHRRFQAWLDAWAKENVTANMDADTHKWLMGDDKEGLLSC
TTTCNPEVLHYLSVNKYRVKYRTL
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcgcgtggaggaccgggaactggtatttgcgccccagcagcaacagtcgcat
catccagcagttcagggtattgcagagagttttcaacagcgaactctcgtctcagtgcct
gcgataatcgaggcagccgcagacagcatgcagccgtccactgggatccagtattctctc
tctcatagctaccagaacgcatctggccatggacacgtccataacgcagccccactcgtt
ggcccccacggccacagccttacagtggcccagggcccgactgttgtccagggtcccgtt
catcctcccacatcgattacttcagcacaaggacaacagtttcagaggctgaaggttgaa
gatgccctgtcctatctggatcaagtgaagcttcaatttggaaataagccacaagtgtat
aatgattttcttgatattatgaaagagtttaagtcccagagtatagacactcctggagtc
atcaaccgcgtgtcacagctatttaagggacatcccgatcttattatgggttttaatact
ttcttgccacctggatataagatcgaggtccaaaccaacgatctcgtcaacgtgacaact
ccggggcagatccactacatcaccccacatggcatttcggttcagactgttcctgcaact
ggaccatctgttcaggcctcaagtcatcctcagcagcagggtcctccacagggtggcccc
catactgccagtaacactccaacaattcccacccagcctgctccaaataaaaccagcaag
cccattcattctccagcccacacacccaccagtcagcccagcccatccatcccagcctac
gcctcaccgcgatcacccacagttcagccccacactcctgtcagcagcacaccgtccagt
gggcctcctttccagaacaatcagcctgtggaattcaaccatgccattaattatgtcaac
aaaatcaagaaccgcttccagggtcaacctgatatctacaaagccttcctggaaatcctg
cacacataccagaaggaacagcggaacgctaaagaggcaggaggcaactacaccccagca
ttaactgaacaggaggtctacacacaggtggccagactctttaagaaccaggaggacttg
ctgtcagagttcggacagtttcttcctgatgcaaacagctccattctcctgggaaaggca
acaccagacagagcagagtctgtgcgtaatgatcacggtggcacagtgaagaggccgtta
ctgaacaccaaacagaggctgagccagaatggtctggcagtcaggagacccgctggactg
ggacccacacctcctgtaaagaaaaaacctaaaataatggggaaagagcacaatatgaat
gacgtcagcaaacacagcaccagtacagaaacattgttcttcgaaaaggtaaggaaagct
cttcgaagctctgaggcctatgacaacttcctgcgctgtcttcacattttcagccaggaa
ttaatttcccgtgctgagctggtgcagttagtgatcccatttcttggaaaattcccggag
cttttttcatggttcaaaaattttttgggctactgggagtcgggtcacggtgaatcgagc
cacgcagagagtttacccaaggagcgagcaacagagggcatcgccatggagattgactat
gcctcttgtaagaggttgggacccagctatagagcactaccaaagagctaccagcagccc
aagtgcaccggaaggacgccactgtgtaaagaggttctgaatgacacgtgggtgtcgttt
ccctcgtggtctgaagattctacatttgtgagctcgaagaagactcagtatgaggagcat
atttacagatgtgaggatgagcgatttgagctggatgttgtcctggaatccaaccttgcc
acaatacgagccctggagacagtgcagcggaggctttcccgcatgtctgcagaggagcag
ctacgcttcaagttagacaacacaatgggaggctcttcagaggtcatccaccgaaaagct
atccagaggatatacggagacaaagcccatgacatcatcgatggcctccatcggaatcca
gctgtgtctgttcccatagtgctgaaaagattaaaaatgaaggatgaagagtggagggaa
gctcaaaaaggattcaacaaaatctggcgggaacagaatgaaaaatattacttgaaatct
cttgaccaccaaggcatcaacttcaagcagaatgacaccaaagtgctgcgttcaaagacc
ttactcaatgaaattgagatgttgtatgatgatcgccaagagcgagcatcagaggaaacc
gccacgcctccactgactggcccgcacatgaatctggcctacgatgacagccaaatactg
gatgatgctgctgcgctcataatccatcatgtcaaaagacaggtgggcatccagaaagaa
gacaagtacaagatcaagcagatcatccaccactttatccctgacctcctgtttgcacgg
cgaggtgagttatctgacgtggaggaagaggaagaagatgaggaagaagacgtagagtca
gacgagcacaaccccaagaagcacaacggtctgctgggcagcggcctatccaagtccaag
ctcctctttagcaacacaacggctcagaagctgcgagacacagacgacgcctacaacctg
ttcttcgtgaacaactactggtatatcttctttcgtcttcaccacatcctttgttcgcgt
ttgttgaaaatctacgggcaagcagagaagcagatcgaggaggaaacccgagagcgtgag
ttggagcgcgaagcgctggggatcaagaaagataaaaatgaaaacccagccatccaactt
aagataaaggaaccaatggatgtcgatgttgaggactattactccatctttctggagatg
gtgcgcaatcttttggacggaaacatggagccagctcagtacgaggactcactgagggaa
atgtttactatccacgcctatacagccttcaccatggacaaactcatccagaacattgtc
cgccagctccaacacctggtcacagatgaggtatgcgtgcgtgtaatggacatgtacctg
agcgagtgttccaacaaagccacaggaggcacagcggcgacacagtctgtaagggccact
gcagaagggggctaccatcgcaaagccgagcagctcatgtcggatgagaactgtttcaag
ttgtcatttgcaaagagccgagggtccgtcagtctggccgtagagctgctggacacggag
gaggagaactctgacgagccagcagacgctgagaggtggtcggaatacttgggacgattc
ctgaactcggactcggcctccatggagctgcgtgagcacctctcccagaagcccgtgttc
ctccccaggaacctgcgacggatacggaagtgccagcggggatgggagcggctgcagcag
cagaagatgaccagggtcccctctgacaagtctctggaggacaacggcgagctgaagatc
gagtgcatgttcaagctcaacacctacaagatggtctacgtctgcaagtcagaggactac
atgtacagacacacggcgctgacacgagctcatcagtcccaccaacgggtcaacactggt
ctgcacagacgctttcaggcctggctggacgcctgggccaaggagaacgtgaccgccaac
atggatgcagacacccacaagtggctgatgggagatgacaaagagggtctgctgtcctgc
accaccacctgcaaccccgaggtcctccactatctcagcgtaaacaagtaccgggtgaag
tacagaacgctgtag
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integrated database retrieval system
