Takifugu flavidus (sansaifugu): 130514024
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Entry
130514024 CDS
T09160
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04217
Necroptosis
tfs04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130514024
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130514024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130514024
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
130514024
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
130514024
Multi subunit type E3
LUBAC complex
130514024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
Zn_ribbon_RanBP
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
130514024
NCBI-ProteinID:
XP_056869366
LinkDB
All DBs
Position
17:complement(1580058..1587253)
Genome browser
AA seq
1091 aa
AA seq
DB search
MCSSLSSVQMDEVRRRAQSILSISGSAQDVKTEVQTIANISLPLSEKYQHLEVENILREN
TEGNNSQEVLVSLGRLVKAFSILEKYGCNLTSPGRPKFWRSVKHNNPVFRTTVDAVKGGR
RVLYLYGYINQQVDGLSFPEDVSEPDKGNVAAVTLEVMVLRTEVDMLIKGSHPHPEHFME
IVPSIILQDKTSDTVVIQPGDKQQEDNQQPPASLPAAVLAGQPLKPPPAAVCKLCGGPSS
VVCPSCDSPSFCDACDDLYHRHPSRASHKRDKIPKSKQETCSICGLNVHAQCPTCVLKLC
LKCDLLFHSHPDRKGHKRSVIAAAKTSSPSLSPWECSHCTTVNEMQAVLCMTCERPRLAT
ATVQDSPTQPSMSLNTEWQCKSCTVMNQGSSVLCEVCERPRLATRPPAASDVSHLKSLCA
NTHRQWICQFCTYVNTGLTLACEMCNLSCKDAAQQTQMSTTDPPLPKPRVNMDLKRQKIM
KEDGLNLIHQIKEAEMSGISPEEVYAAIVCSGNSIKPCVWLKSELPHLLDEICAIAASVQ
LSCPAGGDETCPERGDKEERPQQSDGPEATGASVKLSRAEAKVAWLAAGGNTDRAVRQLL
RDRQRKMKELHALGFRDVSQCEEALRLSGGEVTGALSLLQRPLLEPFHQRIWTDQPEPPI
DPKHPDKQRMCRRLLALYDLPSWGRCELVLSLLQEPDISYSLEDVVQAVKESHDKDFIRR
LLNNECPCCLCIFPLSKMQSLTSCQCSVCHECFRMHFTIAVRDRHIRDMVCPVCCEPDIN
DQEQLDSYFSTLDIQLRDCLDGDVYELFHKKLTEHALMKDPKFLWCYHCTSGFIYDGDQL
KVTCPSCRKSFCAQCKKPWEPQHQDLSCEQFQLWKRENDPEYQRQGLAGYLRDNGITCPH
CRFQYALTKGGCMHFSCSQCRYQFCSGCNNPYHTTACKAAQCSYTGLHAHHPRDCLFYLR
DWEPARLQVLLQRNGVEFNTEPSTGTQTDACCVMEQKDEGGQQIDSPCGVQTQPGQAGLC
EKHYREYLVSLINAHSLDPALLYNIQELIRACERYQADSQRGENEEDNAYHARLLKKLTG
IPLGEKVPRNK
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagcagcctttcgtccgtgcagatggatgaggtccggaggagagcccagtccatc
ctgtccatctcaggttctgcccaggatgtgaagactgaggtccagactatagccaacatc
tctctgcctctgtctgagaagtaccagcacttagaggtggagaatattctgagagagaac
acagagggaaacaactctcaggaggttctggtgtccttgggtaggttggtcaaagccttc
agtatcctggaaaagtatggctgtaacctgacgagtcctggcaggcccaaattctggagg
agtgtcaagcacaataacccagtcttcaggaccactgtggatgcagttaaaggaggtcgc
agagttctttatctgtacggttacatcaaccagcaggtggatggccttagtttccccgaa
gatgtctctgaaccagacaaaggaaatgttgctgccgttacgcttgaggtcatggttctg
cgtacggaggtggacatgctgataaagggcagccaccctcacccagaacacttcatggaa
atcgtcccctccatcatccttcaggataagaccagcgacactgtggttattcagcctgga
gacaaacagcaggaagacaaccagcaacctccagcttcacttcctgcagcagtcctcgca
ggacaacccttgaaaccaccaccagccgctgtctgtaaactgtgtgggggcccttcgtct
gttgtttgcccttcctgtgacagtccttccttttgtgatgcctgcgatgacctctatcac
cggcatccatccagagccagtcacaaaagagataagataccaaagtccaagcaggagacc
tgcagcatctgtgggctgaacgttcacgcgcagtgtcccacttgtgtcctgaagttgtgt
ttgaagtgcgacctgctcttccactcccatcctgaccgcaaaggtcacaagaggagcgtg
atcgctgcagccaaaacatccagtccgtctctgtcaccgtgggagtgttctcactgcaca
actgtcaacgagatgcaggccgtcctctgcatgacctgcgaacgtcctcgacttgccacg
gccactgttcaggacagcccgacgcaaccctcgatgtctcttaacacagagtggcagtgt
aagagctgcaccgtcatgaatcagggcagtagcgtcctctgtgaagtgtgtgagcgcccc
cgcctggctacccgcccccccgcggcatctgatgtttctcacctcaaatctctgtgcgca
aacacgcacaggcagtggatttgccagttctgcacttacgtcaacaccgggctgacgctg
gcgtgcgagatgtgcaacctgtcgtgtaaagacgccgcccagcagacgcagatgtccact
acagacccacccctgccgaagcccagagtgaacatggacctgaagagacagaagataatg
aaggaagatggcctgaatctcatccaccagatcaaagaagcggaaatgagcggcatcagt
cccgaggaggtttacgccgccatcgtgtgcagcggcaacagcatcaagccttgtgtttgg
ctgaagtccgaactgcctcacctgttggatgaaatctgcgccatcgccgcctccgtacag
ctcagctgcccagcagggggcgatgagacatgtcctgagagaggagacaaagaggagcgc
ccgcagcagagcgatggccctgaagccacaggtgcaagcgtgaaactttccagagccgaa
gccaaggtggcgtggttggcggcgggaggaaacacggacagagcagtgagacagctgctg
agagacagacagagaaaaatgaaggagctgcacgcccttggcttcagagatgtttctcag
tgtgaggaagcgctccgactcagcggcggtgaagtgacgggggctctgtctctgctgcag
cgccccctgctggaacctttccaccagcgaatctggaccgaccaacctgagccaccgatc
gaccccaaacacccggacaaacagaggatgtgccggcgtttgctcgcactttacgacctg
cccagctgggggcgctgtgagctcgttctgtcattgcttcaggagccagatatcagctac
tctctggaggatgtagttcaagctgtaaaagagtcacatgacaaggatttcatccgacgt
ctgctcaataatgagtgcccctgctgcctgtgcatcttccctcttagcaagatgcagtct
ctgacttcctgtcagtgctccgtgtgtcacgagtgcttccgcatgcacttcaccatcgcc
gtgagagaccgacacatcagagacatggtgtgtcccgtctgctgcgagcccgacatcaac
gaccaggaacagctggacagctacttctccacgctggacatccagcttcgggactgcctc
gatggcgacgtctacgagctcttccacaaaaagctgacagagcatgccctgatgaaagac
cccaagttcctgtggtgctatcactgcacgtccgggtttatctatgatggggaccagttg
aaggtcacgtgtccctcctgtaggaagagtttctgtgcccagtgtaagaagccgtgggag
cctcagcaccaggatctgtcctgtgagcagttccagctgtggaagcgggagaacgacccg
gaataccagagacagggcctggctggatacctgcgggacaatggcatcacctgtccccac
tgcaggttccagtatgctctgactaaaggtggctgcatgcacttcagctgctcccagtgc
aggtaccagttctgcagcggctgcaacaacccctaccacacgacagcatgtaaagcagcc
cagtgcagttacactggcctgcacgctcatcatcctcgagactgcctcttctacctgaga
gactgggaaccagcccggctgcaggtgctgctgcagcggaatggcgtggagttcaacaca
gaaccttcaactggaacgcaaactgatgcttgttgtgtgatggaacagaaagatgaagga
ggtcaacaaatcgattccccctgtggtgtccagactcagccaggacaggctgggctctgc
gagaagcactacagggagtacctggtgagtctgattaacgcccactctctggatccggca
ctgctctacaacatccaggagctgattcgggcctgtgaaagataccaggcggactcacag
agaggtgaaaatgaggaagacaacgcttaccatgcccgactgctgaagaaattgacgggg
atccctttaggagaaaaagtgcctcgaaacaaatga
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integrated database retrieval system
