KEGG   Takifugu flavidus (sansaifugu): 130514064
Entry
130514064         CDS       T09160                                 
Name
(RefSeq) integrin beta-1-like isoform X1
  KO
K05719  integrin beta 1
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs03271  Virion - Rotavirus
tfs04145  Phagosome
tfs04510  Focal adhesion
tfs04512  ECM-receptor interaction
tfs04514  Cell adhesion molecules
tfs04530  Tight junction
tfs04810  Regulation of actin cytoskeleton
tfs04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    130514064
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130514064
   04514 Cell adhesion molecules
    130514064
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    130514064
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130514064
   04530 Tight junction
    130514064
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130514064
   04810 Regulation of actin cytoskeleton
    130514064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tfs04131]
    130514064
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tfs04147]
    130514064
   04515 Cell adhesion molecules [BR:tfs04515]
    130514064
   04090 CD molecules [BR:tfs04090]
    130514064
Membrane trafficking [BR:tfs04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    130514064
Exosome [BR:tfs04147]
 Exosomal proteins
  Proteins found in most exosomes
   130514064
Cell adhesion molecules [BR:tfs04515]
 Integrins
  Integrin beta subunits
   130514064
CD molecules [BR:tfs04090]
 Proteins
  130514064
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt I-EGF_1 EGF_2
Other DBs
NCBI-GeneID: 130514064
NCBI-ProteinID: XP_056869409
LinkDB
Position
17:complement(9998157..10018255)
AA seq 802 aa
MDLRLLLISTLLGTFYNSYAQKEGNECIIANAKHCGECIQAGAKCGWCKDPAFLKQGEAV
STRCDELQSLVKRGCNVDMIESPKGEKKILRNKPVTNRKKGGEKLQPHEITQIQPQKLNL
TLRSGEPQTFDLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMQKMSKITSDFQ
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYRNVLNLTSDGKQFNTLVGQQQI
SGNLDSPEGGFDAIMQVAVCGNLIGWRDVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLEDNVYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYQELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPSGVTITYTSRCKNGVVNGGENGRKCSNISIG
DEVTFSISVTSKGCPNEGMSDTIKIKPLGFTEELEITLNFICGCDCQKVGINKSPLCHSN
GTYECGDCRCEDGHVGRECECSSNDVATEDMDRTCRKDNTTDICSNSGDCVCGTCECKNR
DNPEERYSGQFCECDNFSCDRSGNKLCGGHGRCECRVCVCDLMWTGSACDCSLDNTTCMA
SNKQICNGRGTCDCGICKCTDPKFQGPTCEICPTCPGVCTEHKECVQCRTFGTGEKKDTC
EKDCSYFTLIKVKDRDKLPQPNDAAYPVMHCKERDANDCWFYYTYAVNNNTVKEVHVVDS
LDCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQEN
PIYKSPINQFQNPSYGRKAAVL
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggacctgagactgctcctgatatcaacattgttaggaactttttataattcatatgca
cagaaagaggggaacgagtgcatcattgccaatgccaaacactgtggggagtgcatccag
gctggggctaaatgtggctggtgtaaagacccggcgttcctgaagcagggtgaggcggtg
tcgacccgctgtgatgagctgcagtctctggtaaaaagaggctgtaatgtggacatgatt
gaaagcccaaaaggggagaagaagatcctgagaaacaaaccggtaacaaaccgcaaaaaa
ggaggagaaaaactgcagccacatgaaatcacccaaatccagccacagaagctcaacctc
acccttcgatcgggggagccccagacctttgacttgaagttcaaacgagcagaagattac
ccgattgacctgtactacctgatggacctgtcatactcaatgaaggatgatctggagaat
gtgaagaacctgggaacaagtctgatgcagaagatgtcaaagatcacttctgacttccag
ataggttttggctcgtttgtggaaaagacagtgatgccatacatcagcactaccccggcc
aagctgctgaacccgtgcacaggcgaccagaactgcaccagtccattcagctacagaaac
gtcctcaacctgaccagcgatggcaagcagttcaacaccctggtgggccaacagcaaatc
tctggaaatctagactctcccgagggggggtttgatgccatcatgcaagtggctgtgtgt
gggaacctgatcggttggagggatgtgacccgtctgctggttttctccactgatgctggg
ttccactttgccggtgatggcaaactaggtggcattgtcctgcccaatgatgggaaatgt
cacttggaggataacgtctacacaatgagccactattatgactatccctccattgctcac
ctggttcaaaaactgagtgacaacaacatccagaccatctttgcagtgacggaggagttt
cagcctgtttatcaggagctgaaaaatctcataccaaagtctgcagtagggactctgtct
gccaactcaagcaatgtaatcaaccttattatagatgcttacaattcgctttcatctgaa
gttattctggagaacagcaagcttccctcaggtgtgaccataacatacacatcccgctgt
aagaatggagtggtcaacggaggcgaaaatggacgaaaatgctccaacatctccattgga
gatgaagttacctttagcatcagtgtgacatcaaagggctgccctaatgaaggaatgtct
gacaccattaagattaagcccctgggatttactgaagagttggagatcacgctcaacttt
atctgcggctgcgactgccagaaagtcggcatcaacaagagtcccctctgccacagtaac
ggcacctatgagtgtggagactgcaggtgtgaggatggacacgtggggagagagtgcgaa
tgcagcagcaatgacgtcgccacagaagatatggaccgaacgtgccgtaaagacaacacg
actgacatttgcagcaacagcggtgactgtgtatgtggcacatgtgaatgcaagaacagg
gacaaccccgaggagagatacagcggccagttctgcgagtgtgacaacttcagctgtgat
cgctccggcaacaaactgtgtggagggcacggacgctgtgaatgcagagtttgtgtctgt
gatctgatgtggactggaagcgcctgtgattgctcactggataacaccacatgtatggcc
agcaacaagcagatttgcaatggcaggggcacgtgtgactgtggcatctgcaagtgcact
gaccccaaattccagggtcccacctgtgagatctgccctacctgtccaggagtgtgtact
gaacacaaagagtgtgtccagtgccggacgttcggcaccggtgagaagaaggacacatgc
gagaaagactgcagttacttcactctgatcaaagtgaaggaccgggacaagctaccgcaa
cccaacgacgctgcgtaccccgtgatgcactgcaaggagagggacgccaacgactgctgg
ttctactacacctacgccgtcaacaacaacacagtgaaggaggtccatgtggtcgacagt
ctggactgtcccgctggtcctgatattatcccaattgtggcgggcgtggttgccggcatc
gtcctgatcggcttagccttgcttcttatctggaaactgctgatgatcatccacgacaga
cgagagtttgccaaatttgagaaggagaagatgaacgccaaatgggatacacaagaaaat
cccatatacaagagtcctatcaatcagttccagaaccccagttatggacgtaaagctgct
gtcctttaa

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