Takifugu flavidus (sansaifugu): 130514090
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Entry
130514090 CDS
T09160
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tfs01001
]
130514090 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130514090 (prpf4bb)
Enzymes [BR:
tfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130514090 (prpf4bb)
Protein kinases [BR:
tfs01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
130514090 (prpf4bb)
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130514090 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
CoV_S1_C
Pkinase_fungal
CSTF_C
Motif
Other DBs
NCBI-GeneID:
130514090
NCBI-ProteinID:
XP_056869432
LinkDB
All DBs
Position
17:3528893..3535568
Genome browser
AA seq
1016 aa
AA seq
DB search
MAEVEMDIASSRMNNGNEHVKQDLESQDRSGNEDSGDMSEEEEEEEGLAVNNGEKTEEGS
KHHSSSGKHKRKKHKHRSKHKKHKHASDEDKDRKRKHRHKHRKHKRKEGSSPSAAIIFGS
SSHRKGDSSPSSGNPSLDDRALLEDLEKQRAMIKAELDSQLMEGKVQSGMGLILQGYNSG
SEEDGEARIRNGEQHQRSSGKPATPRKGKSGKSRRDSIEGGKASARHRSRSRSGNRLEQT
KETKDKMTKTPKDTAVKERGRARSRSKDRKRADSTDRSKERTRKSDSPSNMRGEQKSSRS
DKRSSSQQDDRPNQERASRQSRSPRRERPSRSEAERDKRPGKSPSKDASSGKENRSPHRR
APHSPARKRSASPRHRDAHHPPASTSERTSKRSHSPSRTRTPPRRGRSRSPDFSVRRREM
DRQDSPVRKRYRPDFGRDRSRDTSPRSAPRRRISRSPLRRRSPSPRRRSRSSPRRRSPMR
HRSMERDRYGRLRQYRRSSSRNRDRRRRHSRDEDKFKGSLSEGMKVDQESSEEEVLEDFD
GEEIDEEALIEQRRQQRMAIVQKYKAGNEDGNMISEPSSPQSSTRSRSPSPDDILERAAA
DVKEYERENLNTFEASIKAKHNLIAQEKDGANPKRPSAPDMFTESDALFAADFDSARMRA
AGVGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGQGVFSNVIRARDTARAG
QEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLS
MNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILK
LCDFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLYELYTGKILFPG
SSNNHMIKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTVMSTMNP
TKDLLADMIGGQRLPEDQRKKVMQLKDLLDGTLMLDPAKRISINQALQHPFIQEKI
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggttgagatggacatcgcatcctcaagaatgaataatggaaacgagcacgtg
aaacaggatctggaaagccaggatagaagtggaaacgaggacagtggagacatgtcggaa
gaagaggaggaagaggaggggctggcagtaaataatggcgagaaaacggaagaagggtcc
aaacaccacagcagcagtggtaaacacaagaggaaaaaacacaagcaccgcagtaagcac
aaaaagcacaaacacgcctcggatgaggacaaggaccgaaagcggaagcatcgtcacaaa
cacaggaaacacaaacgcaaggaaggctcctctccctccgccgccatcatcttcggctcc
tccagccacagaaaaggcgactcctctccctcctctggaaatcccagtttggacgacagg
gctttgctcgaggatttggaaaaacagagggccatgattaaagctgagttggacagccag
ctgatggaggggaaggttcagtctggaatgggcttgattctccagggttacaactctgga
tctgaagaagatggagaagcgcgcattcgaaacggagagcagcatcagcggagttctggc
aaacctgcaactcccagaaaggggaaaagtgggaaatctagacgggactcaatagaggga
ggtaaggccagtgccaggcaccggagtaggagtagatctggaaacaggctagaacaaacc
aaggagaccaaggacaagatgaccaaaacccccaaggacacggctgtgaaggaaagaggc
cgcgccaggagccgatctaaagacagaaagcgtgcagacagcactgacaggtccaaggaa
agaaccaggaagtctgactccccctctaacatgagaggagaacagaaaagcagccgttct
gacaaacgttcctcctcccagcaggacgacagaccaaaccaggagagggcgagtcgtcag
tccagatcgccacggcgagaaaggccaagccgttcagaggccgagcgggacaagcggcct
ggcaagtcgccatctaaggacgcttcttcaggtaaagagaaccgctcccctcacagacga
gcgcctcacagccccgctcggaaacgcagcgcctcgccgcgccacagagacgcccaccac
cccccagcaagcacctcagaaaggacgtccaaacgcagccactccccctccaggacgagg
actcctccccgcagaggccgcagccgctcacctgacttcagtgtcaggaggagggagatg
gaccgccaggactcacctgtgaggaagcgctatcggccagacttcggcagggatcgatcc
cgagataccagtcccagatcggcccctcgccgcaggataagtcgctcgcccctgagacga
aggtccccatcgccacggcgacgctctcgctcttcgccccgcagacgctccccaatgaga
cacaggtcaatggaaagagaccgatatgggaggctgagacagtacaggcgctcgtcgtcc
cgcaaccgggacaggaggagacgacacagccgcgacgaggacaagttcaagggcagcctc
tccgagggaatgaaggtggaccaggagtcgtccgaggaagaagttttggaggattttgat
ggggaggagatagacgaagaagcactcattgaacagcgtcggcagcagcggatggccatt
gtccagaaatacaaggccgggaacgaggacggcaacatgatatcggagcccagcagcccc
cagagcagcacgcgcagccgttccccctctcccgacgacatcctggagcgagcggcggca
gacgtgaaggagtacgagcgggagaacctcaacaccttcgaggccagcatcaaagccaag
cacaacctcatcgcccaggagaaagacggagccaaccccaagaggccgtcggcccccgac
atgtttacagagtccgatgctttgttcgccgcagacttcgacagtgcgaggatgagggcc
gcaggtgtagggaaggacttcaaggagaaccccaacctcagggacaactggaccgatgct
gaaggctactacagggtcaacatcggggagacgctggacaaacgctacgacgtttatggc
tacacgggtcagggcgtgttcagcaacgtgatccgagccagggacactgccagggctggc
caggaggtggcagtcaagatcatccgtaacaacgagctcatgcagaagacgggtttgaaa
gagttggagttcctcaagaagctgaatgacgccgaccccgacgacaagttccactgcctt
cgcctcttcaggcatttctaccacaagcagcacctgtgtctcgtgtttgagccgctcagc
atgaacctgcgagaggtgctgaagaagtacgggaaggacgtgggactgcacattaaggcc
gtgcgctcctacagccagcagctgttcctggctctcaagctgctcaagcgatgcaacatc
ctccacgccgatatcaagccagacaacatcctggtgaacgagtcaaagaccatcttgaag
ctgtgcgattttggttccgcctctcacgttgccgacaatgacatcaccccgtacctggtg
agcaggttctaccgagctccagaaatcattatagggaagccctatgactatgggattgac
atgtggtctgtgggctgcactttatacgagctgtacacgggaaaaatcctctttcctgga
tcttctaacaaccacatgatcaagctggctatggacctcaagggcaagatgcccaacaag
atgatccgtaaaggcttgttcaaagaccagcacttcgatcagaacttgaacttcctctac
attgaagttgacaaagtgacagaaagggaaaaggtgaccgtgatgagcaccatgaacccc
accaaagacctgctggcagacatgatcgggggccagcggctcccggaggaccagaggaag
aaggtaatgcagctgaaggacctgctggacggcaccctgatgctggacccggccaaacgc
atcagcatcaaccaggcgctgcagcacccgttcatccaggagaagatctga
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