Takifugu flavidus (sansaifugu): 130514114
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Entry
130514114 CDS
T09160
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130514114 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfs03032
]
130514114 (pola1)
Enzymes [BR:
tfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130514114 (pola1)
DNA replication proteins [BR:
tfs03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
130514114 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
DUF3603
Motif
Other DBs
NCBI-GeneID:
130514114
NCBI-ProteinID:
XP_056869460
LinkDB
All DBs
Position
17:complement(8547518..8583800)
Genome browser
AA seq
1467 aa
AA seq
DB search
MAPVSHPDKDVDAPDGDDGGDTCGLAKSRSRREKRAKSGRMSALDQLKKAKKGEKIKYKV
EELTSVYEEVDEEQYSKLVRDRQEDDWIVDDDGIGYVEDGREIFDDDLEEDIVENKGRAG
AKGADAKKNMKKCIVAKPNTIKSLFMNSNVKRPAEKDVDLSKDELLGDILQDLHSEKKTL
LTPPPVVTLKKKKSHGSPMNPFSIKPQMSKESMGSKSKVIKPPPANSTARPSIRHPSSIP
APPTERHKTKEEELETEVSHTLDFDEVDFDELMEVELEEEKPVVKDEAKSKGEAKVAPKV
EPKMEPHDPILFSSKTESSWEQEEEDRASAVPVDIQVDTSQLPLVEEPNGEQVFRFYWLD
AFEEPYSHPGVVYLFGKVWIESAKSHVSCCVTVRNIERTMYLLPREYRVNPKTGEVSDTP
VGMMDVYQEFNELSEKFKIMKYKSKKVEKNYAFEIPDVSSHGEYLEVRYSAEFPALPSDL
KASTFSHIFGTNTSFLEHLLLSRKIKGPCWLDVTTPQRMSQPVSWCKVEALALKPDLISV
IKDLVPPPLTVMSISLKTVQNPKTLHNEIVSLAALIHHQFQMDKAAPEPPYQSHFCVISK
PSDCIFPYDFKEAVRKKNGKVEIAQTERTLLGFFLAKMHKIDPDVLVGHDIFGFDLEVIL
QRISVCKVPHWSKIGRLRRANMPKLGGRSAFAEKSATCGRLVCDVEISAKELIRCKSYHL
TELTAHILKVERVTVPQENIRNLYSNSPHLLRLLELTWTDAKLILQMMCELNVLPLALQI
TNIAGNVMSRTLMGGRSERNEFLLLHAFHEKNYIVPDKPSFKKTQLEMGEGEDEGAVGKG
KRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQREAHNLQRKNE
EEDQEEIPEIPDSSLEMGILPKEIRKLVERRKQVKQLMKQQDINPDAYLQYDIRQKALKL
TANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNLDVIYGDTDSIMINTN
SKSLEEVFKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVENHGDGRYTLK
QELKGLDIVRRDWCDLAKECGNYVIGQILSDQSRDVIVENIQKHLVEMGEKVAAGDIPLN
QYEIHKALAKDPQDYPDKKSLPHVHVALWINSQGGRRVKAGDTVSYIICKDGSTLAASQR
AYTQEQLQKQEGLSLDTQYYLAQQVHPVVSRICDPIEGIDGVLIATWLGLDPSQFRAQQQ
YQREDENHLLGVSLQLTDEERYKDCENFTFTCPQCGTDNICDSVFEGTGLNLEPSLMRCC
HIPCESRPIDYSVNICNKLLLDIRRHIKKYYAGWLVCEDQACQNRTRRLPIAFSRQGPIC
PACSRATLRPEYSEKALYNQLCFYRFIFDWEAAFSKIQADEKSHVKNCNKEKEVYRRLKE
VPDKALAASSYSDINLAKLFQAFTSLK
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtgtcacacccagacaaagacgtggacgctccggatggcgatgatggaggc
gatacctgcggcctggcaaagtctcgctcgagacgggagaagagagcaaagtccgggaga
atgtcggccctagatcagctcaagaaagccaagaagggagagaaaatcaaatataaggtg
gaggagttgacaagtgtgtatgaggaggtggatgaagaacagtattcaaagcttgttcga
gaccgacaagaagacgactggattgttgatgatgatggaataggctatgttgaggatgga
agggagatctttgacgatgacctggaagaagacattgtggaaaacaaagggagagctggt
gctaaaggagcagacgcaaagaaaaacatgaagaaatgtattgttgccaagccgaacacc
attaagagcctgttcatgaacagcaatgtaaaaagacctgctgagaaagatgtggattta
tccaaagatgagctgttaggagatattttgcaagacctgcactctgagaaaaaaactctt
ctgactcctccaccagttgtcactcttaagaaaaagaagtctcatggatcccccatgaac
cccttctccataaaacctcagatgtcaaaggagtctatggggtcaaaatccaaggtcatc
aagccaccaccagctaatagcacagccagaccgtccatccgtcacccctcctccatcccg
gctcctccaacagagagacacaagacaaaagaggaggagctagaaactgaagtgagtcac
acactggactttgacgaggtcgacttcgatgagctgatggaggtcgagctcgaggaggag
aaacctgtggtaaaggacgaagctaaaagtaaaggagaagcaaaggtggcgcctaaagtg
gagcctaaaatggaaccccatgatcctattctattctccagcaagactgaaagttcgtgg
gaacaagaggaagaagacagggccagcgcagttccagtggatatccaagtggacaccagc
cagctccccctggtggaggagccaaatggggagcaggtgttccgcttctattggttggat
gcctttgaagagccatacagccatccaggtgtggtgtacctgtttggaaaagtgtggatc
gagtcagccaagtctcacgtcagctgctgtgttacagtcagaaacattgagaggaccatg
tatctcctgcctcgggagtatagagtaaaccccaaaactggggaggtgtctgacacgcct
gtaggaatgatggatgtctaccaggagtttaatgagctttccgagaagttcaagatcatg
aaatacaagtcaaagaaagtggagaagaactacgcatttgagattccagatgtttccagt
cacggcgagtacctggaagtcagatattctgctgagtttcctgcactaccttcagacctg
aaggcctcaacattttctcacatatttgggaccaacacctcctttctggagcacctgctg
ctcagcaggaaaattaaaggcccgtgttggctcgacgtcacgacgccacagcgcatgagt
cagcccgtcagctggtgtaaggtggaggctctggccctgaagcctgacttgatcagtgtg
atcaaagacctggtgcccccacccctcaccgtcatgtccatcagcctcaagacagtgcag
aaccccaaaacgctccacaacgagatcgtgtccttggcagctctcatccaccatcagttc
cagatggacaaagctgcgcccgagcctccataccagtcacatttttgcgtcatcagtaaa
ccatcagactgtatcttcccatatgatttcaaagaggccgtgaggaagaagaacggaaaa
gtggaaatagcccagacagagcgaactctgctcggcttcttcttggcaaagatgcacaaa
attgaccctgatgtgctggtgggtcacgacatctttggtttcgatttagaagtgattttg
cagagaatcagcgtttgcaaagtcccccactggtctaaaattggacgtctccgtcgggcc
aatatgcccaaattagggggtcgcagcgccttcgcagagaagagcgccacctgtggccgc
ctggtgtgtgatgtggagatctcagccaaggagctaatacgctgtaaaagttaccacctg
actgaactgaccgcacacatcctgaaggtggagagagtcacggttcctcaagaaaacatc
agaaatctttacagcaactcccctcacctgcttcgcctgctggagttgacgtggacggac
gccaagttgatcctgcagatgatgtgtgaactgaatgtgttgcctctggccctgcagatc
accaacatcgctggcaacgtcatgtcccggactctgatgggcggtcgctctgagaggaac
gagtttctcctgcttcacgccttccatgagaaaaactacattgttcctgataaaccctcc
ttcaaaaagacccagctggaaatgggtgaaggagaagacgaaggtgctgtggggaaaggc
aagcggaagaaaaaggccgcctatgctggaggtttggtgctggatcccaaagttggtttt
tatgacaagtttgtgctgttgcttgacttcaacagcctgtacccctcaatcatccaggag
ttcaatatctgcttcaccaccgtgcagagagaggctcacaacttgcagagaaagaatgag
gaagaggatcaagaagagattcccgagattccagattcaagcctggagatgggaattctc
cccaaagagattaggaagctggtggagcgacgtaaacaagtcaaacagctgatgaaacag
caggacatcaacccagacgcctacctgcagtatgacatccggcagaaagctctgaagttg
actgctaacagcatgtacggatgtttgggcttcagctatagccgcttctacgccaagcca
ctcgccgccctcgtcactcacaaaggcagagagattttgatgcacactaaagagatggtt
caaaagatgaatctggatgtcatctatggcgatacagactccattatgataaacaccaac
agcaaatctttggaagaggtcttcaaacttggcaataaggtgaaggctgaagtaaacaag
ctctacaagctcctggagatcgacattgacggcgtgtttaagtcacttcttctgctgaag
aagaagaagtacgcagctttggttgtggaaaaccatggcgatggacgctacaccttgaaa
caggagctcaaaggtttggacatcgtgcgcagagattggtgcgacctggccaaagaatgt
ggcaactatgtgattggtcagatactgtcggatcagagccgtgacgtgattgtggagaat
atccagaaacatctggtggaaatgggggagaaggtagcagctggagacataccactaaac
cagtatgagatacacaaggctctggctaaagatcctcaggactatccagacaagaaaagc
ctccctcatgtccacgtggcactgtggatcaactctcagggtggtcgccgcgtcaaagct
ggagatacggtctcttacatcatttgtaaggacggctccacgctggcagccagtcagcga
gcttacacacaagagcagctccagaaacaggagggtctcagtctggacactcagtactac
cttgcccagcaggtccaccctgtggtgtcccgaatctgtgaccccatcgagggcatcgat
ggagtgctcatagctacatggctgggtctggatcccagtcagttccgggctcagcagcag
taccagagggaggacgagaatcacctgctgggagtttctctccagctgaccgacgaggaa
cgttacaaggactgcgagaatttcaccttcacctgcccacagtgcggcacagacaacatc
tgtgacagtgtttttgaaggaaccggattaaacctggagcccagcttgatgcgatgctgc
cacatcccctgtgagagtcggcccattgactactctgtcaacatctgcaacaaactgctg
ctcgacatccgtcgacacatcaaaaaatactacgctggctggttggtgtgtgaggaccag
gcctgccagaacaggaccagacgtttgcccattgccttctctcgccagggacccatctgc
cccgcctgctccagagccaccctcagacctgagtattctgagaaagctctgtacaaccag
ctctgcttctatcgcttcatcttcgactgggaggctgcattttccaaaatccaggctgat
gagaagagtcacgtgaagaactgtaacaaagaaaaagaggtgtaccgccggctgaaagag
gtgcccgacaaagctttagcagccagcagctactccgacattaacctggccaaactcttc
caagcgtttacctccctcaagtaa
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