Takifugu flavidus (sansaifugu): 130514140
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Entry
130514140 CDS
T09160
Symbol
lama1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04510
Focal adhesion
tfs04512
ECM-receptor interaction
tfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130514140 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130514140 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130514140 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_N
Laminin_B
Laminin_II
Laminin_G_3
F5_F8_type_C
betaPIX_CC
Motif
Other DBs
NCBI-GeneID:
130514140
NCBI-ProteinID:
XP_056869497
LinkDB
All DBs
Position
17:complement(840250..859438)
Genome browser
AA seq
3083 aa
AA seq
DB search
MKLLLLVLLLDGAAAQLRGLFPAILNLATNAVVDSNATCGDPDPEVYCKLVEHVPXRPVK
NPHCARCDAASLLLRERHPITNAIDGTNRWWQSPSIKNGRQFHWVTITLDLKQIFQVAYV
IIKAANSPRPGNWILERSLDGVTFDPWQYYAISNSECLSHYNVTPRLGPPTYKRDTEVIC
TSYYSRLNPLENGEIHTSLINGRPGADDLTPELLDFTSARYIRLRLQRIRTLNADLMMLS
TRDPRDIDPIVTRRYYYSIKDVSVGGMCICYGHAQNCPLDPVTKKLHCVCEHNTCGENCN
ECCPGYHQQPWQPGTVHEGNTCEKCNCHNKATDCFYNQTVADLSLSLNIHGVRRGGGVCV
SCLHNTAGLNCESCTDGYYRPAEVSPYSDFPCVACNCDLRGSESPVCSRDETHPGQCVCK
EGFAGERCDTCAFGYRDFPQCVRCECDAAGSTNADPCRPCTCKVNVMGAHCDLCKPGFYN
LQEKNPLGCTDCFCFGVSDVCESSAWSTTQVLHRDAWLLPRPAPQNITVLQDNDLPSPGN
TSSGHSHQDVLLWDAPDGFLGNKLGSYGGFLNYSLLYDIPSDNEDRSIPAHSDVMIKGNG
RALHSIPHFLFVSPLAESVVAIVMVDGQFRDVQSGDPVSRDELLSALADVTTLTVRVGLN
ATADGPIRLSWISLDAADPGPGSALDAADPGPGSAQQAVAVEKCECPWGYTGTSCETCLP
GFYRVGGVLFGGNCMQCECNDHASECDISGDCWGCTHNTSGPHCEECLPGFYGNATEGTA
DDCQLCPCPLTNPSNSFSPTCVLEGSGKVVCDQCQEGHTGSNCERCASGFYGNPRAANGT
CVRCDCHGNVNASEAGHCDVITGECLRCLFNTGGRHCEVCQPGYYGDAVLAKNCQECGCD
VNGAPSSVCDVTTGQCLCKENVTGRTCDQCQSGFFGLHSEMGCQLCGCNQSGSLSESCDE
QGRCPCVKGVGGDKCDRCGHGYYGVDVSSCRACYCVHTGGNCDPQSGECMCPAFTEGPNC
NRCETGYWGHDPTTGCTPCSCSKDGSSAPDCDATSGQCWCRKGFGGRSCDHCAAGHHGYP
SCLPCGCDLAGTDEKFCNTTLNTCDCLDTGVCVCKVGVSGRRCEECVAGRFALSVDNPDG
CSPCFCSGVSGDCEEQGGLIRRPVTLDQSPGLLSVVSQLNLQGVVSGVYQQGGDMLLDTR
HLNTSGLAGPLYWRLPPQFEGQQLLSYGGSLSYIITFYAEDGAGLSNQEPQIMIKGGTLK
KMVIYMDVVAPSNGIRTNHEIRMTEHKWKYFNSVLETSVGRSDFMSVLGNIEYVLIKASY
GSRLQQSRISNITMETALENEDGSVVGGDMARSIESCICPTGYTGLSCQDCAAGFFRQPP
SELSPQSQRLMSVRPCVPCRCNNHSESCDAASGECQQCQHHTSGWSCQQCSQGYHGNVSG
SISDCSLCACPLKDNSFSPTCVSEGVLGDFRCTACVPGYEGRYCEKCSVGYYGNPTLPGG
VCSRCNCSGWGSLQPLCDQLNGKCDCKAGVKGQSCDQCEDRHILQEGECVSCEDNCTGVM
LNDLEDLDDHLAAVNISSFVVASYLRLAALENQTRGVQAMAAENTSASLQLSGLEEQLGL
MSLDLGVLLQLVVNMSGDLQRLDTSAQDTIHQGSQQIQNINILQDKVQALQQEAERLNAT
AEEELTTANRTRLLQELELMLRSMRVTNLTAASSLANQELLRATSVLSLQSDLLSRRAAV
DDGLRHLSTSLSSNSGTLRHLQAQLSGATQQNMQTHVLLEVLHNLTQQHQSVQQDISQER
LLVAGLMQDTQLVLGDSLSIMEDLTNTTSQVEVFGSYLDQWSPLLRKQVDGLVGGLKMTD
SLEKVYLSEKHAQQLEDDAHSLHSSLLSVYNASQNGSQLLQGGSSGVPEQVEALRQEALM
ADRSARLLLNATVQSEPPLPEESRTRLNISAAVLETCRQIGASSADLQMNVSMVTSRLGL
FKESFRKFGLLFHHSVTELQSLSNGSLTELQQVQLQAAEADSRLQGALLRLQKLRQQLQD
SSSAVENTSNTVTETQQLTALTHSTVDQARQKLGEVERRTERLIDQIKPLSMLGETINRN
LSDIRELINQARRQAASIKVAVQADRSCVRSYRPQSESRNFNTLSLVLRTSSPNNLLFFQ
GSNTTVDFLALEMYRGKVSLLWDLGSGSTRLEFPGLDITNNRWTRINATRFGAHASLWVH
QLESDSEPLPAVTATSPGPARILDTDRNSWLYIGGLGAHGQRPAALRSTTFQGCLGEAAL
NERNIGLWNYHRREGECGGCFSSPQTEETSFHFDGSGFSLVQKSLRATSTSIVLLFKTLS
PGGLLLYLASNNTRDFLSIELVEGQVRLTFDLGSGALVLTSSRKYNTGVWYKITLQRNKR
KGYLSIMAADQSSEKEVLEAESPGLASDLNRSDFDPIYIGGLPASRPIRRQVVSRAYVGC
IKNVEIARSNFDLLRDAFGVRKGCVLEAVRSVSLLTGGFVQMAPRALGPEVELLFSFSTN
NRSGILLAAVSDDHVQRRRFLSIHLASGALEADIGEVGGATQTVTVVKPKGGFFSDGLKH
SVIVTVNKKTLSIQVDETHLKSIPLLPGRFSNLSPASFFIGGVPVGAGLQLPSRLREISL
SFRGCIQHLVLGGGALVDLSGAFRYEGVTLDSCLLEEAARGAVLPDDPDTEPTMDPVRLP
VVPPTPLGVLPPGALTCAAQVDSSFLPSAAQFGLSKHSHMTFLINPGALRKSVSLKISAR
TRSPDGLLLLLSDAKQMDFAVVKLAGGKVTLSADLGKGPTSVTSPVSITDGLWHTVSAEV
SRRSLALAVDGSKPGSASIRGNQLDVDRRLYLGGLPHAHATRRINVSSSFQGCVRSVHLN
GAVLDLTKPASRHNVTSCFTDDQAGSYFDGSGHALFMRDGYKXGSDVSVSLEFRTSQSEG
VFLGISSAKIDAIGLEMIKGQVVFNVNNGAGRVTVRSVGPMLCDGRWHTVLARKTKHSLN
LQVDGRSYITPNPYPQSTSAETKNPVYLGGYPVGVKQNCLSITTRFRGCLKKIQLIKPHL
SDTLDLSSAHVLSGVTPDSCPVG
NT seq
9252 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgctgctgttggtgctgctgctggatggagctgcagctcagctgagaggcctg
tttcctgccatcttgaacctggccaccaacgccgtggtcgacagcaacgccacgtgcggg
gacccggacccggaggtctactgtaaactggtggagcacgttccgngtcgacccgtaaag
aacccgcactgcgcacgctgtgacgccgcctcgcttctgctgagagaacgacatcccatc
accaacgccatcgacggaaccaaccgctggtggcagagtcccagtatcaagaatggacgg
cagtttcactgggtcaccatcacgctggacctgaaacagatcttccaggtcgcctacgtc
atcatcaaagcagcgaactctcctcgcccaggtaactggatcctggagcgctccctggac
ggggtgacctttgacccctggcagtattacgcaattagcaactccgagtgcttgtcccat
tacaacgtcaccccgagactcggacctccgacctacaagagggacacggaggtcatctgc
acgtcctactactccagactgaaccctctggagaacggagagatccacacctcgctgatc
aacggccgccccggagcggacgacctgacgcccgagctcttggacttcacctcggcccgt
tacatccgactcaggctccagcggatcaggacgctcaacgccgacctcatgatgctgagc
acgcgggacccccgagacatcgaccccatcgtcacacggaggtattattactccatcaaa
gatgtgtccgtgggtggaatgtgcatctgttatggccacgcccagaattgccccttggac
ccggtcacaaagaaactacactgtgtgtgcgaacacaacacctgtggagagaactgtaac
gagtgttgccctggttaccatcagcagccatggcaaccgggaacggttcatgagggaaac
acctgtgaaaaatgtaactgtcacaacaaagcaaccgactgtttctacaatcagacggtg
gccgacctctctctgagtctgaatatccacggcgtccgtcgagggggcggagtctgtgtc
tcctgtctacacaacaccgccgggctcaactgtgagagctgcactgatggctactacaga
cctgctgaggtctctccgtattcagactttccgtgtgttgcctgtaactgtgacctgaga
ggatcagagtcacctgtgtgctccagggacgagacgcatccgggtcagtgtgtgtgtaag
gagggttttgcaggtgaacggtgcgacacctgtgcgtttggatacagagactttccccag
tgtgttcgctgtgagtgtgacgctgctggcagcaccaacgcggacccctgcagaccctgc
acctgcaaggtgaacgtgatgggagcccactgtgatctgtgtaaacccggattctacaac
ctccaggagaagaatccgctcggctgcaccgactgtttctgcttcggcgtgtccgacgtc
tgtgagagttctgcttggtccacgactcaggtgcttcatagagatgcttggctcctcccc
cgcccggctcctcagaacattacagtcctccaggacaatgatttaccctcacctggaaac
acttcctctggccactcccaccaggacgttctgctgtgggatgcgcctgacggtttcctt
ggtaacaagctgggctcctatggaggcttcctgaattactctctgctgtatgacattcca
tcggacaatgaggaccgctctattcccgcccactctgacgtcatgatcaagggaaacggt
cgtgctctacattccatccctcacttcctctttgtctctcctcttgctgagagtgtggtt
gccatagtgatggttgacggacagttcagggatgttcagtcaggcgaccccgtgagccgc
gatgagctcctgtcggccctcgccgacgttacgactctgaccgtcagggtcggtctgaac
gccaccgcagatggaccgatacgtctcagctggatctccctggacgccgctgacccgggc
ccaggttctgccctggacgccgctgacccgggcccaggttctgcccaacaggcggtcgcc
gtggaaaagtgtgaatgtccgtggggttacaccggcacttcctgtgagacgtgtctccca
gggttctacagagtgggcggggttttgttcggaggaaactgtatgcagtgcgagtgtaac
gaccacgcgtcagagtgtgacatcagtggcgactgttggggttgtacacataacaccagc
ggtcctcactgtgaagagtgtctccctggtttctatggcaacgccacagaggggacagca
gatgactgccagttgtgtccttgtcctctgacaaacccgtccaacagtttcagtcccacc
tgcgtgctggaggggtcaggaaaggtggtgtgtgaccagtgccaggagggacacacagga
agcaactgtgaaaggtgtgcgagtggtttctatggtaacccacgggcagccaatggcacc
tgtgtgcgctgtgattgtcacggtaatgtgaacgcaagtgaggcgggacactgtgacgtc
atcaccggcgagtgcctgcggtgccttttcaacaccggcggacgccactgcgaggtctgt
cagcccggttactatggagacgcagtgcttgccaagaactgtcaggaatgtggctgtgac
gtcaacggcgccccctccagtgtgtgtgacgtcacaacgggtcaatgtctttgcaaggaa
aacgtgacaggacgcacttgtgaccagtgtcagtcgggctttttcggcctccacagtgag
atgggctgtcagctctgtggctgcaaccaatcgggatcgctgtctgagtcatgtgacgag
cagggccgctgcccgtgcgtgaagggtgtggggggagacaagtgtgaccgctgtggtcac
ggctactatggcgtggacgtcagcagctgcagagcatgctactgtgtccacacgggaggg
aactgtgatccccagagcggggagtgcatgtgccccgcctttacagagggacccaactgc
aacagatgtgaaactggatactggggtcacgaccccacaactggctgcacgccgtgcagc
tgcagcaaggacggaagctccgcccctgactgtgatgcgaccagcggccagtgttggtgc
aggaaggggtttggtggccggtcatgtgaccactgtgccgctgggcaccatggttacccg
tcatgtttaccatgcggctgtgacctggcaggaactgatgaaaagttctgcaacacgacg
ctgaacacgtgtgactgtctggacacgggagtgtgtgtgtgcaaggtgggcgtgtctggg
cgccgctgcgaggagtgtgtcgccggccgattcgctctgtcggtggataatcccgatggc
tgctctccgtgtttctgttcgggggtgagcggcgactgtgaggagcagggggggctgatc
cgacgaccggtcactctggaccagtctcctggcctcttgtcagtggttagtcagttgaac
ctgcagggtgtcgtgtctggggtttaccagcagggcggcgacatgctgctcgacaccagg
cacctcaacaccagtggcttggctggcccactctactggaggctgcccccccagttcgaa
ggccaacagcttctgtcctacggcggctccttatcctacatcatcaccttttatgctgag
gatggcgctgggctgtccaatcaggagccccagatcatgataaaaggtgggaccctcaag
aagatggtgatatacatggacgtggttgcccctagcaacggcattaggacaaaccatgag
atcaggatgacggagcacaagtggaaatactttaactcagtgttggagacgtcggtgggt
cgctcggacttcatgtccgtcctgggcaacatcgagtacgtcctcatcaaagcgtcttac
gggagcaggctgcagcagagcaggatctcaaatattaccatggaaacggcgctggagaac
gaggacgggtcggtggtcggcggggacatggcaagatcgatcgagtcctgcatctgtccc
acgggatacaccggactgtcctgtcaggactgtgccgctggattcttccgtcagccgccg
tccgagttgtcacctcagagtcaaaggttgatgtcggtgcgtccgtgcgttccgtgtcgc
tgcaacaaccacagcgagagctgcgatgcagcgagtggagaatgtcagcagtgtcagcat
cacaccagcgggtggagctgtcagcagtgttcccaagggtatcacgggaacgttagcggc
tccataagtgactgctctctttgcgcctgccccctgaaggacaacagcttcagccccacc
tgtgtgtcggagggagtgctgggagacttccgctgcacagcctgtgttcccggatacgag
gggagatactgtgaaaagtgttccgtcggttactatggtaaccccactttgccaggcggt
gtgtgttcgcggtgtaactgttctgggtggggttctcttcagccgctgtgtgaccagctg
aatgggaagtgcgactgtaaggctggtgtcaaaggtcaatcatgtgaccagtgtgaggac
agacacatcctgcaggaaggagagtgtgtgtcgtgtgaggacaactgcaccggtgtgatg
ctcaacgacctggaagacttggacgaccacctcgccgccgtcaacatcagcagctttgtt
gtggcctcgtaccttcggttagcggcgctggagaaccagaccagaggcgtccaggcgatg
gcggcggaaaacacttcagcctctctgcagctgagcggcctcgaagagcaactcggcctc
atgagcctcgacctcggcgtcttgctgcagctggtggtaaatatgtctggtgaccttcag
agactggacacatctgctcaggacaccatccatcagggctcacagcaaatccagaacatc
aacatccttcaagacaaagtgcaggctcttcagcaggaggccgaacgcctgaatgcgact
gcagaagaagagctgacgacagccaacagaacacgtctgctgcaagaacttgagttgatg
ttgagaagcatgagagtgaccaacctcaccgctgccagcagcctggccaatcaggagctc
ctacgcgccacatctgtgctctccctgcagtcggacctgctctcccgcagggccgcagtg
gacgacggcctccgccacctttcgacctccctcagcagtaacagcggaacactgcgccac
ctacaggcacaactgagcggcgccacacaacaaaacatgcagacacacgtgcttctggag
gtcctgcacaacctgacgcagcagcaccagtctgtccagcaggacatcagccaggagcgc
ctcctggtggcgggactgatgcaggacactcagctcgtgctgggcgacagcctcagcatc
atggaggacctaaccaacaccacctcgcaggtggaggtgtttggcagttacctggatcag
tggagccccctgctgaggaaacaggtggatggtttggttggtggtctgaagatgacggat
tccctggagaaggtctacctttcagagaaacacgcccagcagctggaagacgacgcccac
tccctgcacagctcgctgctgtctgtgtataatgcgtctcaaaatggcagccagctgctt
cagggggggagcagcggcgtcccggagcaggtggaggcgctgcggcaggaggccctcatg
gccgaccggtccgcccggctgctgctcaacgcgacggtccaatcagaaccgcccctgcca
gaggagagcaggactcgcctgaacatcagcgccgctgttttggaaacctgtcgacagatc
ggcgcttcatccgcagacttgcagatgaacgtctccatggtaaccagcagactaggatta
tttaaagaaagcttccggaagttcggtctcctatttcatcattcggtcacagagctgcag
agcctctcaaatggttcactgaccgagctgcaacaagttcagctgcaggctgcagaagca
gactccaggctacagggggcgctactgaggctacagaaactcagacagcagctccaggat
tcttcctctgcagtggaaaacaccagcaacaccgtcacagagacccagcagctcacagcc
ctcacacactccacagtcgatcaggcgcgtcagaaactgggcgaggtggagcgtcgcaca
gagcgtcttatcgaccagatcaagcccctgagcatgctgggagaaacgatcaacaggaac
ctgtctgacatcagagagctgatcaatcaggcccgaagacaggccgcctcgattaaggtg
gcggtgcaggcagacagaagctgcgtgcgctcctacaggccacagtccgagtccaggaac
ttcaacacgctgagtcttgtcttgaggacgtccagtccaaacaacctgctgttcttccag
ggcagcaacaccacggtggacttcctggctctggagatgtatcgtgggaaggtgtctctg
ctgtgggatctgggttcaggtagcaccagactggagtttcccggcctggacatcaccaac
aacagatggaccagaatcaacgccacgcggtttggggctcatgcgtctctgtgggttcat
cagctggagtcggactcggagcccctcccggcagtaacggccacctcgccgggtcccgcc
aggattttagacacggacagaaactcttggctctacattggtggactgggagctcacgga
cagaggccggcggccctgcgctccaccacattccagggatgtctgggcgaagcggccctg
aacgagcggaacatcggcctctggaactaccacagaagggagggagagtgtggaggctgc
ttcagcagtccacaaacggaggagacctccttccatttcgacggatccggattctctttg
gtccagaagtctctacgggcgacctccacctccatcgtcttgctgttcaaaacactgtca
ccaggggggttactgttgtacctggcctccaacaacacgagggactttctgtccatcgag
ctagtagaggggcaggttcgcctgacctttgacctcggctcaggtgcactcgtcctgacc
tccagcaggaagtacaacactggcgtctggtacaagatcacgctgcagaggaacaaacgt
aaaggttacctttccatcatggctgctgaccagtcgtcggaaaaggaggtgttggaggcg
gagtctcccgggctggcgtccgaccttaaccgctccgactttgaccccatctacatcgga
ggacttcctgcctccagacccatcaggcgacaggtggtgtccagggcttacgtgggctgt
ataaaaaatgtggagatcgcccggtccaactttgacctgctgagagacgcttttggcgtc
aggaagggctgcgttcttgaggccgtcaggagcgtgtcgctgttgaccggcggcttcgtt
caaatggctcctcgagctcttggaccagaggtggagcttctcttttccttctccaccaac
aaccggtcaggaattctgctcgctgccgtcagcgacgaccacgttcagaggcggcgcttc
ctgtccatccacctggcctcaggtgcgctggaggccgacattggtgaagtgggaggagcc
acacaaaccgtgacagtggtgaaacctaagggaggattttttagcgatggtctgaaacac
tctgtcatcgttaccgtcaacaagaagaccctgtccatacaggtggatgagacacacctg
aagtccatccctctgttgccgggcagattttctaatttgtctccagcctcattttttatt
ggtggagtacctgtaggggcggggctccagctgccctccaggctgcgggagatttcttta
tccttcagaggctgcatccaacacctggtgttaggaggaggagcgctcgttgacctctca
ggagcgttcaggtatgagggcgtgaccctggacagctgcctgctggaagaggcggccagg
ggggcggtgcttcctgatgacccggacacagaaccaaccatggacccggtccgcctgcct
gtggtaccacccaccccgctgggtgtcctgcccccaggcgctctaacgtgtgcagcacag
gtggactcctccttcctgccctccgcagctcagttcggtttgtccaaacacagtcacatg
acgttcctgatcaaccccggcgccctcaggaaaagtgtgtctctgaagatatcggctcgg
acccgatctccggacggcctgctcctcctcctctccgacgccaaacagatggacttcgcc
gtcgtcaaactggcgggggggaaggtgacgttgtcagccgacctggggaagggtcccacc
tccgtcacctcacctgtgtccatcactgacggactctggcacactgtgagcgccgaggtc
agccgccgctcgctcgccctggcggtcgacggttcaaagcccggctcggcgtccatcagg
gggaaccagctggacgtggacaggcgtctgtacctgggggggctgccgcacgcacacgcc
accaggaggattaacgtcagcagcagctttcagggctgcgttcggtccgtccacctgaac
ggcgccgtgttggatctgaccaaaccggcctcgcgccacaacgtcacttcctgtttcacc
gatgaccaggcaggaagctacttcgacggcagcggacacgccctcttcatgcgcgatggc
tataagntcggatccgatgtttctgtatctctggagttccggaccagccaatcagaagga
gtgtttttaggaattagcagtgccaaaattgatgccatcggactcgagatgatcaaagga
caggtggtgtttaacgtgaacaatggcgccgggagagtgacggtgcgctccgtgggtccg
atgctgtgtgacggccgatggcacaccgtcctggccaggaaaaccaaacacagcctgaat
ttacaggtggatgggcggagctacatcacccccaacccttacccacaatccacctcggct
gagacgaaaaacccagtttacctgggaggctaccctgtcggggtaaagcagaactgcctc
tcaatcaccacccggttcagaggttgtctgaagaagatacagctcattaaaccgcacctg
agcgatacgctggacctaagctccgcccacgtcctctcaggtgtcactcctgactcctgc
cctgtaggctag
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integrated database retrieval system
