Takifugu flavidus (sansaifugu): 130514145
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Entry
130514145 CDS
T09160
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130514145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130514145
03036 Chromosome and associated proteins [BR:
tfs03036
]
130514145
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
130514145
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
130514145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
130514145
NCBI-ProteinID:
XP_056869517
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All DBs
Position
17:789634..802704
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AA seq
653 aa
AA seq
DB search
MGLVAGWRRGGESVVCRTIRRKWTRLTEAFPPLGQDEVPSALMEKEPRKMKNKVSSSQGT
VKKRSWSWQQYLNEQKAEAAPVSLFTQFQSFPTRRAGFKVGMKLEGIDPLHPSMFCVLTV
AEVIGCRLRLHIDGYSECYDFWVNADSTEIRPAGWCKEHNHKLHPPKGQDPSDFDWTAYL
DSSGSQAAPPSLFTSHSASCEFQVGMKLEAVDKKNPGLVCVASVTDVIDGRFLVHFDNWD
DTYDYWCDSSSPYIHPVGWCEEQGRPLTSPQGHPNPENFVWEEYLQETGSSAAPSSAFKP
RPSHGFQVNQKLEAVDRRNPMLIRVATVTAVEDFRVKIHYDGWSQQFDVWCDSDISDLHP
FGWCQRTGHPLEPPPDSSPVSSPSQGVCPTHGCRGVGHIKGARYTGHHSAFGCPYSDINM
RKEVVLPDRLGGERVITLVPVTVCSHGNQPDSSYDMKAESRHQPLMLSVGKRRLSDRLSQ
PSKFLRVKQEEEELEVTAINPAPAETSLQAALHQSIFLSAMSAQPGRDLSLCWEQHRKLL
PGVARETAETVQHWSVQQVAEFVESLPGCEEQSKQFRDEQIDGRAFLLLTQRDIVRIMSI
KLGPALKIYNSILMFKHAKDRGPACAQDSSQVQDQDRSQSDGAIRNQFHAGDT
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgggtttggtggccggctggaggaggggaggtgagagtgtggtctgcaggaccattagg
aggaaatggacgcgtctaacagaagcatttccacccctcggccaggacgaggttccttct
gcattgatggaaaaggaaccaagaaagatgaagaacaaagtcagcagcagtcaagggact
gtaaagaagcgatcttggtcctggcagcagtatttgaatgaacaaaaagcagaagctgct
cctgtttcactatttacacagttccagtctttccccactaggagagctggttttaaagtg
ggcatgaagctggagggtattgacccactgcacccgtccatgttctgtgtgctgactgtg
gcagaggtgattggctgccggctccgtcttcatatcgatggctactctgagtgctatgac
ttctgggtaaacgctgactcaacagaaatccgaccagcaggctggtgtaaagagcacaat
cacaagcttcacccacccaaaggtcaggatccctcagattttgattggacagcttatctg
gactcctctggctctcaggctgctcctccgtctctcttcacctcccattctgcaagctgt
gagtttcaggtggggatgaaattagaggcggttgataagaagaaccccgggctcgtctgt
gttgcctcggtaaccgatgtgatcgacggccgcttcctggttcacttcgacaactgggac
gacacgtatgactactggtgtgacagcagcagtccctacattcatcctgtgggctggtgc
gaggagcagggacgacctctgacctctccacagggtcatccaaacccagagaacttcgtg
tgggaggaatatctccaggaaaccgggtcctctgctgctcccagttcagcctttaaaccg
agaccttctcacgggttccaggtgaaccagaagctggaggcagttgacaggaggaacccc
atgttgatccgagtcgccacagtaacggctgtagaagacttcagggtgaagattcattac
gacggctggtcgcagcagtttgacgtctggtgtgacagtgacatcagtgaccttcaccct
tttggctggtgtcaacgcacaggacaccccctggaaccccccccagattcctcccctgtg
tcctccccctcccagggtgtgtgtcccacccatggctgcagaggagtgggccatataaag
ggcgccaggtacaccggccaccacagtgccttcggctgcccgtactccgacatcaacatg
cggaaggaggtggtgctccccgataggctgggaggggagcgcgtcattacgcttgttcct
gtcaccgtgtgttcccatggcaaccagccagacagcagctacgacatgaaggcggagagc
cgacaccagcccctgatgctctcggtagggaagaggagactttcagacaggttgagccag
cccagcaaattcctccgtgtgaaacaggaagaggaggagctggaggtgacagccattaat
ccagcgccagcagagaccagtctgcaggccgccctccaccagtccatcttcctgtcggcc
atgtcggcccagccaggacgggacctgtccctctgctgggaacagcaccgtaagctgctg
ccaggcgttgctagggagacggcagagaccgtccaacactggagcgtccagcaggtggcg
gaatttgtcgagtcacttcctggttgcgaggagcagtcgaagcagtttagagatgagcaa
attgatgggcgggcttttctccttctcacccaacgggacatcgtcagaatcatgtcaatc
aaactcggccccgccctcaagatttataactctattttgatgttcaaacatgccaaggac
aggggcccggcgtgtgctcaggacagcagccaggtacaggatcaggaccggagccaatca
gacggagcgatcaggaaccagttccacgcaggggacacctga
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