Takifugu flavidus (sansaifugu): 130514418
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Entry
130514418 CDS
T09160
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03030
DNA replication
tfs03410
Base excision repair
tfs03420
Nucleotide excision repair
tfs03430
Mismatch repair
tfs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130514418 (pold1)
03410 Base excision repair
130514418 (pold1)
03420 Nucleotide excision repair
130514418 (pold1)
03430 Mismatch repair
130514418 (pold1)
03440 Homologous recombination
130514418 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfs03032
]
130514418 (pold1)
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130514418 (pold1)
Enzymes [BR:
tfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130514418 (pold1)
DNA replication proteins [BR:
tfs03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
130514418 (pold1)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
130514418 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
130514418 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
130514418
NCBI-ProteinID:
XP_056869974
LinkDB
All DBs
Position
18:5545910..5554810
Genome browser
AA seq
1104 aa
AA seq
DB search
MEFKRRNNDSLMGGAPQSKWAKKNTEWEDSPSQFEEELSMFLDADMDIEDQEGQASHDVI
PVGDLFTTDLNPRWRRPPAPALDPSTDTLVFQQIDLDYYLGVTAAGMPGQSQGKAPIVRM
FGVTDNGNSVCCHIHGFAPYFYVPAPNGFTSAHLGEFQNELNSAVLKDMRSNKDNISVTV
LAVDITRKENMYGYHGKRVLDFLRITMAMPRLIAPAKRLLEQGLKFGPFPLHYYQAFEAN
IDFEIRFMVDTNVVGCCWIELPKGKYRVREENDLLVTDSQCLGKVSFCQYEVDIGWTDFV
SHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEPFIRTVFT
LQSCASIVGSQILCFTQETKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAATLKVN
PFPYLGRIRNSKSVLRDLNFQSKQMGRRENKTMNMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGEDYTGATVIEPEKGYYSI
PIATLDFSSLYPSIMMAHNLCYTTLLQNTQDKDSLSPEDFIKTPTGNFFVKSSVRKGLLP
EILENLLSARKRAKAELKKETDPFKQQVLDGRQLALKISANSVYGFTGAQVGKLPCLEIS
QSVTGFGRQMIEQTKQLLESKYTISNGYQADAKVIYGDTDSVMVKLGVATVNEAMSIGRE
AAEWVSSHFISPIKLEFEKVYYPYLLINKKRYAGLYFSSSADTHDKMDCKGIETVRRDNC
PLVANLINTCLQKILIDRDPQGAVDHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGK
QAHVELAERMRKRDAGSAPNLGDRVPYVITKAAKGAAAYMKSEDPIYVLENSIPIDTQYY
LEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCRA
VLKTDAAVCDFCKKKESELYQKEIYHLNTLEERFSRLWTQCQRCQGSLHEDVLCTSRDCP
IFYMRKKVQKDLDDQSKLVSRFGW
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaaacggcgcaataatgactccttaatgggaggtgctcctcagtccaaatgg
gctaaaaagaacactgaatgggaggacagtccatcacagtttgaagaggaattgtcaatg
tttcttgacgcagatatggatatagaggatcaggaggggcaagccagccatgatgttatt
cctgttggcgacctattcactacagacctcaaccctcgttggaggaggcctcctgctcct
gcactcgacccatcaactgacactttggtcttccagcagattgatttagattattattta
ggggtgacagcggcaggcatgcccggccaatcacaggggaaagccccaattgttcgaatg
tttggggtgacagacaatggcaacagcgtgtgttgccacatccatggttttgcaccttat
ttctatgttcctgctccaaacggtttcacatctgctcacctgggtgaattccaaaatgag
ttgaattctgctgttctgaaggacatgaggtccaacaaagacaacatttcagtcacggtg
ttggccgtggatatcacccgcaaagagaacatgtatggttaccacgggaagcgtgttctt
gatttccttcggataaccatggcgatgcctcgtctcatagctccagccaagagactgctc
gagcaaggcctcaagtttggaccctttcccctacattattatcaggcttttgaggccaac
atagattttgagataaggtttatggtggacactaatgtggtgggatgctgctggattgaa
ctacctaaaggaaagtatagagtgcgagaagagaatgatctgttggtcactgattcccag
tgcctgggcaaggtgtccttttgtcagtatgaagtggatattgggtggactgatttcgta
agccacccagcagagggagattggcagaggattgcaccactccgagtcctaagctttgac
atcgagtgtgcaggaagaaaaggaatctttcctgaagctgacaaggaccccgtgattcag
atcgcttccatggtgcagcgacaaggcgagacggagcccttcattcgcacagtgttcacc
ctccagtcctgcgccagcattgtgggctcccagatcttgtgtttcacacaggagaccaag
ctactgcagagctgggccgagtttttgaggacggtggaccctgatatcattactggatac
aatatccaaaactttgactttccctacctgcttaacagagcagctactctaaaggtgaac
ccttttccctaccttggtcggatacggaatagcaaatcagttctgcgtgatctgaacttc
caaagcaaacagatgggccgcagagagaacaaaaccatgaacatggagggccgggttcag
ttcgacctgctacaggtcctcctcagggactacaaactacgctcttatacactaaacgca
gtcagttttcacttcttgcaagaacagaaagaggacgtgcagcactccatcatcactgat
ctgcagaacggtaatgaacagacgcgccgtcgtttggccgtctactgcctcaaagacgcc
tacctcccgctgcgcctgctgcagaaactgatgtgcgtcattaattacatggagatggcc
agagtgacgggggttcctctcacctacctgctgtcaaggggacagcagatcaaagttgtc
tctcagctccttcgccaggccatgaagcaggacctggtgatgcctgtggtcaagacagaa
ggaggagaagactacactggcgccactgtcattgagccggagaaggggtattacagcatt
cctattgccaccctggatttctcttctctgtatccatccatcatgatggcccacaatctg
tgctataccacgctgctgcagaacacccaagataaagacagcctttcgccggaagacttc
atcaagactccaactggtaatttttttgtgaagagctctgtgaggaaaggacttttacct
gaaatcctggagaatctgctgtcggctagaaagagggccaaagcagagctaaagaaggaa
accgacccatttaagcagcaggtgctggacggccgacagcttgctctgaaaatcagcgcc
aactcagtttacggcttcaccggtgcgcaggtgggcaaactgccctgccttgagatctca
cagagcgtcactggttttggaagacagatgattgaacaaaccaaacagctgctggagtct
aaatacacgatttccaacggttaccaagccgatgccaaggttatttatggagatactgac
tcggtcatggttaagctcggagttgccacggtaaatgaggccatgagcatcgggagggag
gcagcagagtgggtatcctcccactttatttcacccatcaaactggagtttgagaaggtc
tattacccgtatctgctaatcaacaagaagcgatacgcaggcctctacttttcatccagt
gcggacacacatgacaagatggactgcaagggtatcgagactgtccgcagagacaactgc
cccctggtggccaatctcatcaatacctgcctgcagaagatcctcatagacagggatccc
cagggtgctgtggatcacgctaaagaggtgatctcagacctcctctgcaatcgcatcgac
atcagccagctcgtgatcaccaaggaactaacgcgtactgcccaggagtacgcgggcaaa
caggcgcacgtggagctggcagagagaatgagaaaaagagacgcaggcagcgctccaaac
ctgggagaccgggtcccatacgtgatcaccaaggctgcgaaaggagcagcagcgtacatg
aagtcagaggatccaatctatgtgctggagaactccattcccatcgacacgcagtactac
ctggagcaacagctgtctaagcccctgctccggatatttgaacccatcctaggagagagc
aaagctgagagtgtcctgctcaagggcgatcacacgcgctgcaagaccgtgttgacctca
aaagtcggaggcctcatggcgtttgctcagaagaggagcacctgtatcggctgccgagct
gtgctgaagacagatgcggctgtgtgcgatttctgcaagaaaaaggagtctgaactgtac
cagaaggagatatatcacctgaatacattggaggagcgtttctctcgcctgtggactcag
tgtcagcgttgtcaaggttccctccacgaggatgtgctctgtaccagccgggactgtccc
atcttttacatgaggaagaaggtccagaaggacttggatgaccagagcaagctggtgtcc
cgctttggatggtga
DBGET
integrated database retrieval system
