Takifugu flavidus (sansaifugu): 130514454
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Entry
130514454 CDS
T09160
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tfs01001
]
130514454 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tfs04054
]
130514454 (ciita)
Enzymes [BR:
tfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130514454 (ciita)
Protein kinases [BR:
tfs01001
]
Serine/threonine kinases: Other
TAF1 family
130514454 (ciita)
Pattern recognition receptors [BR:
tfs04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130514454 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_14
AAA_16
nSTAND3
DUF815
RsgA_GTPase
AAA_22
NB-ARC
nSTAND_NTPase5
ABC_tran
AAA_29
VapE-like_dom
TsaE
AAA_7
Motif
Other DBs
NCBI-GeneID:
130514454
NCBI-ProteinID:
XP_056870028
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All DBs
Position
18:5267030..5278020
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AA seq
1379 aa
AA seq
DB search
MDPLSQNCTRPLCKVCPDCAINRCSQIRVEHAPAAMDSSRHDCCYSWFHDKTKELPRSLA
PPRTDCWGLNEGNLEHVAGRLTIPLWQNLDRGHKLLLPLIAPVEPVGTTSQSRAAATDTV
WSVDAETELEFALAPFGVNMEGFPPDQGGIAKGPESSENPKMPGLGRVLHGEEGGPDTEV
LETHFSMTPDNLGWMSSGLGSFGSAEGSPGAKMQDEQENLPACPDLADPGTKMQDVDEVP
NMSLEFGDLPEDLSEFLNEQYIVDPEVLLGDPLWNYEEGPSKPGASSEPHDSGSLRENQE
AKQAHKTEKRAKPLNGPEPQPPSDDNTPCKRQRVTDTDQELDLGLSDRLTTPPRVLQLHP
PMHLITIPDPPLYQVVHALSISSPVITIPCSPLTSTFILVPASSPPKSLHPSPLSPADGT
VAPVQMSSSPPGSLSDTASRAVSPSHASPPSPINEGVRVYILEAKAHMSQSCEVIEGGLT
LSSHYVDVQVSQREIVYRCGKNTNKVQDKELIFNGDAHRQNSLLDQSQIFDGSLGDNPKR
YILLMGDAGMGKSTLIKKLCLNWSKDHFPQFDFVFLLDGKMLALTKPIFSLQTLLLNFSS
FATACFDPDAVFAQVMAAPKRVLIIFDGFAEVRDFETLLQTQEKDLSASLQKDSKAQTYT
IKQLFAGILQRAVLRGCTLVLSTRPRGAASQVLRRTDSYLEVCGFSVPDVETYVSRYFTD
PTLRESALEHLKSHRYLHLLCWNPGLCRLVCSVLEGSKNIRELPRTLTELCRQVLDLRVK
GCSPAFTFTPSSVKPENTVEAKEGSSSSEGWVQPVDVQPQSSESAAIEEKEGEEEKAEEA
TGVEEGEEPQELLSQLSCLAWDGVKSHTSVIPDGKYVSPRLKAFGLRTGLLDCHDLRMTH
LISSGEIKGGGGKAKGQKKTRKKVCEENATEREPAKEHILLWANPYLQSYLAALHLCLSR
VVSHRTFFKSLPLLSGPKSCRRCQREVLELTQRFAFGILMEKLETLDAEASLRDALVAKQ
TLLTKHLEDLSHGGLSPAQLLQACHYVYEVSLIRGSPSTDGSDTELKRQSKLPEVLAFRG
VPIDPLDAFVVWHVLERAGQEGHSFSLDLEDSGIQISGLRALVGLSNINTYRACIADVVT
LWEQLKQSGEESLLQRAVSKFKIHPLKASQVCHIEHLAKLVNVHMQKRFPNSSSQSDPIL
AEGVPAVTGLHRLELELGPDKGSKALPKLWELLPGLHNLEHLDLENSKIGDRGAENLADA
LVSLRLLEVLNLSQNCIGDKGMKKLAITLRDLPKLHCLSLYSNMISDEGAKSLAAVLPYM
ASLTDLDVKYNELTDVGAESLGASLKKCKNIKTLRMWNQLIPCRVFERLRKEDNRILWH
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggatccgctcagccaaaactgcactcggcccctatgcaaggtgtgtccagactgtgcc
atcaaccggtgcagccagatcagagtggaacacgccccggcagcgatggacagctccagg
catgactgttgctacagctggttccacgacaaaacaaaagagctgccaagaagtttggcg
ccgcctcgcaccgattgttgggggttgaatgaagggaatttggagcatgtggctggaaga
ctaaccatccctctgtggcagaacttggacagaggacacaaactcctgctgcccctgata
gctcctgtggaaccagtcgggaccaccagccaaagcagagcagcggctaccgacaccgtc
tggagcgttgatgctgaaacagagcttgagtttgctctcgcgccatttggggtgaacatg
gagggcttccccccggatcaaggcggcatcgcaaaagggcccgaatcctctgaaaacccg
aaaatgcctggactgggtcgcgtcttgcatggtgaagagggcgggccggatacagaagtg
ttggagacccatttcagcatgacgccagacaacctgggctggatgagctctggcctggga
agttttggaagtgctgagggatcaccaggtgccaaaatgcaggatgagcaagaaaacctg
cccgcctgccctgaccttgcagatccaggaaccaagatgcaggatgtggatgaagtgcca
aacatgtctctcgaatttggagatttaccagaagatttgtccgaattcttgaatgaacaa
tacattgtcgatccagaagtgctgttaggcgatccactgtggaactacgaagagggcccc
agcaagcccggtgcctcgtcggagccgcacgactctggtagcctccgggagaaccaggaa
gctaaacaagcacacaagactgagaaaagggccaaaccactcaatgggccagagccgcag
cccccctctgatgacaacactccatgtaaaaggcaaagggtaacagacaccgaccaggaa
ttggacctgggtctatcagaccgcctcaccacgcctcccagagtccttcagctgcatcct
cccatgcacctgatcaccatcccagaccctcctctgtatcaggtggtgcatgccctgagt
atctcctctccagttattacaatcccatgctcccctttgacttcgactttcatacttgtt
cctgcctcctcgccaccgaaatcccttcacccttcaccactctcaccagcggacggtaca
gtagcaccggtccaaatgagttcgtccccaccaggatctctgtcagacactgctagcaga
gctgtgtccccctcacacgcttcacccccctcccccataaacgagggtgtaagggtctac
attcttgaagcaaaggcgcacatgagtcagagctgtgaggttatcgagggaggccttacc
ctgagttcgcattacgtcgatgtgcaagtcagccagagggagatcgtctaccgatgtggg
aaaaacaccaataaagttcaggataaggagcttatttttaacggcgatgcccaccggcag
aatagcttgctggatcagagtcagatcttcgacggctcactcggagacaatcccaagcgc
tacatattgctaatgggcgatgctggtatgggaaaaagcaccctgatcaagaagctgtgc
ctcaactggtctaaggatcatttcccgcagttcgattttgtcttcctgctggacgggaaa
atgctggctttaacaaagcccatcttcagcctccagaccctcctgttgaacttctcctcc
tttgctaccgcctgctttgacccagatgcggtttttgctcaggttatggcggcgccaaag
cgggtgctcattattttcgacggctttgccgaggtacgggactttgagacgctgctccag
acacaggaaaaagatctgagcgcgtcgctgcagaaagacagcaaagcgcagacatacacg
ataaaacagctgtttgcaggcatcctccagagggcggtgcttcggggttgcactcttgtg
ctctccacgcgacccagaggtgctgctagccaggttctacgacgcacagacagctatttg
gaggtgtgcggtttctccgtccctgacgtggagacgtacgtgtctcggtacttcaccgat
ccgaccctcagggaatctgccttggagcacttgaaaagccacagatacctgcatctcctc
tgctggaaccccggactttgtcgtctggtgtgctctgttttggaagggtcgaagaacata
agagaattgcccagaaccttgactgagctctgccgccaagtgctggacctgagagtgaaa
ggatgttcgccggctttcaccttcacaccgtcgagtgttaaacctgaaaacactgtggaa
gctaaagaaggctcaagcagctctgaagggtgggtgcaacctgtagacgttcagccccaa
agctcagaaagtgcagcaatagaggagaaagagggggaagaagagaaggcagaggaggca
acaggtgttgaagaaggtgaagaacctcaagagttactgtcccagctgagctgcttggcc
tgggacggagtcaaatcgcacacctccgtcattccagacgggaaatatgtatctcctaga
ctcaaggcatttggcctgaggactgggctgctggattgtcatgatctgaggatgacacac
ctcatctcaagcggggagataaagggaggaggtgggaaggccaaaggacagaagaagacc
aggaagaaagtttgtgaagaaaacgcaacagaaagagaaccagccaaagaacacattctg
ctgtgggccaatccttacctgcagagttacctggcggcgctccatttgtgcctgtcaagg
gtggtttcacatcgcactttcttcaagagcctccctctcctgtcgggcccaaagtcctgc
cggcgctgccaacgggaagtgctggagctcactcagcggttcgcttttggaattttgatg
gaaaagctagagacactcgacgctgaggccagtctcagagacgcgctcgtcgccaaacag
actttattgaccaaacaccttgaggatctgtcacacggcggcctgagtccggctcagctt
ctgcaggcttgccactatgtttatgaagtgagtttgatacgtggcagtccgagcacggat
gggagtgacacagaattaaagcgtcagtcaaagctaccggaggtcctggcgtttcgtggc
gttcccatcgaccctttggatgcctttgttgtgtggcatgttctagaaagagcaggccag
gaaggtcacagtttcagtttggatctggaggattctgggatacagatttcgggactcaga
gccctcgtgggcctcagcaacatcaacacctacagggcctgcattgccgatgtcgtcacc
ctgtgggagcagctgaagcagagcggtgaggagagcctcctacaaagagcagtgtccaaa
ttcaagattcaccctctgaaggcctcccaggtttgtcacatagagcacctggcaaagctg
gtgaacgtgcacatgcagaagaggttcccaaacagcagcagccagtcagatccaatcctg
gctgagggggttccagccgtgacaggcctgcacaggctggagttagagcttggtccagat
aaaggttcaaaggctcttcctaaactgtgggagctcctgccaggtctacataatctagag
cacttagatttagagaacagcaaaataggggacagaggagcggagaatctggccgatgct
ctggtatcacttcgtttactggaggtactcaatttgtctcagaattgcattggagataag
gggatgaagaaactggccatcacactacgagacctccccaagctgcactgtctgagtctc
tacagcaacatgatttctgatgaaggggcaaagagtttagcggctgttctcccctacatg
gcatccctcactgaccttgatgtaaagtacaacgagctaaccgatgttggagcagagagc
ctgggagccagtctgaaaaagtgtaagaacataaagaccctgaggatgtggaaccagctc
attccatgcagagtgtttgagaggctacggaaggaggacaacaggatcctttggcattag
DBGET
integrated database retrieval system
