Takifugu flavidus (sansaifugu): 130514623
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Entry
130514623 CDS
T09160
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130514623 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tfs04054
]
130514623 (dhx58)
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130514623 (dhx58)
Pattern recognition receptors [BR:
tfs04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
130514623 (dhx58)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
130514623
NCBI-ProteinID:
XP_056870270
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All DBs
Position
18:10470587..10474474
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AA seq
681 aa
AA seq
DB search
MADFRLYSYQQEVVRRALLGENIIIWLPTGAGKTRAAVYVAKRHLETTAKAKVVVLVNKI
HLVDQHYTKEFQPHLDRSYRVVPISGDSEERDFFGQVVKDSDVVICTAQILYNAMINTDE
AKHVELSDITLLIIDECHHTKKQAVYNQIMSCYVEKKLNGERALPQVLGLTASLGTGGEK
ILERAVEYALQICANLDSDIVSTKNYLPDLEERVPKPVKTFDIVDERPKDPFGDHLKWMM
QRIHDFMDLPNNITLRECGTQEYEADVVILERHGVKEDNRVWAQCALHLRKYNDALLIND
TLRMLDAYRSLKDFYRSKVDTEIDGTDFFLMGLYRENQAELKHHAGNSRYENPKMSKLES
VLLNQFRPGGESRGILFSKTRKSTHCLCDWVSTSSTLQQAGIKAAILTGAGNGIDTMTHV
KQKDTIRSFRQGDLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQKQASGRARARASQ
YSVIAQKGGREERREHINEYLDKLTGDAIAVIQAMRPQEFRSKIAQMQREAIIKRKLQES
QKAKRRSQHTPASVQLLCRNCFKRVASGSDIRLLDNAHYVNINPDFKKHYKTGVQVFLNR
TFEDWEPGCTISCNNGSCNKAWGSEIKYKKVALLPNLSIESFALETPQGRTTPRRWRDIT
FTVDDFSFEEYCQEHMPDFLD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttagactgtattcctaccagcaggaagtggtccgaagggctctgctggga
gaaaacatcattatttggctgccaaccggcgctggaaagactcgtgctgctgtgtatgtg
gccaagagacacctggagaccactgccaaggcaaaggtggtggtcttagtcaacaagatt
caccttgtagaccagcattacaccaaggagttccagcctcacctggaccggagctacaga
gtggttcccatcagtggggacagcgaggagagggacttcttcgggcaagtggtgaaggac
tcagatgttgtcatctgcacggcgcagatcctgtacaacgccatgataaacacggacgaa
gccaaacacgtggagctctcggatatcacactgctaatcatcgacgagtgtcaccacacc
aagaagcaggctgtctacaaccagataatgagctgctatgtggagaagaagctgaatggg
gagcgagcgctgccccaggttcttggcctgactgcctctctgggtacggggggagaaaag
attctggagagagctgtggaatacgccctacagatttgtgccaacctggactcggacata
gtttccacaaaaaactacctgccggacctggaggagagggtacccaagcccgtcaaaacg
ttcgacatcgtcgacgaaaggcccaaggatccattcggggaccatctgaaatggatgatg
cagaggatccacgacttcatggatctccctaacaacatcacactgagggaatgcggcaca
caggagtacgaagcggacgtggtgattctggagcggcacggagtgaaagaggacaacaga
gtgtgggcgcagtgtgctctccacctccggaagtacaacgatgccttgctcatcaacgac
accctgagaatgctggatgcttaccgctcgctgaaggacttttacagaagcaaagtcgac
acggaaatcgatgggacggatttcttcttgatgggactttaccgcgagaatcaggcggag
ctgaagcaccacgcgggaaattctcgctacgagaaccccaaaatgtccaaactggagagc
gtgctgctgaaccagtttagaccaggcggggagtccagggggatcctcttcagtaaaacc
cggaaaagcacccactgcctttgtgactgggtcagcaccagcagcaccttacagcaggcc
ggcatcaaggcggccatcctgaccggtgctggaaacggcatcgacaccatgacgcacgtg
aaacagaaggacaccatccgcagtttccgtcagggggacctgaacctcctcatctccacc
agcgtggccgaggaaggcctggacatcccagaatgcaacctggtggtgcgctacggcctg
cttacgaatgagatcgcccagaagcaggccagcgggcgcgccagagccagagccagtcag
tattcagtcattgcccagaagggcgggcgtgaagagcgacgcgagcacatcaatgagtat
ctggataagctgacgggagacgccatcgctgtgatccaagcgatgaggccccaggagttt
cgcagcaagatagctcagatgcaaagggaggccatcataaaaaggaaactacaagagagt
cagaaagctaagcggaggagtcagcacacccccgccagtgtccagctcttgtgtcgaaac
tgtttcaagcgggtggcctctgggagcgacatcagacttttggacaatgctcactatgtc
aacatcaatcccgactttaagaaacactacaaaactggtgtgcaagtgtttctcaaccgg
acgtttgaggactgggagcccggctgcacaatcagctgcaataacggcagctgcaataag
gcgtggggatctgagatcaagtacaagaaagttgcactgttgcccaatctatccattgag
agctttgcactggagaccccacagggccgcacgaccccgcggcggtggagggacatcacc
ttcacagtggacgacttcagctttgaagagtactgccaggagcacatgcctgacttcttg
gactga
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