Takifugu flavidus (sansaifugu): 130514703
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Entry
130514703 CDS
T09160
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130514703
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130514703
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130514703
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130514703
NCBI-ProteinID:
XP_056870439
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All DBs
Position
18:complement(3516599..3523025)
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AA seq
637 aa
AA seq
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MRGSYGDRDRDRGRDRGSPRFGSSRGGPPSGRKFGNPGDRLRKKRWDLDELPKFEKNFYS
EHPEVQRMSQSELEEYRRKKEITIRGSGCPKPIIKFHQAHFPQYVMDVLLEQNFKEPTPI
QAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTRELA
QQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQI
NVGALELSANHNILQIVDVCLENEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDDITRR
MRRDGWPAMCIHGDKSQPERDWVLAEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTNKGTAYTFFTPGNVRQARELIRVLEEARQAINPKLLQLADNGRG
GGGGGGRPRFRGGSGSNNPNLMYQDECDRRMRSVGGGGGGTKDGGSSSSYGRDSRTGSSR
ESERSSSSSYRDRREGGRSFGSGSSSYSQYQNNSNGCQYSGTRVGSGAGVGGGGQAPPPA
HPPGPQPLMAQQFNPPQPIMGLMGHTPFQFAPATGRK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagaggctcctacggagacagagatcgagaccgtggccgcgacagagggagtcctcgg
tttgggtccagcagaggaggaccgccatcgggtaggaagtttggaaacccgggggaccgt
ttacgcaagaagagatgggacctggacgaactcccgaaatttgagaagaacttttatagt
gagcacccggaagtgcagaggatgagtcagtctgaattggaggaataccgcaggaaaaag
gaaatcaccatccgaggctcgggctgccccaaacccatcatcaaattccaccaggcgcat
ttcccccaatacgtgatggatgtactgctggaacagaacttcaaggagcccacccccatt
caggcacaaggcttccctctggccctcagcggcagagacatggtgggcattgctcaaact
ggctctgggaagaccttatcgtatctcctgcctgctattgtgcacatcaatcaccagccc
tacctggagcgtggagatggacccatatgcttggttttggcccccacgagagaattggca
caacaggttcagcaggtagcgtatgactacggaaagtcatcccggatcaagagcacctgt
gtgtatggcggagcgccaaaggggcctcaaatccgagatctggagagaggcgtggagatc
tgcatcgccacgccagggcgtctcattgatttcttagaggctgggaagaccaacctgcgg
cgctgcacgtacttagttctggacgaagcagaccgtatgctggacatgggcttcgaacct
cagatacgtaagattgtggaccaaatcaggcctgacagacagacgctgatgtggagcgct
acctggcccaaggaggttcgccagctggcagaggacttcctgaaagactacgtccaaatc
aacgtgggagccctggaactaagcgccaaccacaacatccttcagatagtcgatgtttgc
ctggagaacgagaaggacaacaagctgatccagctgatggaggagatcatggcggagaaa
gagaacaagaccatcatcttcgtggagaccaagaaacgatgtgacgatatcacgcgcagg
atgaggcgcgacgggtggcccgccatgtgcattcatggggacaagagccagccagagaga
gactgggtgttggcagagtttcgtagcggcaaagctcccatcctcatcgctacggacgtg
gcgtcccgtggtttggacgtggaggacgtcaagttcgttatcaattacgactaccccaac
tcgtccgaggactacatccaccgcatcggccgcacggcccgcagcaccaacaaaggcacc
gcctacaccttcttcactccgggcaacgtccgtcaagcccgcgagctgatccgggttctg
gaggaggcccggcaggccatcaatcccaaactgctgcagctggccgacaacggacgcgga
ggaggcggaggagggggtcgccctcgcttccgtggcggctctggctccaacaatcctaac
ctgatgtaccaggatgagtgcgacaggcgaatgcgctccgtcggcggcggcggcggcggc
accaaggacggcggcagcagcagcagctacggccgcgatagccgcacggggagcagccgg
gagagcgagcgctcctcctcctcctcctacagggaccgcagggagggaggacgcagcttc
ggctctgggtccagctcatacagccagtaccaaaataacagcaacggctgtcagtacagc
ggcaccagggtcggatctggagctggggtgggtggagggggccaggccccgcctcctgca
caccctcccggtcctcagcccttgatggcccagcagttcaaccctcctcagcccataatg
ggcctgatgggacacactcccttccagttcgctcctgccacaggcaggaagtga
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