Takifugu flavidus (sansaifugu): 130514720
Help
Entry
130514720 CDS
T09160
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03440
Homologous recombination
tfs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130514720 (top3a)
03460 Fanconi anemia pathway
130514720 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfs03032
]
130514720 (top3a)
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130514720 (top3a)
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
130514720 (top3a)
DNA replication proteins [BR:
tfs03032
]
Eukaryotic type
DNA Topoisomerases
130514720 (top3a)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
130514720 (top3a)
FA (Fanconi anemia) pathway
130514720 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
130514720
NCBI-ProteinID:
XP_056870464
LinkDB
All DBs
Position
18:complement(3872385..3882184)
Genome browser
AA seq
1008 aa
AA seq
DB search
MLVHLLRRSVLGSGILGIGVKRRCSCALSSVGCPDKAQPADMIRNRAQIKRVLCVAEKND
AAKGISDIMSNGRFRRREGMSKFNKIYEYEYHLFGQNVTVLMTSVSGHLLGLEFKTPFQK
WHSCSPVLLFDAEVEKYCPENMVQIKRTLEKEVKQCQLLIIWTDCDREGENIGFEIIDVC
KAVKPNIQVLRAKFSEITPNSIRRACDTLSEPDSKVSDAVDVRQELDLRIGASFTRFQTL
RLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQSFIPETFYKIKVLHEVEEDTVEFS
WKRNRLFNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVEMEKLASRKLRISA
KETMKIAEKLYTQGFISYPRTETNIFPPNLALGPLVEEQTQSSVWGAFAQRVLEQPGGPN
PRQGKKSDQAHPPIHPTKHSGSLQGNEGRLYEFIVRHFLACVSQDALGQETVVDVDIAQE
KFSTSGLMITARNYLDVYPYDRWTTKLIPVYEQGSQFQPTAIEMVDGQTSPPQLLTEADL
IALMEKHGIGTDATHAEHIETIKSRMYVGLTSDQRFLPGELGMGLVEGYNSMGYEMSKPN
LRAELEADLKLVSEGRKDKWSVLQHHIQKYKTVFIESVHKAKKLDEALSPYLGAAQEIPE
EQQQDMEIPLPIRKCPHCGRDMVLKKKREGNGKYLTCVGYPACKTAVWFPDMVLEVSRDQ
SICPTCRPAPVHMLKLKFRRGSLPPMMPLEFVGCIGGCDETLREVLDLKYLRAGGSGGSG
GGRGDGPHPPAPPPPRAPSSNARPSLPPVPTVVPQPQPPLRALSVSASSDSNAIVCNCGQ
QALLLTVRKDGPNQGRQFYKCNGGTCGFFLWADEPGQQGASQSWGAPLQVSQPPRATVNS
ANAGRTMCHCNETAVTRTVQKDGPNKGRMFHTCGKSREQQCGFFQWADENAPPSGAFDGG
YNGGGNGGRQARRITGAATADKPPAAKRPRTCGICHTPGHTRATCPQR
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgcacctgctcagaagatctgtcttgggatcgggaatactgggaattggggtc
aaacggaggtgttcctgtgcgctgtcgagcgtcgggtgtccagacaaagcgcaaccggcg
gacatgatccggaaccgagcccagatcaaacgggtcctctgtgtggcggagaagaacgat
gcagccaaaggcatttcagatatcatgtccaatggcagattcaggaggagagaagggatg
tcaaagtttaataagatctacgagtacgaataccatctctttggtcagaatgtgacagtc
ctaatgacatcagtgtcaggccacctactagggctggagttcaaaacaccctttcagaaa
tggcacagctgcagtcctgttcttttatttgacgcagaggtagagaagtattgtccagaa
aacatggtacaaatcaagcggacgcttgagaaagaggtgaagcagtgtcagctgttaatc
atctggaccgactgtgacagagagggggaaaatattggctttgaaatcatagatgtctgc
aaagcagttaagcccaacatacaggtccttcgtgcaaagttttctgaaatcacccccaac
tctattcggagagcttgtgacactctatcagagccagattctaaagtcagtgatgctgtc
gatgttcgtcaggagctggacttgaggataggtgcgtcttttactcgattccagacactc
cgcctgcagaagatctttccagagtctctggccaatcaactgatctcctatggcagctgt
cagtttcctactttgggtttcgtggtggagcgctttaaagccatccagtctttcatacct
gagacattctataagattaaagtgcttcatgaggtagaggaggacactgttgaatttagt
tggaaaagaaatcgtctcttcaaccacacagcttgcctggtgctctaccagatttgcatg
gaggatcccatagcaacagtcacctcagtaaccagcaaaccaaagagcaaatggagaccg
ctgccgttggacaccgtggagatggaaaaactggcatctcgtaagctgagaataagtgcc
aaagagaccatgaaaattgcagaaaaactctatacgcaaggcttcatcagctaccctcgt
actgagaccaacattttccccccgaacctggccctcggacccctggtggaggagcagaca
caaagctccgtatggggggcatttgcacagagggtactagagcagcctgggggccccaac
ccacgacagggcaaaaaatctgaccaagcccatccccccatacaccccaccaagcacagc
ggttcattacaaggcaatgaagggcgtttgtacgagtttattgtgcggcacttcctggcc
tgtgtatcccaggatgctttggggcaggaaacggtggtggacgtagacatcgcccaggag
aaattttcaacatcaggactcatgatcaccgcaaggaactaccttgatgtttacccgtat
gacagatggactacaaagctgattccagtgtacgagcaaggctcccagttccagcccaca
gctatcgagatggtggatggacagacgagtcctccgcagctgcttactgaagctgacctg
atagcattaatggagaagcacggcatcggcacggatgcaacccatgcagagcacattgag
accatcaagagtcgaatgtatgtaggcttgacatctgaccagagattcctacctggagaa
ctgggcatggggctcgtggaaggttacaactccatgggttatgagatgtccaagcctaac
ttgcgggctgagctggaggcagacctgaagcttgtgtctgagggcaggaaggacaaatgg
agcgtgctgcagcaccacatccagaaatacaagactgtcttcatcgagtcggtccacaag
gcaaagaagttagatgaagcgctgtcaccctatctgggcgcagctcaggagatcccagag
gaacaacagcaggacatggagatccccctgcccatcaggaagtgtccccactgtgggcgg
gacatggtcctgaagaagaaaagggaaggaaatggtaaatatctaacctgtgtgggctac
ccagcctgcaagaccgctgtttggttccctgacatggtgctggaggtcagcagagaccag
tccatctgtcccacctgtcggccagctcctgttcacatgttgaaactcaagttccgtcga
ggaagcctccctcccatgatgcctttagagtttgttggctgcatcggtggatgtgatgag
acgctcagagaggtgctggacctgaaatacctcagagcagggggatctggagggagcggc
ggagggagaggagatgggcctcatccaccagctccaccaccaccaagagccccaagttcc
aacgctcgcccttccctgccccctgtccccaccgtggtgccgcagccacaacctccgctg
cgagctctcagcgtcagcgccagctccgacagtaacgccatcgtgtgtaactgtgggcag
caggcgctcctcttgaccgtgcgcaaagatggtccaaaccaaggacgccagttctacaaa
tgcaatggcgggacgtgcggtttcttcctgtgggccgatgagccaggtcagcagggggca
tcgcagagctggggcgcacctctgcaggtctcccagcctcccagggccacagtcaactct
gcaaacgcaggacgaaccatgtgtcactgtaatgagacagcagtgacgcgcacggtgcag
aaggatggtcccaacaaaggaaggatgttccacacctgcgggaaatcaagagagcagcag
tgtggcttcttccagtgggcggatgaaaacgcacctccctcaggtgcctttgatggcgga
tataacggcggcggaaacggggggagacaggcgagaagaataacaggagctgccaccgcc
gacaaaccccccgctgccaagaggccgcgcacgtgtggcatctgccacaccccaggacac
actcgtgccacctgcccccagcgatga
DBGET
integrated database retrieval system
