Takifugu flavidus (sansaifugu): 130514746
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Entry
130514746 CDS
T09160
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04010
MAPK signaling pathway
tfs04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130514746 (cacna1ha)
04020 Calcium signaling pathway
130514746 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130514746 (cacna1ha)
Ion channels [BR:
tfs04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130514746 (cacna1ha)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
130514746
NCBI-ProteinID:
XP_056870497
LinkDB
All DBs
Position
18:4983598..5043219
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AA seq
2006 aa
AA seq
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MTDGEGRARFQYAECPEGQEREEVYEEVRLAAPTAHRKDLPGLDVDPGGGRDEEENEMEA
GRPRGDSSPGRDGDWSPEVGEDDDQEPELEVEVGPTLGVRITAPIRDPDCVSEEEEQQPY
PALAPVAFFCFKQTMRPRNWCLRVVCNPWFEHISMLVILLNCVTLGMFQPCEDISCLSDW
CRILQVLDDCIFAFFAVEMVIKMVALGIFGSNCYLGDKWNQLDFVIVMAGVMEYSLDGHN
ASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLW
AGLLRNRCFLDDGIRTTYNLSISPYYVTEEDSPFICSAPRENGMLRCHDVPAYAEGGVEC
SAAVGTASVNGCVNWNQYYNVCQPGDHNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMY
YVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENALMREQRARYMSNDS
TLASYSEPGSCYEEMLRYISHLYRKLRRRLQRIYAGWHSKRRKKVNPNGSGGGGNNGGNG
HGHSSSRGCGSLGPGNALWLRPIHNLLQHHQHQHCRLSNGGQHAVAVSAEDVDGGIRGGE
ELEMSSLPVRRGSTNGNRDNGRNAAVATQGVGTLLGRLNGGMNYPTILPSFVCSHSSKTP
PPHSQQCQASPEQHPVSHPSDHSETLNKLYQLMGQHRRRRLLFQLAGVVPSPLLLELLSC
PLCARSLETLELELGDLEGGRGEADGLHDFPQGGDLRGRRGRGRRQGVLEYRNGVVRAWV
GFREKLKRIVESKYFNRGIMIAILVNTLSMGIEYHEQPEELTDVLEISNIVFTSMFVLEM
GFMLLAFGLFGYIRNPYNIFDSIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFLPA
LRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFSFRTESGDTIPDRKNFDSL
LWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQA
EGDANRSESDDEKKSNNSEEDEKVEQFRDTELKMYSLMMTANGHIDPHGTVAPPIIMRTA
ATPMPTPKSSLGPESMLGDDLMYRDGVTGEVGLGVSEAGIARAESRRGSSTSMEPLAYDQ
RSLALSSPGRRSPLPPRSWGSRRSSWNSLGRAPSLKRRDTSGERESLLSGEGGEEDSGEH
VAEVAANNRLWPEPLELLQASTLCPAMVAESGDCNGRTLTYDPNINPDTKDDSSPEEDMD
DDSSLCYWIKKELHNLKPRWCKEHEDWTLYLFSPESQCRAWCQSVISHKLFDHVVLVFIF
LNCITIALERPDIQPHSTERVFLSVSNYVFTVIFMAEMAVKVVALGFCFGTQTYLQSSWN
VLDGLLVFVSLVDILVSLAYTGGNRILGILRVLRLLRTLRPLRVISRAPGLKLVVETLIT
SLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLDTKNITNKSDCFQANYRWIRRKY
NFDNLIQALMTLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLLYFISFLLIVSFF
VLNMFVGVVVENFHKCRQDQEEEEARLREEKRLKMIEKKRRSKENGGAEAKQRPYYADYS
PLRLSIHTLCTSHYLDLFITIIICINVFTMSIEHYNQPQYLEEVLKYCNYVFTFIFVIEA
LLKLVAFGIQRFFKDRWNQLDIGIVALSIMGITLEELKLSAALPINPTIIRIMRVLRIAR
VLKLLKMAKGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECNDNNPCEG
LSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECRPEDRHCLTYLPWVSPIYFVTFV
LMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIALEMAMEQQQRRSSMASSHSSVEG
TYVGPCPHSPGQEEELHCIDRDQLSPRKMSVSRMHSLPNDSYMFRPVRPASAPYPLEEVE
HSPQHQHSVHKYKAKRFSDLRALPAV
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagcgcgctttcagtatgcagagtgcccggaggggcaggag
cgtgaggaagtgtacgaggaggtgaggctagctgcacccacggcccacaggaaggacctt
ccgggtctcgacgtggaccccggaggaggtcgggatgaggaggaaaatgagatggaggcg
ggaaggccgaggggggacagtagtccaggtcgggatggagactggagccccgaggtcggg
gaggacgacgaccaggaaccggagctggaagtggaagttggaccgacattgggagttcgc
atcacggcgcctattcgtgacccggactgcgtgtcagaggaggaggagcagcagccgtat
cccgccttggcccccgtggccttcttctgctttaagcaaactatgaggcctcgcaactgg
tgtcttcgtgtcgtctgtaacccgtggttcgagcacatatccatgctggtgatcctgctc
aactgtgtgactctgggaatgttccagccttgtgaggacatcagctgcctgtcagattgg
tgccgcatcctgcaggtcttggacgactgtatctttgctttcttcgctgtggaaatggtc
atcaagatggtggcactggggattttcggctcgaattgttaccttggcgacaagtggaac
cagcttgattttgtcattgtcatggccggggtgatggagtattctctggatggacacaat
gccagcctgtcagccatccgtactgtccgagtgctcaggccgctgcgggccatcaacaga
gtaccaagcatgcggatcttggtgacgctgctgttggacaccctgcccatgctgggaaac
gtcctcctcctctgcttctttgtctttttcatctttggcatcgtgggagtccagctgtgg
gcggggctactgcgcaaccgctgcttcctggacgacggtatcagaacaacatacaacctg
tccatcagtccatactacgtgactgaggaagacagcccgttcatctgctcggctccccga
gagaacggcatgcttcgctgccacgacgtgccggcctacgccgagggtggggttgaatgc
tccgccgcggtcggcacggccagcgttaacggctgcgttaactggaaccagtactacaac
gtgtgtcagccaggggaccacaaccctcacaagggagccgtcaatttcgacaacatcggc
tacgcctggatagccatattccaggtcatcactctggaaggatgggtagacatcatgtac
tacgtcatggacgctcactccttctacaattttatatattttatattgctcattattgtg
ggctctttcttcatgatcaacttgtgcctcgtggtcatcgccacccagttctctgagacg
aagcagagggagaacgccctgatgagggagcagcgcgctcgctacatgtccaacgactcc
acgctggccagctacagtgagccggggtcgtgttacgaggagatgctgcgatacatcagc
cacctttatcgaaagctgaggcgcaggctgcagaggatatacgctgggtggcacagcaaa
cggcgtaaaaaggtgaatcccaatggcagcggtggcgggggtaataacgggggtaatgga
cacggccacagttccagcaggggctgtgggagtttaggcccgggtaacgccctgtggctg
aggcccatccacaacctgctgcagcaccatcagcaccagcactgccggctcagcaacggg
gggcagcacgccgtcgccgtgagcgccgaggatgtcgacgggggcatcagaggaggggag
gagctggagatgagttcgctgcccgttcggagaggaagcacaaacgggaacagagacaac
ggcaggaacgcggccgtggcgacacagggggtggggactctgctggggcggctgaacggg
ggcatgaactaccccaccatcctgccatcatttgtgtgcagccacagcagcaagactcca
cccccacattcccagcagtgccaggccagtccggagcaacacccagtcagccacccgtcg
gaccattcagagaccctgaacaagctctaccagctcatgggccagcacaggcgccggcgg
ctgctgttccagttggcaggcgtggtgccgagccctctcctcttggagctgctcagctgc
cctctgtgcgcccgcagcctagagaccctggagctggagctgggagacctagagggaggc
aggggagaggctgacggactgcatgactttccccagggcggcgatctgagaggcaggcga
ggacgcggcagacggcagggcgtcctggaatacaggaacggggtggttagggcctgggtc
ggcttcagagagaagctgaagaggattgtggagagtaaatactttaaccgggggatcatg
atcgccatcctcgtcaatacgctcagcatggggattgaataccacgagcagcccgaggag
ctgactgacgtcctggagattagcaacatcgtattcaccagcatgttcgtcctggagatg
gggttcatgctgctcgccttcggcttgttcggatacatcaggaacccctacaacatattt
gacagcataattgtcatcatcagcgtgtgggagatcatcggccagtcggacggagggctg
tcagtcctgcggacgttccggctgctgcgggtgctgaagctggtccgcttcctgccggcc
ttgaggagacagctcgtcgtgctgatgaagacgatggacaacgtggccacattctgcatg
ctgctgatgctcttcatcttcaccttcagtatccttggaatgcatctgtttggctgtaaa
ttcagcttccggacggagagcggcgacaccatccctgaccgcaaaaacttcgactctctc
ctttgggccattgttaccgtctttcagattctcacacaggaggactggaatgtggttctg
tacaatggcatggcgtccacctctccatgggcagcgctctactttgttgctcttatgact
ttcggcaactacgtcctcttcaatctgcttgtggccatcttggtggagggatttcaggcc
gagggtgatgctaatcgctcagagtctgacgatgaaaagaaatccaacaactccgaggag
gacgagaaggtcgaacaattccgagacactgagctgaaaatgtactccctgatgatgacc
gccaacggtcacattgatcctcacggaacagtggctccgcccatcatcatgcgcaccgcg
gccacacccatgcccacgccaaagagctccctgggacccgagtccatgctgggagatgac
ctcatgtacagagacggggtgaccggcgaggtgggactgggcgtttctgaagcagggatc
gctcgtgcagaatctcgacgggggagctccacctccatggagccgttagcttatgaccag
cgttctttagccctctccagtcccggccggcgctccccgctgcctccccgctcgtggggg
agccgccgctccagctggaacagcctggggagagcgccgagcctcaagcggcgagacacc
agtggggagagggagagcctcttatccggggaagggggagaggaggacagcggcgagcac
gtggcggaggtggcggccaacaacagactctggccggagcccctggagctgctgcaggcg
tccactctgtgtcccgccatggtcgcagagtccggtgactgtaacggcaggacgctgacc
tacgaccccaacatcaacccagacaccaaagatgactcctcaccggaggaagacatggac
gatgacagttctttgtgttactggatcaaaaaggagctgcacaacttaaagccccgctgg
tgcaaagaacacgaagactggactctgtatttattttccccagagagccaatgccgtgcg
tggtgccaaagcgtgatctctcacaaactgttcgaccacgtggttctggtcttcatcttc
ctcaactgcatcaccatcgccctggaaagaccagacatccagccccacagcacagagcga
gtgtttctgagtgtgtcaaactacgttttcactgtgatcttcatggcagaaatggcagtc
aaggttgtagctctgggcttctgctttgggacgcagacctacctccagtccagctggaac
gttctagatggtttgttggtgtttgtgtctctggtggacatactggtttctctggcctac
accggtgggaaccggatcctgggcatcctcagagtcctccgtctactgcgcacactacgc
ccactcagggtgatcagccgcgcccctggactgaagctggtggtggagacactcatcacc
tctctgaggcccatcgggaacatcgtcctcatctgctgcgcgttctttatcgtctttggc
attttgggagtgcagctgttcaaagggaagttctaccactgtgagggcctggacactaaa
aacatcaccaacaaatccgactgcttccaggccaactaccgctggatacggaggaagtac
aactttgacaacctgattcaggctttgatgacactgttcgtgttatcctgcaaagacggc
tgggtcaacatcatgtatgatgggctggatgcggtgggggtggatcagcagcccgtgagg
aaccacaacccctggatgctgctctacttcatctccttcctgctcatcgtcagcttcttc
gtcctcaacatgttcgtcggcgtcgtcgtggagaacttccacaagtgccggcaggaccag
gaggaagaagaggcccgcctgcgggaggagaagaggctgaagatgatagagaaaaagcgc
aggagtaaggagaatggaggggctgaggccaagcagaggccctactacgccgactactcc
ccactgcgcctctccatccacaccctgtgcaccagccactacctggacctcttcatcacc
atcatcatatgcatcaacgtcttcaccatgagcatcgagcactacaatcagccacagtat
ttagaggaggttctgaagtactgtaactacgtcttcacgttcatcttcgtcatcgaggcc
ctgctcaagcttgtggctttcggcatacagaggttcttcaaggacaggtggaatcagctg
gatatcggtatagtagcgctgtccatcatggggatcaccctggaggagctgaagctgagc
gcagcgctgcccatcaatcctaccatcatcagaatcatgagagttctacgaatagcacga
gtcctgaagcttctgaagatggccaaggggatgagagctctcctggacaccgtcatgcaa
gcgctgccgcaggtgggaaatctcggtcttctcttcatgctgctcttcttcatctacgcc
gcgttgggagtggagctctttggcaaactagagtgcaatgacaacaacccgtgtgagggt
ctgagtcgtcacgcgacctttgagaattttgggatggccttcctcaccctgttccgggtg
tccaccggggacaactggaatggaatcatgaaagacacgttaagggagtgtcgtccagag
gacagacattgtctcacatacctgccctgggtgtctccaatttactttgtcacctttgtg
ctgatggcccagtttgtgctggtgaacgttgtcgtggctgttctgatgaagcaccttgag
gaaagcaacaaggaggccaaagaggacgcggagatggatgcggagatcgccttggaaatg
gccatggagcagcagcagcgcaggtcaagcatggcatccagccacagttccgtggaaggg
acttatgtcggaccgtgtccacattcaccaggacaggaggaggagctgcattgcattgac
agggaccagctgtctccgaggaagatgtccgtctccaggatgcactccctgcccaacgac
agctatatgttccgacctgtgcggcccgccagcgccccctatcctttggaagaggtagag
cacagtcctcagcaccagcattcagttcacaaatacaaagccaaaaggttcagtgacctc
cgtgcactcccagccgtgtga
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