Takifugu flavidus (sansaifugu): 130514833
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Entry
130514833 CDS
T09160
Symbol
pecam1a
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04148
Efferocytosis
tfs04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130514833 (pecam1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130514833 (pecam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tfs04090
]
130514833 (pecam1a)
00536 Glycosaminoglycan binding proteins [BR:
tfs00536
]
130514833 (pecam1a)
04091 Lectins [BR:
tfs04091
]
130514833 (pecam1a)
CD molecules [BR:
tfs04090
]
Proteins
130514833 (pecam1a)
Glycosaminoglycan binding proteins [BR:
tfs00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
130514833 (pecam1a)
Lectins [BR:
tfs04091
]
I-type lectins (Siglecs)
130514833 (pecam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
Ig_C17orf99
ig
I-set
V-set
C2-set
Ig_4
V-set_CD47
Psg1
Motif
Other DBs
NCBI-GeneID:
130514833
NCBI-ProteinID:
XP_056870615
LinkDB
All DBs
Position
18:complement(4709600..4716259)
Genome browser
AA seq
790 aa
AA seq
DB search
MNLRSSNLPLLLLTGLLHFGPISRGQASYIIDTVDLGILPSTTVPSGTPVNIVCKVNVIY
DITQNLNHTFQISRHDAIIYTFTTKEDMLTYKLNPARAADSGSYQCRVTVKEKSKSSFSQ
KLVVTGLQTPTLYINNTQPYESEEFTAVCSAPEEKGALIFRIYQRFANGESEIIKQLAPS
VNSSETTLVLRPVGDRVLYCDYEINLVSGPRRSNHSKEISLLVKGLQIAPIMNVLPSSNV
SEGDVVEVVCKVVSDLKNVEVYLTMDKRILKQAPISLNHRFTATVENSGELVCKAVWGNV
QKETYQTITVNELFSKPTLTVKPTDIFEGDIFNFSCSISKYDPQRINKATLKLSYYKDNV
IITTSQVYSSRAHPSQNGNYTCKVQAQYLTNSFVKESQIVVLKAKVRISQPVLSVVGGTL
VLGKDFQVLCHSDNGSLPITYSLSRPNKPVETRMVSNPGEQAIFNVTALSKDIDIKHMSC
QARNSQHKPAMAQTLHYTKLIGILFAEPVSKPVLKIVPNMGDVTEGQDVTLVCSVQRGTV
PILFTWHHTKEGPIANHTSDKLEASYKITKVRAEQRGAYYCVCTNPASETKQSQRVTIGV
KMAGWKKGLIAAFCILLLVALLLVFIFKKHLLWFKKKATNELSVKSAGTKVERLSLTQAE
VSEATNVTPGILGKSVWSEHVSGSESDDQHSVTSPEQPEPQYTEVQIRKVNPDRAPVERA
TDTVYSEVRTSKQAAPEEADGFEGSVEYAELNHDCDQQGDHGDHTVPAEHSVDNNMSDHR
ECDHDTAPDC
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttagatcctccaacctgccgctgctgctcctgaccggcctcctacactttggt
cctatcagcagaggacaagcatcatacattatcgataccgtcgaccttgggatcttaccc
agcacaaccgttccgagcgggacgccggtgaacatcgtatgcaaggtcaacgtcatctat
gacatcacccagaacctcaaccacaccttccagatcagccggcacgatgccattatctat
acctttaccaccaaggaggacatgctcacgtacaaactcaaccctgccagggcggctgat
tctggaagttaccaatgtagagtcacggtgaaggaaaagagcaaatccagcttcagccag
aaactcgtcgtcacaggtttgcagacccctactctatatataaataacactcaaccctat
gaaagcgaagagttcacggctgtgtgcagcgccccagaggaaaaaggagccctcatcttc
cgcatttaccaaagatttgcaaacggagaatctgaaataataaagcaactggccccaagt
gtgaattcttctgagaccacactggtcctgaggcctgtgggagaccgcgtgctgtactgt
gactatgagatcaatctggtttcagggcccagacgttccaaccacagcaaggagatctca
ttgctagtcaaaggacttcagatcgctcccatcatgaacgtcttgccgtcttcaaatgtg
tctgagggtgacgtcgtggaggtggtttgtaaagtggtgagtgatctgaagaacgttgag
gtctacctaacgatggacaagaggatcctcaagcaggcacccataagcctcaatcataga
ttcactgcgactgtggagaactccggggagctggtgtgcaaagcagtgtggggaaatgtg
cagaaagaaacatatcagaccatcacagtcaacgagctgttctcaaagccaacgttgacc
gtcaaacccacagacatattcgagggggacattttcaacttttcctgctccatctccaag
tatgatccccagaggatcaacaaagccaccttaaagttatcctactacaaagacaacgtg
atcatcaccacctcacaggtgtacagcagcagggcacacccatcacaaaatggcaactac
acctgtaaggtgcaggcccagtacctcacgaatagttttgtgaaagaaagccagatagtt
gtcctcaaagcaaaagttaggatttcacagcctgtcctgagtgtggtgggggggacgttg
gtgttgggaaaggacttccaggttctctgtcatagtgacaacggctccctgccaattacc
tatagcctgtccaggcccaacaaaccggttgagacccggatggtgtccaatccaggagaa
caggccatcttcaacgtgacagccctttccaaggatatagacattaaacacatgagctgc
caagcccgaaacagccagcacaagccggccatggcgcaaactctgcattacaccaaatta
ataggaattttgtttgcagaacctgtgtcgaagccggtgttgaaaatcgtgcccaacatg
ggggacgtcaccgaggggcaggacgtgacgctggtgtgctcggtgcaaagaggcacggtg
cccatcctcttcacctggcaccacactaaagagggccccattgccaaccacacctctgac
aaactggaggcgtcctacaagatcacaaaggtgcgagcggagcaacgaggagcgtactat
tgcgtgtgcaccaacccggccagtgaaaccaagcagagtcagagggtcactatcggagtg
aaaatggcaggatggaagaaaggtctcatagcggccttctgtatcctgctcttagtggca
ttactcctagttttcatctttaaaaagcatcttctctggttcaagaagaaggccacaaac
gagctgtcagtgaagtcggcaggcaccaaagttgagcgtctgagcctcacccaggccgag
gtcagcgaggccaccaatgtcacaccaggaattttggggaaaagtgtttggagcgaacac
gtctcaggttctgagtccgatgaccagcacagtgtgacctctccagaacagccagaacct
caatacaccgaggtccagatcagaaaggtcaatcctgacagagctccggtggaaagagcg
acggacacggtgtacagcgaggtgcggacctctaagcaagctgctccagaggaggctgat
ggttttgaagggtcagtggagtacgcggagctgaatcatgactgtgatcaacagggcgac
catggcgaccacacagttccggctgaacacagtgttgacaacaatatgagcgaccacagg
gaatgtgatcatgacacggcaccggactgctaa
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