Takifugu flavidus (sansaifugu): 130514845
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Entry
130514845 CDS
T09160
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130514845 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfs03021
]
130514845 (cpsf4)
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130514845 (cpsf4)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130514845 (cpsf4)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130514845 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
130514845
NCBI-ProteinID:
XP_056870641
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All DBs
Position
18:3899711..3902624
Genome browser
AA seq
263 aa
AA seq
DB search
MQDILANVDHIKFDLEIAVQQQLGAQPLPFPGMDKSGSAVCEFFMRAACMKGAMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGRSCKFMHPRFELPMGASEQPP
LPLQSQNQSKSASAMGRSSMSLIQLTNSSPGMNNTQMMPTQQNNMSTNRGPRPLDQVTCF
KCGDRGHYANKCTKGHLAFLSGQ
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacatactagctaacgtggatcacatcaagtttgacttggaaatagctgtgcaa
caacagcttggagcacagcctctgcctttccccggcatggacaaatctggatcggctgtg
tgcgagttcttcatgagagcagcgtgtatgaaaggtgccatgtgtccctttcgccacatt
agtggcgagaagacggtggtgtgtaagcactggctccgaggactctgcaaaaagggagac
cagtgcgagtttctccacgaatatgacatgaccaagatgccggaatgctacttctactcc
aaatttggcgagtgcagcaacaaggaatgtccattcctgcacatcgatccagagtccaaa
atcaaagattgtccgtggtatgaccgaggcttctgcaaacatggtcctgactgtagacac
agacatacaagaagggtgatttgtgtcaactatctggtaggcttctgtccagaagggaga
tcctgtaaatttatgcatcctcgttttgagttgcctatgggagcttctgaacagcctccg
ctgcccctgcaaagccaaaaccagtcaaagtctgcatctgccatgggccgttcatcgatg
tctctaattcagctaaccaactccagtccgggcatgaacaacactcagatgatgcctact
cagcaaaataacatgagcaccaacagagggccacgacctttggaccaggtcacctgcttc
aagtgtggagaccggggccactatgccaacaaatgcactaaaggccaccttgccttcctg
agcggacagtga
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integrated database retrieval system
