KEGG   Takifugu flavidus (sansaifugu): 130514864
Entry
130514864         CDS       T09160                                 
Symbol
alyref
Name
(RefSeq) THO complex subunit 4 isoform X1
  KO
K12881  THO complex subunit 4
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs03013  Nucleocytoplasmic transport
tfs03015  mRNA surveillance pathway
tfs03040  Spliceosome
tfs05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130514864 (alyref)
  09122 Translation
   03013 Nucleocytoplasmic transport
    130514864 (alyref)
   03015 mRNA surveillance pathway
    130514864 (alyref)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    130514864 (alyref)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfs03019]
    130514864 (alyref)
   03041 Spliceosome [BR:tfs03041]
    130514864 (alyref)
Messenger RNA biogenesis [BR:tfs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     130514864 (alyref)
    TREX complex
     130514864 (alyref)
Spliceosome [BR:tfs03041]
 Complex C
  Other components
   EJC/TREX
    130514864 (alyref)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    130514864 (alyref)
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 130514864
NCBI-ProteinID: XP_056870675
LinkDB
Position
18:complement(4692134..4694981)
AA seq 265 aa
MTDKLDMSLDDIIKQNRQQRGGGRGGRGRGRGVSGRGGGVGRLGGGGGGFGNRGGGSGPM
RNRQNLNRGRGRPTPYSRPKQLPDKWQHDMFDNGFSGFNGVASGGGAGVETGGKLLVSNL
DFGVSDADIQELFAEFGILKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGIPLDG
RPMNIQLVTSQIDTQRRPMQGRGGGPMNRIRGGGFGGMQKTRGMRGAGGSRGRGRGGRGG
GSKQPLSAEELDAQLDAYNARMDTS
NT seq 798 nt   +upstreamnt  +downstreamnt
atgacagataaactggatatgtccttagacgacattatcaagcagaacaggcagcagaga
ggtggaggccggggaggaagaggccgaggccgcggcgtctcaggccgcggcggaggtgtt
gggcgtctcggaggtggcggcggaggatttggaaaccgaggcggcggatccggccccatg
aggaaccgacaaaacctgaaccgcggtagaggcagaccgacgccttacagcaggcccaaa
cagcttcccgacaaatggcagcacgacatgtttgacaatggcttcagtggattcaacggc
gttgccagtggcggaggagccggtgtggaaactggagggaagctcctcgtctccaatcta
gacttcggcgtctcggatgcagatattcaggaactctttgctgaatttggaattctaaag
aaggccgctgttcactacgatcggtcggggagaagcctcggaactgcagatgttcacttt
gaaaggagagcagacgccctcaaggccatgaaacagtacaacggcatcccacttgatggg
cggcctatgaacatacagctcgtcacatcacagatcgacacacagcggcgacccatgcag
ggtagaggcggtggacctatgaacagaattcgtggaggcggctttgggggcatgcagaaa
acccgtgggatgcgcggcgccggcggttccaggggaaggggtcgaggtggtcgaggaggg
ggcagcaaacagccgctttcagcagaagaactcgatgctcagttagatgcctacaatgca
agaatggacaccagctaa

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