Takifugu flavidus (sansaifugu): 130514869
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Entry
130514869 CDS
T09160
Name
(RefSeq) LOW QUALITY PROTEIN: C-myc promoter-binding protein-like
KO
K20163
DENN domain-containing protein 4
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130514869
Membrane trafficking [BR:
tfs04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130514869
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
130514869
NCBI-ProteinID:
XP_056870685
LinkDB
All DBs
Position
2:10413088..10441859
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AA seq
2010 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKTAKPKAPITDVAVVIRSLGEEVP
PGYCGIEETPSGHSADLNNGGLMAPQIFLCYRRGRDKPPLTDLGVLYEWKERLKQGCHLI
QTTPSGRPANISGNSSQRIYITYRRAAESQPHSALAVTDICIIIPSKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPQSVPLFCLPMGATI
ECWXSKPKYSLPVFSTFVLTGASGEKVYGAAIQFYETFPPECLNDQQRSQLSLPNPDPCR
SSSSCSASTAADSNSAATQCSVYTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHVQPI
EKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLENLGPENA
VTMLVLAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCP
FIVGVDSRYFDLYDPPPDVTCVDLDTNTIFHNEDKRALTWKILPKKACKNLMNVLSNLHQ
QLLHGQNGPDGLLELNICDTSELSCGKSLHTLELEIQEAFLRFMAAILKGYRSFLRPITQ
APSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFD
DCVDKLYSSERSADRGGKVDGDRPEETRLIEIDESQRSEHTVFITPPELPPLPEGEEYPL
CYRYDGFPVLSLDLFDPVEGLQTPSSRLAARHSCPTSPAPMFRRTKQEIKSAQKIAKKYS
SIPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEVCYR
VLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWMKL
RNVVLGVAQFKRALRRHAPLTQSPLSDGSDLDAVSHGSLDSSADTNATVEQGPFAATPAK
VDPTDDRSSTASRGGSKVGAHSLCGGSELRGATLHPGDQSDLGYNSLSKEEVRRGEPGPQ
ESIQDKDDKKESDCSSLSETESSRGSKDCLPQLDADASSSFKPRGIVRSSFPYDDSSCRP
KSSASAGHVAGLLFTSSLDEIGEVRTSSLLRRHKSALEEVVGGSSNAAYKWQGLRGRRLS
DDPVGCSAATVLGLGLTQGETDPGKIAGHLGADVKILSDTSFSKKKKPRSLCLGGSERAV
VNAGASRFHGHQEEEEETEGQDSSDEDRANPEAIFDLEDLDLEKPTSAVGSSLQKTNTSR
RKLMEHSGGYSNIENAKGAVKRTDIETGYDPLSLLAAEQQTEAQCSEDNDVGAPSTRRHL
AREIELYMNHMGSPLSSRTPSLDLQDPSSPPLLHPSSISAPRRASLPDSSPHRTAGVPRS
RTFHPQSPSQTPSRQRLWSSPSCRSSSTTATPSPSPRPSPNRERDNRMGLVSPSPSSSSF
TLDNLLTPSLDVFKTSMFSAGKGVAEKASRWYSRLATYTTPTKDGHSDRLSVSSLSVGDL
DCPSALGEDGYREQEGAAVSPQKNGPRRSPRRSPLHKLENPTQCSSFGRPTSLLPGGVLT
PPGSPLPDKSDLSSSRYTSNTSIFNNYGMELLISSCSRCKTCDCLVYDEEIMAGWTADDS
NLNTTCPFCGNPFLPFLNVEIRDLRGPGRLFLKGSPSVDEAVTSSCSASTGLDTGTSSLS
TPCPTTAVSPPSPFVALKERSGCGRFRSSRVPSINIPTGCRQGALFPDGSMARSVSVFSP
LEETLRNNNCVPTSGSLPSRLDEAADPLSMDWRLHNPEPVTVPYLSPLVLWKELESLLEN
EGDAVITEADVVDHHPIIYWNLVWYFRRLDLPSNLPGLILTSDHCNRDSQIPRHWMSEDS
KHVLIQILWDNLKLHQDPVQPLYILWNTYNVGYPLSRPVLEEEQPLSEELLQNVVKSIQR
NDLSRPLAQLLQLLGHTLGVKRQRSVYRDVLFLSLVALGKDNIDIDAFDREYKLAYDRLL
PGLVKLTHNCDRPPSTGVMECRRTFGEPYL
NT seq
6033 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagacaaaggccctcgtgtagccgactactttgtggtggccgggctgacggac
ccatccaaaccgctggaccaggagatccactttgatgatgtctgccacaagacggctaaa
ccaaaggcgcccatcaccgacgtggcggtggtgatccgctcgttgggtgaggaggtgcca
ccaggttactgcggcatcgaggagaccccgagcggccactcggctgacctgaacaacggt
ggcctcatggcgccacagatcttcctgtgctacagaaggggtcgtgacaagccgccactg
actgacttgggagtgctgtatgaatggaaggaacggctgaagcagggctgtcatctcatc
cagaccaccccctctggacgcccagccaacatcagcggcaattcctcccagcgcatctac
atcacctaccgcagggcagctgagagccagccccactctgccctcgccgtcaccgacatc
tgcattatcatcccgagcaaaggggagacgcccccacacacattctgcaaggtggacaag
aatctcaacagcagcatgtggggttcctctgtctatctgtgttacaagaagtctgtggcc
aaaaccaacacaatagcctacaaagcaggtttattcagcagatacccagaggaggattac
gagtcgtttcccctaccacagtctgttcctctcttctgccttcccatgggggccacaatt
gaatgctggnccagcaaacccaaatactccctccctgtattttctacatttgtcctcact
ggagcctctggagagaaggtctacggtgccgccattcaattctacgagactttcccgcca
gagtgcctgaacgatcagcagcggtcccagttgagccttccgaacccggacccctgcaga
tcctcgtcctcctgttccgcgtcaacagcagccgacagcaacagcgccgccacccagtgc
tccgtctacaccaacaaatgcatctgcctcctctcccactggccgttctttgacgccttt
cgcaagtttctcacattcctctatcgctactccatctccggccctcacgtgcaacctata
gagaagcatatctctcattttatgcacaaagtccccttcccctcctctcagcgtcctcgt
atcctagttcagctttctcctcacgacagtttgatgttgagccagcccgtttcctctcca
ttaccgctcagcggtggtcgattctcaacgctgctagagaacctcggaccagagaatgcc
gtcaccatgctggtgctcgccgtcaccgaacacaagatcctggtccactcgttgcgacct
gccgtgctgaccagcgtcaccgaggcactcgtgtccatgattttcccgttccactggccg
tgcccgtatattcctctctgcccgctggccttggctgatgttttgagtgccccctgcccg
ttcatcgtgggagttgactcccgctactttgatctgtacgaccccccgcctgatgtgacc
tgtgttgacctggacaccaacaccatcttccataatgaagataagcgagccctcacatgg
aagatcctgccaaagaaagcctgtaaaaacctcatgaatgtgctgagcaacctccaccag
cagctgcttcatggtcagaacgggcctgacggactgctggagctcaacatctgtgacacg
tcagagctgagctgtgggaagagtcttcacacactggagctggagatccaggaggccttc
ctgcgcttcatggccgccatcttgaaagggtaccgatcgttcttacgacccatcactcag
gccccctctgaaaaagccactgacgccagctctctttttgatttgcaaggattcctgaag
agccgtgatcgctcacaccagaagttctactccctgatgaccaaaactcagatgttcatc
cgctttatcgaggagtgctccttcgtcagcgacaaagacgccagcctggctttctttgac
gactgtgtggacaaactctacagttcagagcggagtgcagacagaggcggcaaggtggac
ggtgatcggccggaggaaacccgcctgatagaaattgatgagtcccagcgcagcgagcac
accgtcttcatcacacctccagagctgcctcctctgcctgagggggaggaatatcctctc
tgctacagatatgatgggtttccggttttaagtcttgacctgtttgaccctgtggaaggt
ctgcagaccccttcctcacgcctcgctgccaggcacagctgccccaccagccccgccccc
atgtttagacgcaccaagcaggagatcaaatcagcccagaagatcgcaaagaagtactcc
tccataccccagctatggtccaagtgcctgctccgccactgttacggcctgtggttcatc
tgtctccctgcgtacgtcaaagtgtgccactccaaggtgcgggcgctccgcaccgcctat
gacgtcctcaggaaaatgcaggcgaagaaactgcagccccctgatgaggtgtgttaccgg
gtgctgatgcagctgtgtggacaatatggccaacctgtcctggctgtcagagtcctgttc
gagatgaagaaggctggagttcaccccaatgccatcacgtacggctactataacaaggca
gtgttggagagcacatggccctcaagcaccagaggtggatacttcctgtggatgaagctg
agaaacgtggttttgggtgtggctcagttcaaacgggcgcttcggcgacacgctccgctc
acccagagcccgctgtcagatggcagcgacctggacgctgtgagtcacggcagcctggac
agctctgccgacactaacgcgacggtcgagcagggccccttcgccgccacccccgccaaa
gtagaccccactgatgatagatctagcacagccagccgtgggggcagtaaagtgggtgcc
cactcactctgtggaggctctgagctcaggggagccaccctccacccaggagatcagtca
gatctgggttacaactcactttccaaagaggaggtccggagaggagagcccggacctcag
gagtccatccaggacaaagacgacaagaaggagagcgactgcagctccctgtcggaaaca
gagagcagcagaggaagtaaagactgcctccctcagctggatgcggacgccagctcgtct
ttcaaacctcggggcatcgtccgcagcagcttcccgtacgacgactcttcctgcagaccc
aagagctccgccagcgcaggacatgtggcgggtcttctcttcacgtcctccctggatgag
atcggcgaggtccgaaccagctctctgctcaggagacacaagagcgccctggaggaggtg
gtgggaggcagcagtaacgcagcatacaagtggcagggtttaaggggccgacggctgagt
gacgacccggtaggctgcagcgccgccacggttttgggactgggtttgacccaaggtgaa
actgacccggggaagattgcaggacacctgggagcggatgtgaagattctgtctgacact
agcttcagtaagaaaaagaagcctcggtcgttgtgtctgggtgggtcagagagggcagtg
gtgaacgcgggagcttccagatttcatggccaccaagaggaggaagaggagaccgagggt
caggactcgagtgatgaggacagagctaatccagaagccattttcgatctggaggatctg
gatttagagaaaccgacctcagcggttggcagcagtttgcagaaaaccaacacatctcgt
aggaaacttatggaacacagtggtggctatagcaacatcgagaacgccaaaggagccgtg
aagcgcacagacattgagacaggctacgatcctctgtctctgctggcagctgaacagcaa
acggaggctcagtgctcagaggacaacgatgttggcgcaccgagcacccgcagacacctg
gccagggagatagaactctacatgaaccacatgggcagccctcttagcagccgcacaccc
agtctggacttgcaggacccttccagcccccccctgctccatccctcctccatctctgcc
cctcgccgggccagcctgcccgacagctccccccacaggactgccggagtaccgcgttcc
cgcaccttccacccacaatcgccttcacaaacaccgtcacgtcaacgcctgtggtcttcg
ccttcctgtcgcagctccagcacaaccgccacccccagccccagcccacgacccagtcca
aacagggagagggacaacaggatgggcctggtgtctccatcaccctcatcctcctctttc
actctggacaatctgctcacgccctcgcttgacgtgttcaagacaagtatgttctctgca
ggaaagggcgtggcggagaaggcgagccgctggtactctcgcctggcaacgtacaccaca
ccgaccaaggacggtcacagcgaccgcctgagcgtgtcttccctcagtgttggagaccta
gactgtccctctgctctgggtgaagacggttacagagaacaagagggcgccgcagtctca
cctcagaagaacggcccccgccggagccccaggcgcagccccctccacaaactggaaaac
ccaactcaatgctccagctttgggagacccacatctctgcttcccggtggcgtcctcaca
cctcctggctctcctctgcctgataaatcggacctcagctcatcacgctacaccagcaac
accagcatcttcaacaactacggcatggagctgctgatctccagctgttcccgctgcaag
acatgtgactgcctggtgtatgatgaggaaatcatggctggctggacggctgacgattcc
aacctgaacacaacctgtccgttctgtggaaacccctttctgcccttcctcaacgtggag
atcagagacctgcgaggtcccggccggcttttcctgaaaggaagcccatccgtggatgag
gctgtgacgtcgtcgtgctcggcctccacaggattggacacggggacgtcctccctgtcc
acgccgtgtccaacgacagccgtctccccgccatccccttttgtagctctgaaggagcgt
tcaggatgtgggaggtttcgatccagccgagttccgagtatcaacatccccacaggctgt
cggcagggggcgctgttcccggacgggtccatggctcgcagcgtcagcgtcttcagcccc
ctggaggaaacgctgcgaaacaataactgtgtcccgacgtcaggcagtctgcccagtcgc
ctggacgaagccgctgacccactcagtatggactggaggctccacaaccctgagccggtg
acggttccgtacctgagtccgctggttctgtggaaggagctggagagtctgctggagaac
gagggcgatgctgtcatcacggaggctgacgtggtggaccaccatcccatcatctactgg
aacctggtctggtacttcagacgactggacctgcccagcaacctgcccggtctcatcctc
acctcagaccactgcaacagggactcccagattcctcgtcactggatgtccgaggacagc
aaacacgtgttgatccagattctgtgggacaacctgaagctgcaccaggacccggtccag
cctctctacatcctctggaacacctacaacgtgggctaccctctgtcccggcccgttctg
gaggaggagcagccgctcagcgaggagctgctgcagaacgtggtgaagagcatccagagg
aacgacctgagtcgcccgctggcgcagctgctgcagctgctgggtcacaccctcggggtc
aaacggcaaaggagcgtctacagggacgtcctcttcctctccctggtggctctgggtaaa
gacaacatcgacattgacgccttcgatcgtgaatacaagctggcgtacgaccgcctcctg
ccgggcctggtgaagctgacccataactgtgaccgtcctcccagcacgggggtgatggag
tgccggaggacgttcggagagccttacctgtga
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