Takifugu flavidus (sansaifugu): 130514886
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Entry
130514886 CDS
T09160
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130514886 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfs03009
]
130514886 (tbl3)
Ribosome biogenesis [BR:
tfs03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130514886 (tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
130514886
NCBI-ProteinID:
XP_056870730
LinkDB
All DBs
Position
18:complement(7300508..7308509)
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AA seq
928 aa
AA seq
DB search
MANPHLHFKTNYAVSSKIEPFYKGGKVQISKDENYIFCTCGSRINVLEISTGKIVHSVEH
DDQEDITSFALSSDDELLVTASRALLLKQWDWRQAQCTRSWRAIHTAPVASMDFDSTSTL
LATGGCDGTIKIWDVVKQYCTHNLRGSSGVVHLVQFHPDISRLKLFSSSMDCSIWMWDLS
TSLCVCVLQSHYSAVTSLSFSPDGDTMISSGRDKICTVWDLKQQNAKRAIPVYEAVEGVI
FLPENQDFSQIGVKNPKLHFVTAGSKGILRVWDPNTARCVFSQTLGTVSVKKDDEEGEEE
EKKDDNPRSLTHLLLLPASSRLATVTAEHNIMLYQLAGLATLQQFVGYNDEVLDVKFLGK
DDSHIVVATNSCQLKVFELLTNSCQILYGHTDTVLSLDVFRKGSLFASCAKDRSVCVWQM
DSGHVRCVARGTSHTNAVGCISCSRMKASFVASGSLDCTVKVWDLPADLTAAEESIQQLT
LRTTEKAHDKDVNSVAVSPNDKLLASASQDRTAKLWSLAGEGNLGLLGVFRGHRRGVWTV
CFSPVDQVLATSSADGTTKLWGLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLV
KLWTIKTNECVKTLDAHQDKVWGLHGNRRDNRMVTGSADSNITVWEDVTEMEVAEEQAKQ
EEQILKQQELSNLLQEKKYLKALGLAISLDQPHTVLTVIKAIRQTEDSSELLEKTVLKLR
VDQKEALLRYCGVWNTNAKNCQDAQVVLQVLLTHVPPEELLQYQGARTHLEGLVPYTERH
MQRIGRLLQASMFLNYMWQKMRVVGEPSSMDQDEEMDTSPLVQPFFTIDKDRGDVENREG
EDRDSGQDEDPSSPLEDEEEEDADVSTTRRVSARIRSKEGGKTNGRHPSVSEESSEEEDM
DEEEEQEVAGKAAKRLSASSTLSQTIAS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacccccaccttcacttcaaaacaaattacgctgtttccagcaagattgaacca
ttttacaaaggaggaaaagtgcagatcagcaaagatgaaaattacatcttttgtacgtgt
ggatctcgcatcaacgttttggagatcagcactggaaagattgttcacagcgttgaacat
gatgatcaagaggacatcacatccttcgcactcagcagtgacgatgagctgctggtaaca
gctagccgagctctgctgctgaagcagtgggactggaggcaggctcagtgcacgcgctcg
tggagggccattcacactgcgcctgttgccagcatggactttgattcaacctccaccctc
ttagccaccggcggctgtgatggcaccataaagatctgggacgtggtgaagcagtactgc
acccacaacctgaggggctcatctggtgtcgtacatctggtccagttccacccagacatc
agcaggctgaagctcttctcctcctcaatggactgcagcatttggatgtgggacctgagc
accagcctgtgtgtgtgcgtgttgcagagccactacagcgcagtgacctctctcagcttc
agccccgatggtgacaccatgatcagctcaggcagagataagatctgcacagtgtgggac
ttgaagcaacagaatgccaagagagctataccagtctatgaggcggtggagggtgtcatt
tttcttcctgaaaatcaggatttctctcagatcggagtgaagaaccctaagttgcatttc
gtcactgctggcagcaaaggcatactgagagtgtgggaccccaacacggcgcgttgtgtc
ttcagccagaccctcggcaccgtctcagtgaaaaaggatgacgaggagggggaagaggag
gagaagaaggacgacaacccccgcagtttgacccatctcctcctcctgcctgcctcctca
agactggctacagtcacagcagaacacaacataatgctgtaccagctggctggtctcgcc
acactgcagcagtttgtcggctacaacgacgaggtgctggacgtgaagttcctgggcaaa
gacgacagccacatcgtggtcgccaccaacagctgccagctgaaggtgtttgagctgctc
accaacagctgccagatcctttatggacacacagataccgtcctctcattggatgttttc
aggaagggctctctttttgcaagctgtgcaaaggacaggtcagtttgtgtgtggcagatg
gacagcgggcatgtgcgctgtgtggcccggggcaccagccacaccaatgctgtgggctgc
atctcctgctccaggatgaaagcctcttttgtagcgtctggcagtctggactgtacagtg
aaggtgtgggatcttcctgctgacttgactgcagcagaggagagcatccagcagctgacc
ctccgcaccaccgagaaggctcacgacaaggatgtaaacagtgtggcggtgtcgcccaac
gacaagctgctggcctcggcctcccaggaccgtaccgccaagctgtggtccctggcaggg
gaggggaacctgggcctgctgggggtgttccggggccaccgaaggggtgtctggactgtc
tgtttctctcctgtggaccaggtgctggcaacatcgtcggcggacggcaccaccaaactg
tggggcctgcaggacttcagctgcctgaagacatttgagggccacgacgcatctgttctg
aaggtcatcttcgttagccgaggcactcagctcctcaccagtggttctgatggtttagtg
aagctgtggacgatcaagaccaatgagtgtgtaaagacgctggacgctcatcaggataag
gtgtggggtctccacggcaaccgcagagacaataggatggtgaccggctcggccgactct
aatatcaccgtgtgggaggatgtgactgagatggaggtggcagaagagcaggccaagcag
gaagagcagatactgaagcagcaggaattatccaatctgctccaggaaaagaagtacctg
aaggctctgggtctggcgatctctctggaccagcctcacaccgtgctgactgtcatcaaa
gcaatccgccagacagaggacagcagcgagctgttggagaagactgtgctgaaactgcgg
gtggatcaaaaagaggctctcctgcgatactgcggcgtgtggaacacaaatgccaaaaac
tgccaggacgctcaagtggtcctgcaggtcctcctcacacacgtgccgccagaggagctg
ctgcagtaccagggggcgcggacccacctggagggactcgtcccatacacagagagacac
atgcagaggattggccgtctcctgcaggcgtccatgttcctgaactacatgtggcagaag
atgagagtggtgggagaaccctcaagcatggaccaagatgaggagatggataccagcccg
ttggtgcagcctttcttcacgattgacaaggatagaggagacgttgagaatcgagagggc
gaggacagagacagcggacaggatgaagaccccagctccccgctggaagacgaggaggaa
gaggacgctgatgtcagcaccaccaggagggtttctgcacgaatacggagcaaagagggc
ggcaaaacgaacggccgacatccctctgtcagcgaggagagttcagaagaggaagacatg
gacgaagaggaggagcaggaggtggcgggaaaggcagcgaagcgtctctccgcttcttct
acactatcacagacaatcgccagctga
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