Takifugu flavidus (sansaifugu): 130515046
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Entry
130515046 CDS
T09160
Name
(RefSeq) transcription factor Sox-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130515046
Transcription factors [BR:
tfs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130515046
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130515046
NCBI-ProteinID:
XP_056871007
LinkDB
All DBs
Position
18:8222718..8226124
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AA seq
462 aa
AA seq
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MLKMTEEHDKCVNDQPCSPSGTNSSMSQDESDSDAPSSPTGSDGQGSLLTSLGRKVDSED
DERFPACIRDAVSQVLKGYDWSLVPMPVRGNGSLKNKPHVKRPMNAFMVWAQAARRKLAD
QYPHLHNAELSKTLGKLWRLLSESEKRPFVDEAERLRIQHKKDHPDYKYQPRRRKNAKPG
QSDSDSGAELAHHMYKAEPGMGGLAGLTDAHHHAEHAGQPQGPPTPPTTPKTDLHHGMKQ
DLKHEGRRLVDSGRQNIDFSNVDISELSTDVISNMETFDVHEFDQYLPLNGHTSSSSGLP
SDQPPAPVGSYASSYGHAGINGSAWSRKGAMSSSSPSSGEVGQHRLQIKTEQLSPSHYSE
HSHRSPPHSDYGSYSSPACVTSATSAASVPFSGSQCDYSDIQSTNYYNPYSSYSSGLYQY
PYFHSSRRPYGSPILNSLSMAPAHSPTGSGWDQPVYTTLSRP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaatgacagaggagcatgacaagtgtgtcaacgatcagccctgcagcccgtcc
ggcaccaacagctccatgtcccaggacgaatccgactccgacgctccgtcctctccgacg
ggctccgacggtcaggggtcgctgctcactagcttgggaaggaaagtggattccgaggat
gacgagcggttcccggcttgcatccgtgacgccgtctctcaggtcctgaagggttacgac
tggtccctggtgccgatgcccgtgagggggaacggatctctgaagaataaacctcacgtc
aagagacccatgaacgcgttcatggtttgggcgcaggcggcccgcaggaagctggcggat
cagtacccgcacttgcacaacgccgaactgagcaagacgctggggaaactgtggcgtttg
ctctcggagagcgagaagaggccgttcgtcgatgaggcggagaggcttcgcattcagcac
aagaaagatcacccggactacaagtaccagccccggcgacggaagaatgcgaagccgggc
cagagcgactcggactccggggcagaactcgcccaccacatgtataaagctgagccgggc
atgggaggactggcagggttaactgatgctcaccaccacgctgaacacgcagggcagccc
caaggcccccccacacctcccacgacccctaaaacggaccttcaccacggcatgaagcag
gatctgaaacacgaaggtcgccgccttgtcgacagcggcaggcagaacatcgacttcagt
aacgtggacatctccgagctcagcaccgacgtcatcagcaacatggagacctttgacgtg
cacgagttcgaccagtacctcccgcttaacggccacacttcgagctcctccggcctgcct
tcagaccagcctccggcacccgttggttcttacgcctcctcttacggccacgcaggcatc
aacggttcggcgtggagccgcaagggcgcaatgtcctcgtcctccccttcatctggagag
gtgggccagcaccggctccagatcaaaacggagcagctgagcccgagccactacagcgag
cactctcacaggtccccgcctcactccgactacggctcctacagcagcccggcctgcgtg
acctctgccacgtcagccgcctcggtgccgttctcgggctcccagtgtgactattctgac
atccagagcaccaactattacaacccctactccagctactcctccggcctctaccagtac
ccttacttccactcctccaggagaccctacggcagccccatcctcaacagcctgtccatg
gctcctgctcacagccccaccggctccggctgggaccagcctgtctacaccaccctgtcc
cggccttaa
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