Takifugu flavidus (sansaifugu): 130515178
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Entry
130515178 CDS
T09160
Name
(RefSeq) general transcription factor IIF subunit 1-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130515178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfs03021
]
130515178
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
130515178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
130515178
NCBI-ProteinID:
XP_056871253
LinkDB
All DBs
Position
18:complement(6339575..6342985)
Genome browser
AA seq
534 aa
AA seq
DB search
MTSLGNSSSSVTEYTVRVPKNTGKKYNIMAFNVGDKVNCSTWTQARMERDLSARRIYGEE
EAPESGAGSEFGKKQREESRRKKFGIVTREFKAEDQPWILKVNGKGGRRFKGQRKGGVTE
NASYYIFTQCADGVFEAFPVNSWYNFTPISKHRTLTAEEAEEEWSRRNKVVNHFSIMLQR
RLREDQGEDEEEESEKSGKKKKGGRKGGDLRIHDLEEELEMSSEDSDWSAGEEGENKKPK
KTSVKGKGKKKKRKDDSEALEDSDDGDYEGLEVDYMSDESSSEEEPEKGKPNKGEDVPKG
IDEASESEEESEEEKQNSEEAKEEEEEEEGKKTPVQLEKKKKKDSSGESDSSDDSDIEGE
ATSALFMKKRTPPKRGGGRGSAGSSRTGSRPGTPSIDSASTSNTLRAAASKLEQGAGKLI
KASKRQAPGPDCPAAKRLKMEPSSQSPGPSGKSTPQPPSGKSTPSSSDIQLTEDAVRRYL
IRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLME
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccttgggaaacagcagttcatcagtcacagaatacacagtccgagttccaaaa
aacactggcaagaaatacaatattatggctttcaatgttggggacaaggtcaactgttca
acatggacacaggctcgtatggagagagacctgagtgctcgtcggatctatggagaggag
gaggcgccagaaagtggagctggtagtgagtttggcaaaaagcagcgtgaagaatctcgg
cgaaagaagtttggcattgtgacacgtgagttcaaagcggaggaccagccctggattctc
aaagtcaatggaaaagggggcaggaggttcaaaggccaaaggaagggcggggtcacagaa
aatgcgtcctactacatcttcacacagtgtgctgatggggtgtttgaggccttcccggtt
aacagctggtacaacttcacaccgatatccaagcacaggactctgacagcagaggaggct
gaggaagagtggagcaggaggaacaaagtggtgaaccatttcagcatcatgctccagcga
aggttgcgtgaggaccagggcgaggatgaggaagaggagagtgagaagtctggaaagaag
aagaagggtggcagaaaggggggtgacctgcgcattcatgacctggaggaagaactggag
atgagcagcgaggacagtgactggagtgctggagaagagggagaaaacaagaaacctaaa
aaaacctcagtcaaagggaaagggaagaagaagaagaggaaggatgacagtgaggctctg
gaggacagtgatgatggtgattatgagggcctggaggtggattacatgtctgatgaaagc
agctcagaggaagaaccagaaaaaggaaaacccaacaaaggagaggacgtccctaaagga
atagatgaggcgtcagaaagtgaggaagagagtgaggaggagaagcagaacagcgaggaa
gccaaagaggaggaggaagaggaggaaggaaagaaaactccagtccagttggagaaaaag
aagaaaaaagacagcagtggcgagtcggacagctcggacgacagtgacattgagggagag
gcgacctcagctctcttcatgaagaagcgcacccccccaaaacgtggaggtggccgcggt
tccgcaggcagctccaggaccggcagtcgcccagggacaccgtctatagactctgcctcc
acctccaatacgctccgagctgctgccagcaagctggaacaaggtgccgggaagctgatt
aaagccagtaagaggcaggctcctggccccgactgtccagctgccaaaagactgaaaatg
gaacccagcagtcagagcccagggccgtctggaaagagcaccccacaacccccatcaggc
aaatctactcccagctcaagcgacattcagctgacggaagatgccgtccgacggtaccta
atccggaaaccgatgaccactaaagacctcctgaagaagttccagacaaagcgcacgggg
ctgagcagcgagcagaccgtcaatgtcctggcacagatcctgaagcggctcaacccagag
cgaaaaaacgttaatgacaagatgcacttttacctgatggagtaa
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