Takifugu flavidus (sansaifugu): 130515249
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Entry
130515249 CDS
T09160
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04120
Ubiquitin mediated proteolysis
tfs04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130515249 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130515249 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130515249 (mgrn1b)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130515249 (mgrn1b)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130515249 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
130515249
NCBI-ProteinID:
XP_056871385
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All DBs
Position
18:complement(9450604..9456443)
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AA seq
546 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTPVEDGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKSPSLVSETVHYKRGVSQQFSMPSFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSTDSVPP
GFEPISLLEALNGLRSVSPGIPSAPLYEEINFSGGLGGESRQLSSPEHLSDSSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTDATATEDVAESLSPDDEDR
LHSGGEVLQDCSSEHSSLTKTESDPQGDLSLPGSSESLKSHSTNCSSQPLLCPSSSLHME
DEHLDP
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatcctgagtcgcagaatcgctggtgtcgaggatattgacatccaggctaat
tcggcctatcgattcccaccgaaatctgggaattattttgcaagccactttttcatgggg
ggagagaagtttgacacgccacatccagagggatacctctttggagaaaacatggacctc
aattttctgggaaaccggccagtgcagtttccatacgtgacacctgcgcctcacgagccc
gtgaagactctgaggagtctggtcaacattagaaaagactctctgcggttggtcaggtat
aaagatgactctgacacgcccgtggaggacggtgggaaaccaaaggtccagtatggcgtg
gagttcacctttgacgctgacgcgcgagtggccatcaccctctattgtcaagcattcgag
gagttttccaacggcatggcagtgtacagcccaaagagcccgtcactggtctctgagacc
gtgcactataagcggggggtcagccagcagttctccatgccctcttttaaaattgacttc
agcgagtggaaagaagaagacctgaactttgacctcgatcggggggtgtttcccatggtt
atccaggctgtggttgacgaaggggacgactgtcttggacacgctcatgtacttttggca
gcctttgagaggcacgttgatggcagcttctccgtcaagccattgaagcagaaacaaatc
gtggaccgcgtgagctacctcttacaggagatttatgggatcgagaacaaaaacaaccaa
gaaacaaagccgtcagatgatgagaacagcgacaacagcagcgagtgcgttgtgtgtctg
tcggacctgcgagacaccctcatcctgccctgcagacacctgtgtctctgcaactcctgc
gcagacacgctgcgttaccaggccaacaactgtcccatctgcaggctgccctttagggcc
ttgcttcagatcagagctgtgaggaagaagcccggagctctctcccctgtttcattcagc
cctgttctggctcagactatggaccacgatgagcactcgagcactgactcggttcctccg
ggattcgaacccatctctctcctggaggcactgaacggccttcggtcggtgtccccgggc
atcccctccgctcctctctacgaagaaatcaacttctcgggcggtctgggaggagagagc
agacagctgagctccccggaacatctaagcgacagtagtttgcagaaaggaaaagtcagc
aagtcaccagacagcaccctcaggtctccgtcctcccccatccaggaggaagatgaagag
aagctctccgagatgtctgatgctcaaccgcacacgttgctgtccagcagccccgccccc
acggacgccacagccaccgaggacgtggcggagtccctgtctcctgacgatgaggacagg
ctgcattccggaggagaggtcttacaggactgcagcagcgagcacagcagtttgaccaaa
acggagagcgacccacagggcgacctgtctctgccagggtcctcggaaagcctgaaaagt
catagcacaaactgctccagccagccgctcctgtgtccctccagcagcctccacatggag
gacgagcatctcgacccgtga
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